RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 WDR83Q9BRX9 315 aaKnown RBP26■■□□□ 1.75
SHOX2-201ENST00000389589 SMOC2Q9H3U7 446 aa26■■□□□ 1.75
SHOX2-201ENST00000389589 FBXO44Q9H4M3 255 aa26■■□□□ 1.75
SHOX2-201ENST00000389589 OR12D3Q9UGF7 316 aa26■■□□□ 1.75
SHOX2-201ENST00000389589 TEX264Q9Y6I9 313 aa26■■□□□ 1.75
SHOX2-201ENST00000389589 IRAK2O43187 625 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 GCAP28676 217 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 SLC11A1P49279 550 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 GATMP50440 423 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 AP1B1Q10567 949 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 IFRD2Q12894 506 aaPredicted RBP25.99■■□□□ 1.75
SHOX2-201ENST00000389589 SEMA5AQ13591 1074 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 ANKRD20A2Q5SQ80 823 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 ANKRD20A1Q5TYW2 823 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 ANKRD20A3Q5VUR7 823 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 CAPN12Q6ZSI9 719 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 CCDC33Q8N5R6 958 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 BRD8Q9H0E9 1235 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 ACSS3Q9H6R3 686 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 MARCH5Q9NX47 278 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 TBK1Q9UHD2 729 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 RABGEF1Q9UJ41 708 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 SCML2Q9UQR0 700 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 OPHN1O60890 802 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 METTL18O95568 372 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 SSTR1P30872 391 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 ELK3P41970 407 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 TCTN1Q2MV58 587 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 FAXCQ5TGI0 409 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 CYP4X1Q8N118 509 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 MAML1Q92585 1016 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 LRRC39Q96DD0 335 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 XPO6Q96QU8 1125 aaKnown RBP25.99■■□□□ 1.75
SHOX2-201ENST00000389589 GPR62Q9BZJ7 368 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 PRDM12Q9H4Q4 367 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 PPANQ9NQ55 473 aaKnown RBP25.99■■□□□ 1.75
SHOX2-201ENST00000389589 ARHGEF38Q9NXL2 777 aa25.99■■□□□ 1.75
SHOX2-201ENST00000389589 MYO18AQ92614 2054 aaKnown RBP25.98■■□□□ 1.75
SHOX2-201ENST00000389589 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.98■■□□□ 1.75
SHOX2-201ENST00000389589 POC1B-GALNT4F8VUJ3 575 aa25.98■■□□□ 1.75
SHOX2-201ENST00000389589 GEMIN4P57678 1058 aaKnown RBP25.98■■□□□ 1.75
SHOX2-201ENST00000389589 TMED2Q15363 201 aa25.98■■□□□ 1.75
SHOX2-201ENST00000389589 SLC39A5Q6ZMH5 540 aa25.98■■□□□ 1.75
SHOX2-201ENST00000389589 SCD5Q86SK9 330 aa25.98■■□□□ 1.75
SHOX2-201ENST00000389589 ARHGAP18Q8N392 663 aa25.98■■□□□ 1.75
SHOX2-201ENST00000389589 CCNYQ8ND76 341 aa25.98■■□□□ 1.75
SHOX2-201ENST00000389589 P2RY11Q96G91 374 aa25.98■■□□□ 1.75
SHOX2-201ENST00000389589 SCLYQ96I15 445 aa25.98■■□□□ 1.75
SHOX2-201ENST00000389589 INTS9Q9NV88 658 aaKnown RBP25.98■■□□□ 1.75
SHOX2-201ENST00000389589 CHMP2BQ9UQN3 213 aa25.98■■□□□ 1.75
SHOX2-201ENST00000389589 GMNCA6NCL1 334 aa25.97■■□□□ 1.75
SHOX2-201ENST00000389589 NDUFAB1O14561 156 aa25.97■■□□□ 1.75
SHOX2-201ENST00000389589 AMHP03971 560 aa25.97■■□□□ 1.75
SHOX2-201ENST00000389589 SERPINB6P35237 376 aa25.97■■□□□ 1.75
SHOX2-201ENST00000389589 CDK16Q00536 496 aa25.97■■□□□ 1.75
SHOX2-201ENST00000389589 FUT10Q6P4F1 479 aa25.97■■□□□ 1.75
SHOX2-201ENST00000389589 MON1AQ86VX9 555 aa25.97■■□□□ 1.75
SHOX2-201ENST00000389589 NLRP14Q86W24 1093 aa25.97■■□□□ 1.75
SHOX2-201ENST00000389589 HAPLN3Q96S86 360 aa25.97■■□□□ 1.75
SHOX2-201ENST00000389589 OXCT2Q9BYC2 517 aaPredicted RBP25.97■■□□□ 1.75
SHOX2-201ENST00000389589 PSMC3IPQ9P2W1 217 aaPredicted RBP25.97■■□□□ 1.75
SHOX2-201ENST00000389589 TBKBP1A7MCY6 615 aa25.97■■□□□ 1.75
SHOX2-201ENST00000389589 HTR7P34969 479 aa25.97■■□□□ 1.75
SHOX2-201ENST00000389589 HNRNPH2P55795 449 aaKnown RBP25.97■■□□□ 1.75
SHOX2-201ENST00000389589 SARNPP82979 210 aaKnown RBP25.97■■□□□ 1.75
SHOX2-201ENST00000389589 SMARCB1Q12824 385 aa25.97■■□□□ 1.75
SHOX2-201ENST00000389589 SYCP2LQ5T4T6 812 aa25.97■■□□□ 1.75
SHOX2-201ENST00000389589 TOX2Q96NM4 488 aa25.97■■□□□ 1.75
SHOX2-201ENST00000389589 XAB2Q9HCS7 855 aaKnown RBP25.97■■□□□ 1.75
SHOX2-201ENST00000389589 H7C4K7 107 aa25.96■■□□□ 1.75
SHOX2-201ENST00000389589 RNF103O00237 685 aa25.96■■□□□ 1.75
SHOX2-201ENST00000389589 MX2P20592 715 aa25.96■■□□□ 1.75
SHOX2-201ENST00000389589 ATN1P54259 1190 aaPredicted RBP25.96■■□□□ 1.75
SHOX2-201ENST00000389589 CAND1Q86VP6 1230 aaKnown RBP25.96■■□□□ 1.75
SHOX2-201ENST00000389589 FBF1Q8TES7 1133 aa25.96■■□□□ 1.75
SHOX2-201ENST00000389589 SENP1Q9P0U3 644 aa25.96■■□□□ 1.75
SHOX2-201ENST00000389589 LRIG2O94898 1065 aa25.95■■□□□ 1.75
SHOX2-201ENST00000389589 FAM107AO95990 144 aa25.95■■□□□ 1.75
SHOX2-201ENST00000389589 GALTP07902 379 aa25.95■■□□□ 1.75
SHOX2-201ENST00000389589 CCR1P32246 355 aa25.95■■□□□ 1.75
SHOX2-201ENST00000389589 PPP2R5DQ14738 602 aa25.95■■□□□ 1.75
SHOX2-201ENST00000389589 LRRC43Q8N309 656 aa25.95■■□□□ 1.75
SHOX2-201ENST00000389589 ATXN2LQ8WWM7 1075 aaKnown RBP25.95■■□□□ 1.75
SHOX2-201ENST00000389589 BRAFP15056 766 aa25.95■■□□□ 1.74
SHOX2-201ENST00000389589 EPHB2P29323 1055 aa25.95■■□□□ 1.74
SHOX2-201ENST00000389589 SEC24CP53992 1094 aa25.95■■□□□ 1.74
SHOX2-201ENST00000389589 CCL23P55773 120 aa25.95■■□□□ 1.74
SHOX2-201ENST00000389589 PPARDQ03181 441 aa25.95■■□□□ 1.74
SHOX2-201ENST00000389589 FAAP100Q0VG06 881 aa25.95■■□□□ 1.74
SHOX2-201ENST00000389589 DDR2Q16832 855 aa25.95■■□□□ 1.74
SHOX2-201ENST00000389589 IGDCC3Q8IVU1 814 aa25.95■■□□□ 1.74
SHOX2-201ENST00000389589 COLGALT1Q8NBJ5 622 aa25.95■■□□□ 1.74
SHOX2-201ENST00000389589 CCT8L2Q96SF2 557 aa25.95■■□□□ 1.74
SHOX2-201ENST00000389589 CYTH2Q99418 400 aa25.95■■□□□ 1.74
SHOX2-201ENST00000389589 EIF2B3Q9NR50 452 aaKnown RBP25.95■■□□□ 1.74
SHOX2-201ENST00000389589 NUP205Q92621 2012 aa25.94■■□□□ 1.74
SHOX2-201ENST00000389589 A0A1W2PQH9 124 aa25.94■■□□□ 1.74
SHOX2-201ENST00000389589 TMEM120BA0PK00 339 aa25.94■■□□□ 1.74
SHOX2-201ENST00000389589 RASA4BC9J798 803 aa25.94■■□□□ 1.74
SHOX2-201ENST00000389589 MTSS1O43312 755 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms