RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 ATP13A4Q4VNC1 1196 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 CAVIN4Q5BKX8 364 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 FSCBQ5H9T9 825 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 MTX3Q5HYI7 312 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 FAM117BQ6P1L5 589 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 ZBTB49Q6ZSB9 765 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 LRRC49Q8IUZ0 686 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 ZC3H3Q8IXZ2 948 aaKnown RBP15.43■□□□□ 0.06
VLDLR-202ENST00000382099 MYCT1Q8N699 235 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 BPIFB6Q8NFQ5 453 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 MZB1Q8WU39 189 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 ACSF2Q96CM8 615 aaPredicted RBP15.43■□□□□ 0.06
VLDLR-202ENST00000382099 CITED4Q96RK1 184 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 CALN1Q9BXU9 219 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 RPAP3Q9H6T3 665 aaPredicted RBP15.43■□□□□ 0.06
VLDLR-202ENST00000382099 NEK6Q9HC98 313 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 PNPOQ9NVS9 261 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 QPCTLQ9NXS2 382 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 CNTN3Q9P232 1028 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 WARS2Q9UGM6 360 aaKnown RBP15.43■□□□□ 0.06
VLDLR-202ENST00000382099 TRAF6Q9Y4K3 522 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 AFG3L2Q9Y4W6 797 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 STX16-NPEPL1H3BU86 382 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 GAS7O60861 476 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 CLIC3O95833 236 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 MS4A2Q01362 244 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 IKBKEQ14164 716 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 PTK2BQ14289 1009 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 INAVAQ3KP66 663 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 CIAPIN1Q6FI81 312 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 PDIK1LQ8N165 341 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 NDUFAF2Q8N183 169 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 KBTBD7Q8WVZ9 684 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 TMA16Q96EY4 203 aaKnown RBP15.43■□□□□ 0.06
VLDLR-202ENST00000382099 SLC29A1Q99808 456 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 EXOC7Q9UPT5 735 aa15.43■□□□□ 0.06
VLDLR-202ENST00000382099 SYCE1LA8MT33 242 aa15.42■□□□□ 0.06
VLDLR-202ENST00000382099 CDK2AP1O14519 115 aa15.42■□□□□ 0.06
VLDLR-202ENST00000382099 FGRP09769 529 aa15.42■□□□□ 0.06
VLDLR-202ENST00000382099 ALOX5P09917 674 aa15.42■□□□□ 0.06
VLDLR-202ENST00000382099 CXCR2P25025 360 aa15.42■□□□□ 0.06
VLDLR-202ENST00000382099 ADSSP30520 456 aa15.42■□□□□ 0.06
VLDLR-202ENST00000382099 YAP1P46937 504 aaKnown RBP15.42■□□□□ 0.06
VLDLR-202ENST00000382099 KRT6CP48668 564 aa15.42■□□□□ 0.06
VLDLR-202ENST00000382099 EIF6P56537 245 aaKnown RBP15.42■□□□□ 0.06
VLDLR-202ENST00000382099 SLC4A11Q8NBS3 891 aa15.42■□□□□ 0.06
VLDLR-202ENST00000382099 MARK4Q96L34 752 aa15.42■□□□□ 0.06
VLDLR-202ENST00000382099 LOC102724428A0A0B4J2F2 783 aa15.42■□□□□ 0.06
VLDLR-202ENST00000382099 CLDN25C9JDP6 229 aa15.42■□□□□ 0.06
VLDLR-202ENST00000382099 KLF11O14901 512 aa15.42■□□□□ 0.06
VLDLR-202ENST00000382099 MSI1O43347 362 aaKnown RBP15.42■□□□□ 0.06
VLDLR-202ENST00000382099 MAN1A2O60476 641 aa15.42■□□□□ 0.06
VLDLR-202ENST00000382099 CLPXO76031 633 aa15.42■□□□□ 0.06
VLDLR-202ENST00000382099 SIK1P57059 783 aa15.42■□□□□ 0.06
VLDLR-202ENST00000382099 TWF2Q6IBS0 349 aaKnown RBP15.42■□□□□ 0.06
VLDLR-202ENST00000382099 RINT1Q6NUQ1 792 aa15.42■□□□□ 0.06
VLDLR-202ENST00000382099 C16orf46Q6P387 395 aa15.42■□□□□ 0.06
VLDLR-202ENST00000382099 ATG14Q6ZNE5 492 aa15.42■□□□□ 0.06
VLDLR-202ENST00000382099 TICAM1Q8IUC6 712 aa15.42■□□□□ 0.06
VLDLR-202ENST00000382099 EPS8L1Q8TE68 723 aa15.42■□□□□ 0.06
VLDLR-202ENST00000382099 CYGBQ8WWM9 190 aa15.42■□□□□ 0.06
VLDLR-202ENST00000382099 SLC4A5Q9BY07 1137 aa15.42■□□□□ 0.06
VLDLR-202ENST00000382099 PCIF1Q9H4Z3 704 aa15.42■□□□□ 0.06
VLDLR-202ENST00000382099 ADA2Q9NZK5 511 aa15.42■□□□□ 0.06
VLDLR-202ENST00000382099 DNM3Q9UQ16 869 aa15.42■□□□□ 0.06
VLDLR-202ENST00000382099 PLLPQ9Y342 182 aa15.42■□□□□ 0.06
VLDLR-202ENST00000382099 A0A1B0GUL6 1792 aa15.42■□□□□ 0.06
VLDLR-202ENST00000382099 COL22A1Q8NFW1 1626 aaPredicted RBP15.42■□□□□ 0.06
VLDLR-202ENST00000382099 MYH14Q7Z406 1995 aaKnown RBP15.42■□□□□ 0.06
VLDLR-202ENST00000382099 TAF1P21675 1872 aa15.42■□□□□ 0.06
VLDLR-202ENST00000382099 SAC3D1A6NKF1 404 aa15.41■□□□□ 0.06
VLDLR-202ENST00000382099 SNAP91O60641 907 aa15.41■□□□□ 0.06
VLDLR-202ENST00000382099 MED24O75448 989 aa15.41■□□□□ 0.06
VLDLR-202ENST00000382099 PARNO95453 639 aaKnown RBP15.41■□□□□ 0.06
VLDLR-202ENST00000382099 CYP1A2P05177 515 aa15.41■□□□□ 0.06
VLDLR-202ENST00000382099 KRT8P05787 483 aa15.41■□□□□ 0.06
VLDLR-202ENST00000382099 GNAO1P09471 354 aa15.41■□□□□ 0.06
VLDLR-202ENST00000382099 USP17L8P0C7I0 530 aa15.41■□□□□ 0.06
VLDLR-202ENST00000382099 ZNF26P17031 533 aaPredicted RBP15.41■□□□□ 0.06
VLDLR-202ENST00000382099 KCNA4P22459 653 aa15.41■□□□□ 0.06
VLDLR-202ENST00000382099 GABRB3P28472 473 aa15.41■□□□□ 0.06
VLDLR-202ENST00000382099 ACADSBP45954 432 aa15.41■□□□□ 0.06
VLDLR-202ENST00000382099 ADCY7P51828 1080 aa15.41■□□□□ 0.06
VLDLR-202ENST00000382099 TXNL4AP83876 142 aaKnown RBP15.41■□□□□ 0.06
VLDLR-202ENST00000382099 C15orf59Q2T9L4 293 aaPredicted RBP15.41■□□□□ 0.06
VLDLR-202ENST00000382099 RNASEH2BQ5TBB1 312 aaKnown RBP15.41■□□□□ 0.06
VLDLR-202ENST00000382099 AGAP7PQ5VUJ5 663 aa15.41■□□□□ 0.06
VLDLR-202ENST00000382099 KCTD8Q6ZWB6 473 aa15.41■□□□□ 0.06
VLDLR-202ENST00000382099 SNX32Q86XE0 403 aa15.41■□□□□ 0.06
VLDLR-202ENST00000382099 ZNF444Q8N0Y2 327 aaPredicted RBP15.41■□□□□ 0.06
VLDLR-202ENST00000382099 FIG4Q92562 907 aa15.41■□□□□ 0.06
VLDLR-202ENST00000382099 OMA1Q96E52 524 aa15.41■□□□□ 0.06
VLDLR-202ENST00000382099 ZFYVE19Q96K21 471 aa15.41■□□□□ 0.06
VLDLR-202ENST00000382099 NPLQ9BXD5 320 aaPredicted RBP15.41■□□□□ 0.06
VLDLR-202ENST00000382099 THAP1Q9NVV9 213 aa15.41■□□□□ 0.06
VLDLR-202ENST00000382099 CRNNQ9UBG3 495 aaPredicted RBP15.41■□□□□ 0.06
VLDLR-202ENST00000382099 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.41■□□□□ 0.06
VLDLR-202ENST00000382099 CASZ1Q86V15 1759 aa15.41■□□□□ 0.06
VLDLR-202ENST00000382099 ZNF536O15090 1300 aa15.41■□□□□ 0.06
VLDLR-202ENST00000382099 ZBBXA8MT70 800 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms