RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 MICALCLQ6ZW33 695 aa18.76■□□□□ 0.59
ACTN4-202ENST00000390009 ZNF534Q76KX8 674 aa18.76■□□□□ 0.59
ACTN4-202ENST00000390009 CCNYQ8ND76 341 aa18.76■□□□□ 0.59
ACTN4-202ENST00000390009 DQX1Q8TE96 717 aaKnown RBP18.76■□□□□ 0.59
ACTN4-202ENST00000390009 SEC16BQ96JE7 1060 aa18.76■□□□□ 0.59
ACTN4-202ENST00000390009 FAM193BQ96PV7 902 aaPredicted RBP18.76■□□□□ 0.59
ACTN4-202ENST00000390009 SMC6Q96SB8 1091 aa18.76■□□□□ 0.59
ACTN4-202ENST00000390009 FERMT1Q9BQL6 677 aa18.76■□□□□ 0.59
ACTN4-202ENST00000390009 TRIM62Q9BVG3 475 aa18.76■□□□□ 0.59
ACTN4-202ENST00000390009 TMEM161AQ9NX61 479 aa18.76■□□□□ 0.59
ACTN4-202ENST00000390009 PRG3Q9Y2Y8 225 aaPredicted RBP18.76■□□□□ 0.59
ACTN4-202ENST00000390009 VGLL3A8MV65 326 aa18.76■□□□□ 0.59
ACTN4-202ENST00000390009 RNF103O00237 685 aa18.76■□□□□ 0.59
ACTN4-202ENST00000390009 FKTNO75072 461 aa18.76■□□□□ 0.59
ACTN4-202ENST00000390009 SPAG7O75391 227 aa18.76■□□□□ 0.59
ACTN4-202ENST00000390009 STK10O94804 968 aaKnown RBP18.76■□□□□ 0.59
ACTN4-202ENST00000390009 VIMP08670 466 aaKnown RBP18.76■□□□□ 0.59
ACTN4-202ENST00000390009 MSH2P43246 934 aa18.76■□□□□ 0.59
ACTN4-202ENST00000390009 MAGEA3P43357 314 aa18.76■□□□□ 0.59
ACTN4-202ENST00000390009 IFRD2Q12894 506 aaPredicted RBP18.76■□□□□ 0.59
ACTN4-202ENST00000390009 SLC39A12Q504Y0 691 aa18.76■□□□□ 0.59
ACTN4-202ENST00000390009 TP53INP2Q8IXH6 220 aa18.76■□□□□ 0.59
ACTN4-202ENST00000390009 GDAP1Q8TB36 358 aa18.76■□□□□ 0.59
ACTN4-202ENST00000390009 ZNF296Q8WUU4 475 aaPredicted RBP18.76■□□□□ 0.59
ACTN4-202ENST00000390009 DCAKDQ8WVC6 231 aa18.76■□□□□ 0.59
ACTN4-202ENST00000390009 CFAP36Q96G28 342 aa18.76■□□□□ 0.59
ACTN4-202ENST00000390009 GGA2Q9UJY4 613 aa18.76■□□□□ 0.59
ACTN4-202ENST00000390009 SHROOM3Q8TF72 1996 aa18.75■□□□□ 0.59
ACTN4-202ENST00000390009 A0A1W2PPM1 405 aa18.75■□□□□ 0.59
ACTN4-202ENST00000390009 ANKRD65E5RJM6 399 aa18.75■□□□□ 0.59
ACTN4-202ENST00000390009 PRPF4O43172 522 aaKnown RBP eCLIP18.75■□□□□ 0.591e-7■■■■□ 25
ACTN4-202ENST00000390009 OAZ2O95190 189 aa18.75■□□□□ 0.59
ACTN4-202ENST00000390009 FDFT1P37268 417 aa18.75■□□□□ 0.59
ACTN4-202ENST00000390009 APLP1P51693 650 aa18.75■□□□□ 0.59
ACTN4-202ENST00000390009 PDZD4Q76G19 769 aaPredicted RBP18.75■□□□□ 0.59
ACTN4-202ENST00000390009 BEND5Q7L4P6 421 aa18.75■□□□□ 0.59
ACTN4-202ENST00000390009 CACNA2D3Q8IZS8 1091 aa18.75■□□□□ 0.59
ACTN4-202ENST00000390009 C4orf33Q8N1A6 199 aa18.75■□□□□ 0.59
ACTN4-202ENST00000390009 COLGALT1Q8NBJ5 622 aa18.75■□□□□ 0.59
ACTN4-202ENST00000390009 CKAP2Q8WWK9 683 aa18.75■□□□□ 0.59
ACTN4-202ENST00000390009 LRRC39Q96DD0 335 aa18.75■□□□□ 0.59
ACTN4-202ENST00000390009 OR12D3Q9UGF7 316 aa18.75■□□□□ 0.59
ACTN4-202ENST00000390009 ZC3H7BQ9UGR2 993 aaKnown RBP18.75■□□□□ 0.59
ACTN4-202ENST00000390009 TET1Q8NFU7 2136 aa18.75■□□□□ 0.59
ACTN4-202ENST00000390009 TNFRSF10BO14763 440 aa18.74■□□□□ 0.59
ACTN4-202ENST00000390009 OPHN1O60890 802 aa18.74■□□□□ 0.59
ACTN4-202ENST00000390009 NBNO60934 754 aa18.74■□□□□ 0.59
ACTN4-202ENST00000390009 STX2P32856 288 aa18.74■□□□□ 0.59
ACTN4-202ENST00000390009 KBTBD12Q3ZCT8 623 aa18.74■□□□□ 0.59
ACTN4-202ENST00000390009 RNF34Q969K3 372 aa18.74■□□□□ 0.59
ACTN4-202ENST00000390009 SGSM3Q96HU1 749 aa18.74■□□□□ 0.59
ACTN4-202ENST00000390009 ZCWPW1Q9H0M4 648 aa18.74■□□□□ 0.59
ACTN4-202ENST00000390009 SEPT10Q9P0V9 454 aa18.74■□□□□ 0.59
ACTN4-202ENST00000390009 SNX10Q9Y5X0 201 aa18.74■□□□□ 0.59
ACTN4-202ENST00000390009 ATXN2Q99700 1313 aaKnown RBP18.74■□□□□ 0.59
ACTN4-202ENST00000390009 F5H423 210 aaPredicted RBP18.74■□□□□ 0.59
ACTN4-202ENST00000390009 IGLV3-25P01717 112 aa18.74■□□□□ 0.59
ACTN4-202ENST00000390009 COL6A1P12109 1028 aa18.74■□□□□ 0.59
ACTN4-202ENST00000390009 VEGFBP49765 207 aa18.74■□□□□ 0.59
ACTN4-202ENST00000390009 CDK7P50613 346 aa18.74■□□□□ 0.59
ACTN4-202ENST00000390009 ZNF135P52742 658 aaPredicted RBP18.74■□□□□ 0.59
ACTN4-202ENST00000390009 WASHC5Q12768 1159 aa18.74■□□□□ 0.59
ACTN4-202ENST00000390009 ARHGEF6Q15052 776 aa18.74■□□□□ 0.59
ACTN4-202ENST00000390009 MZB1Q8WU39 189 aa18.74■□□□□ 0.59
ACTN4-202ENST00000390009 EPAS1Q99814 870 aa18.74■□□□□ 0.59
ACTN4-202ENST00000390009 CEP41Q9BYV8 373 aa18.74■□□□□ 0.59
ACTN4-202ENST00000390009 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.74■□□□□ 0.591e-7■■■■■ 28.5
ACTN4-202ENST00000390009 XAB2Q9HCS7 855 aaKnown RBP18.74■□□□□ 0.59
ACTN4-202ENST00000390009 ABI2Q9NYB9 513 aaPredicted RBP18.74■□□□□ 0.59
ACTN4-202ENST00000390009 SMG5Q9UPR3 1016 aaKnown RBP18.74■□□□□ 0.59
ACTN4-202ENST00000390009 TTLL3Q9Y4R7 772 aa18.74■□□□□ 0.59
ACTN4-202ENST00000390009 RAD54BQ9Y620 910 aa18.74■□□□□ 0.59
ACTN4-202ENST00000390009 TADA2AO75478 443 aa18.73■□□□□ 0.59
ACTN4-202ENST00000390009 GRIA1P42261 906 aa18.73■□□□□ 0.59
ACTN4-202ENST00000390009 SLC18A1P54219 525 aa18.73■□□□□ 0.59
ACTN4-202ENST00000390009 BFSP2Q13515 415 aa18.73■□□□□ 0.59
ACTN4-202ENST00000390009 GPNMBQ14956 572 aa18.73■□□□□ 0.59
ACTN4-202ENST00000390009 C6orf89Q6UWU4 347 aa18.73■□□□□ 0.59
ACTN4-202ENST00000390009 SCN4BQ8IWT1 228 aa18.73■□□□□ 0.59
ACTN4-202ENST00000390009 FAM126BQ8IXS8 530 aa18.73■□□□□ 0.59
ACTN4-202ENST00000390009 DCP1BQ8IZD4 617 aaKnown RBP18.73■□□□□ 0.59
ACTN4-202ENST00000390009 ABI1Q8IZP0 508 aa18.73■□□□□ 0.59
ACTN4-202ENST00000390009 NPWQ8N729 165 aa18.73■□□□□ 0.59
ACTN4-202ENST00000390009 DBF4BQ8NFT6 615 aa18.73■□□□□ 0.59
ACTN4-202ENST00000390009 SIGLEC10Q96LC7 697 aa18.73■□□□□ 0.59
ACTN4-202ENST00000390009 NSRP1Q9H0G5 558 aaKnown RBP18.73■□□□□ 0.59
ACTN4-202ENST00000390009 ABCC13Q9NSE7 274 aa18.73■□□□□ 0.59
ACTN4-202ENST00000390009 TCP11X1B4DZS4 312 aa18.73■□□□□ 0.59
ACTN4-202ENST00000390009 ENPP3O14638 875 aa18.73■□□□□ 0.59
ACTN4-202ENST00000390009 LRIG2O94898 1065 aa18.73■□□□□ 0.59
ACTN4-202ENST00000390009 CPP00450 1065 aa18.73■□□□□ 0.59
ACTN4-202ENST00000390009 KRT4P19013 534 aa18.73■□□□□ 0.59
ACTN4-202ENST00000390009 PRMT2P55345 433 aa18.73■□□□□ 0.59
ACTN4-202ENST00000390009 WDR4P57081 412 aaKnown RBP18.73■□□□□ 0.59
ACTN4-202ENST00000390009 SARNPP82979 210 aaKnown RBP18.73■□□□□ 0.59
ACTN4-202ENST00000390009 EIF4EBP2Q13542 120 aaPredicted RBP18.73■□□□□ 0.59
ACTN4-202ENST00000390009 BTBD8Q5XKL5 378 aa18.73■□□□□ 0.59
ACTN4-202ENST00000390009 PRPF39Q86UA1 669 aaKnown RBP18.73■□□□□ 0.59
ACTN4-202ENST00000390009 ZNF567Q8N184 647 aa18.73■□□□□ 0.59
ACTN4-202ENST00000390009 SLC44A1Q8WWI5 657 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms