RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 RPL9P32969 192 aaKnown RBP17.01■□□□□ 0.31
SCN3B-202ENST00000392770 CSHL1Q14406 222 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 TTLL9Q3SXZ7 439 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 C6orf10Q5SRN2 563 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 HGSNATQ68CP4 663 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 DLK2Q6UY11 383 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 ILDR2Q71H61 639 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 ZBTB10Q96DT7 871 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 CCDC126Q96EE4 140 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 MBOAT7Q96N66 472 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 ST6GALNAC4Q9H4F1 302 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 DHX33Q9H6R0 707 aaKnown RBP17.01■□□□□ 0.31
SCN3B-202ENST00000392770 CRYBG1Q9Y4K1 1723 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 B4GALT4O60513 344 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 SMPD1P17405 629 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 TBC1D19Q8N5T2 526 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 PCYOX1LQ8NBM8 494 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 MYCBPQ99417 103 aaPredicted RBP17.01■□□□□ 0.31
SCN3B-202ENST00000392770 NMRK2Q9NPI5 230 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 FAM105AQ9NUU6 356 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 DNAJC16Q9Y2G8 782 aa17.01■□□□□ 0.31
SCN3B-202ENST00000392770 TUFMP49411 452 aaKnown RBP17■□□□□ 0.31
SCN3B-202ENST00000392770 KCNK10P57789 538 aa17■□□□□ 0.31
SCN3B-202ENST00000392770 TMEM259Q4ZIN3 620 aa17■□□□□ 0.31
SCN3B-202ENST00000392770 ZC3H12AQ5D1E8 599 aaKnown RBP17■□□□□ 0.31
SCN3B-202ENST00000392770 C16orf59Q7L2K0 433 aa17■□□□□ 0.31
SCN3B-202ENST00000392770 LRRC52Q8N7C0 313 aa17■□□□□ 0.31
SCN3B-202ENST00000392770 MAML3Q96JK9 1138 aa17■□□□□ 0.31
SCN3B-202ENST00000392770 TSPAN18Q96SJ8 248 aa17■□□□□ 0.31
SCN3B-202ENST00000392770 EMILIN2Q9BXX0 1053 aa17■□□□□ 0.31
SCN3B-202ENST00000392770 ING2Q9H160 280 aa17■□□□□ 0.31
SCN3B-202ENST00000392770 ATXN3LQ9H3M9 355 aa17■□□□□ 0.31
SCN3B-202ENST00000392770 GPAMQ9HCL2 828 aa17■□□□□ 0.31
SCN3B-202ENST00000392770 WRAP73Q9P2S5 460 aaPredicted RBP17■□□□□ 0.31
SCN3B-202ENST00000392770 OR12D3Q9UGF7 316 aa17■□□□□ 0.31
SCN3B-202ENST00000392770 TCN1P20061 433 aaPredicted RBP17■□□□□ 0.31
SCN3B-202ENST00000392770 PDE1CQ14123 709 aaPredicted RBP17■□□□□ 0.31
SCN3B-202ENST00000392770 TOP6BLQ8N6T0 577 aa17■□□□□ 0.31
SCN3B-202ENST00000392770 NRBF2Q96F24 287 aa17■□□□□ 0.31
SCN3B-202ENST00000392770 TMEM120AQ9BXJ8 343 aa17■□□□□ 0.31
SCN3B-202ENST00000392770 IL1RL2Q9HB29 575 aa17■□□□□ 0.31
SCN3B-202ENST00000392770 UXTQ9UBK9 157 aaPredicted RBP17■□□□□ 0.31
SCN3B-202ENST00000392770 JAG1P78504 1218 aa17■□□□□ 0.31
SCN3B-202ENST00000392770 MBTD1Q05BQ5 628 aa17■□□□□ 0.31
SCN3B-202ENST00000392770 CPNE1Q99829 537 aa17■□□□□ 0.31
SCN3B-202ENST00000392770 NOGQ13253 232 aa17■□□□□ 0.31
SCN3B-202ENST00000392770 PKN2Q16513 984 aaKnown RBP17■□□□□ 0.31
SCN3B-202ENST00000392770 UNKQ9C0B0 810 aaKnown RBP17■□□□□ 0.31
SCN3B-202ENST00000392770 PRDM16Q9HAZ2 1276 aa17■□□□□ 0.31
SCN3B-202ENST00000392770 ACOT9Q9Y305 439 aa17■□□□□ 0.31
SCN3B-202ENST00000392770 TSPAN1O60635 241 aa17■□□□□ 0.31
SCN3B-202ENST00000392770 FKTNO75072 461 aa17■□□□□ 0.31
SCN3B-202ENST00000392770 DARSP14868 501 aaKnown RBP17■□□□□ 0.31
SCN3B-202ENST00000392770 CPA3P15088 417 aa17■□□□□ 0.31
SCN3B-202ENST00000392770 LRRC19Q9H756 370 aa17■□□□□ 0.31
SCN3B-202ENST00000392770 hCG_1818297A0A087WSY0 165 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 DDX5P17844 614 aaKnown RBP16.99■□□□□ 0.31
SCN3B-202ENST00000392770 ITGALP20701 1170 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 ZNF467Q7Z7K2 595 aaPredicted RBP16.99■□□□□ 0.31
SCN3B-202ENST00000392770 MRGBPQ9NV56 204 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 CNTNAP1P78357 1384 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 EIF4E1BA6NMX2 242 aaKnown RBP16.99■□□□□ 0.31
SCN3B-202ENST00000392770 CHADO15335 359 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 SERPINF2P08697 491 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 WEE1P30291 646 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 ZNF135P52742 658 aaPredicted RBP16.99■□□□□ 0.31
SCN3B-202ENST00000392770 GRIK3Q13003 919 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 SLC35G1Q2M3R5 365 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 SETD3Q86TU7 594 aaPredicted RBP16.99■□□□□ 0.31
SCN3B-202ENST00000392770 FTHL17Q9BXU8 183 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 SERPINB5P36952 375 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 COPAP53621 1224 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 AQP5P55064 265 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 PARP6Q2NL67 630 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 PRELID2Q8N945 189 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 RNF157Q96PX1 679 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 CLPBQ9H078 707 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 SLC40A1Q9NP59 571 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 ZNF214Q9UL59 606 aaPredicted RBP16.99■□□□□ 0.31
SCN3B-202ENST00000392770 ELNP15502 786 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 SOX11P35716 441 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 AMPD2Q01433 879 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 SPDYE7PQ495Y7 208 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 N4BP2L1Q5TBK1 243 aaPredicted RBP16.99■□□□□ 0.31
SCN3B-202ENST00000392770 LAYNQ6UX15 382 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.99■□□□□ 0.31
SCN3B-202ENST00000392770 APOPT1Q96IL0 206 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 TRIM45Q9H8W5 580 aaPredicted RBP16.99■□□□□ 0.31
SCN3B-202ENST00000392770 MYO1HQ8N1T3 1032 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 LENG1Q96BZ8 264 aaPredicted RBP16.99■□□□□ 0.31
SCN3B-202ENST00000392770 C17orf80Q9BSJ5 609 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 NRDE2Q9H7Z3 1164 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 YY1AP1Q9H869 796 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 CTNNAL1Q9UBT7 734 aa16.99■□□□□ 0.31
SCN3B-202ENST00000392770 LOC102724159A0A0B4J2E5 919 aa16.98■□□□□ 0.31
SCN3B-202ENST00000392770 TREHO43280 583 aa16.98■□□□□ 0.31
SCN3B-202ENST00000392770 DAB1O75553 588 aa16.98■□□□□ 0.31
SCN3B-202ENST00000392770 PWP2Q15269 919 aaKnown RBP16.98■□□□□ 0.31
SCN3B-202ENST00000392770 DCLRE1AQ6PJP8 1040 aa16.98■□□□□ 0.31
SCN3B-202ENST00000392770 TDRD5Q8NAT2 981 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms