RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 SAMD15Q9P1V8 674 aa17.73■□□□□ 0.43
PDX1-201ENST00000381033 RABL2BQ9UNT1 228 aa17.73■□□□□ 0.43
PDX1-201ENST00000381033 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.73■□□□□ 0.43
PDX1-201ENST00000381033 TYROBPO43914 113 aa17.73■□□□□ 0.43
PDX1-201ENST00000381033 DAB1O75553 588 aa17.73■□□□□ 0.43
PDX1-201ENST00000381033 PHBP35232 272 aa17.73■□□□□ 0.43
PDX1-201ENST00000381033 MSH2P43246 934 aa17.73■□□□□ 0.43
PDX1-201ENST00000381033 TRMT10BQ6PF06 316 aaKnown RBP17.73■□□□□ 0.43
PDX1-201ENST00000381033 ARCQ7LC44 396 aa17.73■□□□□ 0.43
PDX1-201ENST00000381033 UPF3AQ9H1J1 476 aaKnown RBP17.73■□□□□ 0.43
PDX1-201ENST00000381033 POPDC2Q9HBU9 364 aa17.73■□□□□ 0.43
PDX1-201ENST00000381033 SMYD2Q9NRG4 433 aa17.73■□□□□ 0.43
PDX1-201ENST00000381033 SEPT10Q9P0V9 454 aa17.73■□□□□ 0.43
PDX1-201ENST00000381033 GPR182O15218 404 aa17.72■□□□□ 0.43
PDX1-201ENST00000381033 C1QAP02745 245 aa17.72■□□□□ 0.43
PDX1-201ENST00000381033 ARL4AP40617 200 aa17.72■□□□□ 0.43
PDX1-201ENST00000381033 TRPC1P48995 793 aa17.72■□□□□ 0.43
PDX1-201ENST00000381033 PGFP49763 221 aa17.72■□□□□ 0.43
PDX1-201ENST00000381033 DAOAP59103 153 aa17.72■□□□□ 0.43
PDX1-201ENST00000381033 FAAP100Q0VG06 881 aa17.72■□□□□ 0.43
PDX1-201ENST00000381033 AP1B1Q10567 949 aa17.72■□□□□ 0.43
PDX1-201ENST00000381033 USP4Q13107 963 aa17.72■□□□□ 0.43
PDX1-201ENST00000381033 HEATR6Q6AI08 1181 aaKnown RBP17.72■□□□□ 0.43
PDX1-201ENST00000381033 CCSAPQ6IQ19 270 aaPredicted RBP17.72■□□□□ 0.43
PDX1-201ENST00000381033 YTHDF3Q7Z739 585 aaKnown RBP17.72■□□□□ 0.43
PDX1-201ENST00000381033 DEPDC1BQ8WUY9 529 aa17.72■□□□□ 0.43
PDX1-201ENST00000381033 MYLPFQ96A32 169 aa17.72■□□□□ 0.43
PDX1-201ENST00000381033 SERAC1Q96JX3 654 aa17.72■□□□□ 0.43
PDX1-201ENST00000381033 DHRS4Q9BTZ2 278 aa17.72■□□□□ 0.43
PDX1-201ENST00000381033 CYLDQ9NQC7 956 aa17.72■□□□□ 0.43
PDX1-201ENST00000381033 SLC17A7Q9P2U7 560 aa17.72■□□□□ 0.43
PDX1-201ENST00000381033 SLC24A2Q9UI40 661 aa17.72■□□□□ 0.43
PDX1-201ENST00000381033 ACTL7BQ9Y614 415 aa17.72■□□□□ 0.43
PDX1-201ENST00000381033 HHLA1C9JL84 531 aa17.72■□□□□ 0.43
PDX1-201ENST00000381033 BHLHA9Q7RTU4 235 aa17.72■□□□□ 0.43
PDX1-201ENST00000381033 SPATS2Q86XZ4 545 aaKnown RBP17.72■□□□□ 0.43
PDX1-201ENST00000381033 CCNYQ8ND76 341 aa17.72■□□□□ 0.43
PDX1-201ENST00000381033 OR10T2Q8NGX3 314 aa17.72■□□□□ 0.43
PDX1-201ENST00000381033 SCAMP5Q8TAC9 235 aa17.72■□□□□ 0.43
PDX1-201ENST00000381033 KCTD13Q8WZ19 329 aa17.72■□□□□ 0.43
PDX1-201ENST00000381033 EZH1Q92800 747 aaPredicted RBP17.72■□□□□ 0.43
PDX1-201ENST00000381033 KLC2Q9H0B6 622 aa17.72■□□□□ 0.43
PDX1-201ENST00000381033 WDR6Q9NNW5 1121 aaKnown RBP17.72■□□□□ 0.43
PDX1-201ENST00000381033 MAD1L1Q9Y6D9 718 aa17.72■□□□□ 0.43
PDX1-201ENST00000381033 KCNK1O00180 336 aa17.71■□□□□ 0.43
PDX1-201ENST00000381033 KPNA6O60684 536 aa17.71■□□□□ 0.43
PDX1-201ENST00000381033 ADRA1DP25100 572 aa17.71■□□□□ 0.43
PDX1-201ENST00000381033 SCNN1AP37088 669 aa17.71■□□□□ 0.43
PDX1-201ENST00000381033 FAM133BQ5BKY9 247 aaKnown RBP17.71■□□□□ 0.43
PDX1-201ENST00000381033 BNIPLQ7Z465 357 aa17.71■□□□□ 0.43
PDX1-201ENST00000381033 CTAGE3PQ8IX95 158 aa17.71■□□□□ 0.43
PDX1-201ENST00000381033 OLFM3Q96PB7 478 aa17.71■□□□□ 0.43
PDX1-201ENST00000381033 SLC2A13Q96QE2 648 aa17.71■□□□□ 0.43
PDX1-201ENST00000381033 CHST12Q9NRB3 414 aa17.71■□□□□ 0.43
PDX1-201ENST00000381033 SLC17A6Q9P2U8 582 aa17.71■□□□□ 0.43
PDX1-201ENST00000381033 ZC3H7BQ9UGR2 993 aaKnown RBP17.71■□□□□ 0.43
PDX1-201ENST00000381033 GGA2Q9UJY4 613 aa17.71■□□□□ 0.43
PDX1-201ENST00000381033 GIT1Q9Y2X7 761 aa17.71■□□□□ 0.43
PDX1-201ENST00000381033 TSC2P49815 1807 aa17.71■□□□□ 0.43
PDX1-201ENST00000381033 DGKIO75912 1065 aa17.71■□□□□ 0.43
PDX1-201ENST00000381033 OR4Q2P0C623 313 aa17.71■□□□□ 0.43
PDX1-201ENST00000381033 GJA8P48165 433 aa17.71■□□□□ 0.43
PDX1-201ENST00000381033 LHX1P48742 406 aa17.71■□□□□ 0.43
PDX1-201ENST00000381033 ANKRD20A2Q5SQ80 823 aa17.71■□□□□ 0.43
PDX1-201ENST00000381033 ANKRD20A1Q5TYW2 823 aa17.71■□□□□ 0.43
PDX1-201ENST00000381033 ANKRD20A3Q5VUR7 823 aa17.71■□□□□ 0.43
PDX1-201ENST00000381033 BSPRYQ5W0U4 402 aa17.71■□□□□ 0.43
PDX1-201ENST00000381033 LVRNQ6Q4G3 990 aa17.71■□□□□ 0.43
PDX1-201ENST00000381033 PPM1NQ8N819 430 aa17.71■□□□□ 0.43
PDX1-201ENST00000381033 HTR3CQ8WXA8 447 aa17.71■□□□□ 0.43
PDX1-201ENST00000381033 MAGEB18Q96M61 343 aa17.71■□□□□ 0.43
PDX1-201ENST00000381033 QKIQ96PU8 341 aaKnown RBP eCLIP17.71■□□□□ 0.43
PDX1-201ENST00000381033 PRDM12Q9H4Q4 367 aa17.71■□□□□ 0.43
PDX1-201ENST00000381033 IL1RAPL1Q9NZN1 696 aa17.71■□□□□ 0.43
PDX1-201ENST00000381033 TTLL3Q9Y4R7 772 aa17.71■□□□□ 0.43
PDX1-201ENST00000381033 CCT8L1PA6NM43 557 aa17.7■□□□□ 0.42
PDX1-201ENST00000381033 OAS1P00973 400 aaKnown RBP17.7■□□□□ 0.42
PDX1-201ENST00000381033 MGAT5Q09328 741 aa17.7■□□□□ 0.42
PDX1-201ENST00000381033 PTK7Q13308 1070 aa17.7■□□□□ 0.42
PDX1-201ENST00000381033 CDKL3Q8IVW4 592 aaPredicted RBP17.7■□□□□ 0.42
PDX1-201ENST00000381033 VPS52Q8N1B4 723 aa17.7■□□□□ 0.42
PDX1-201ENST00000381033 PDCD7Q8N8D1 485 aaKnown RBP17.7■□□□□ 0.42
PDX1-201ENST00000381033 KLHDC9Q8NEP7 349 aa17.7■□□□□ 0.42
PDX1-201ENST00000381033 TCP10LQ8TDR4 215 aa17.7■□□□□ 0.42
PDX1-201ENST00000381033 TFB1MQ8WVM0 346 aaKnown RBP17.7■□□□□ 0.42
PDX1-201ENST00000381033 P2RY11Q96G91 374 aa17.7■□□□□ 0.42
PDX1-201ENST00000381033 RMDN2Q96LZ7 410 aa17.7■□□□□ 0.42
PDX1-201ENST00000381033 DDIT4Q9NX09 232 aa17.7■□□□□ 0.42
PDX1-201ENST00000381033 NUDT5Q9UKK9 219 aa17.7■□□□□ 0.42
PDX1-201ENST00000381033 NOD1Q9Y239 953 aa17.7■□□□□ 0.42
PDX1-201ENST00000381033 A0A0U1RQF3 1178 aa17.7■□□□□ 0.42
PDX1-201ENST00000381033 GCATO75600 419 aa17.7■□□□□ 0.42
PDX1-201ENST00000381033 ITGA7Q13683 1181 aa17.7■□□□□ 0.42
PDX1-201ENST00000381033 SPARCL1Q14515 664 aa17.7■□□□□ 0.42
PDX1-201ENST00000381033 MRPL10Q7Z7H8 261 aaKnown RBP17.7■□□□□ 0.42
PDX1-201ENST00000381033 RTN4RL1Q86UN2 441 aaPredicted RBP17.7■□□□□ 0.42
PDX1-201ENST00000381033 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.7■□□□□ 0.42
PDX1-201ENST00000381033 SIGLEC10Q96LC7 697 aa17.7■□□□□ 0.42
PDX1-201ENST00000381033 CYTH2Q99418 400 aa17.7■□□□□ 0.42
PDX1-201ENST00000381033 TRPV6Q9H1D0 765 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms