RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 USP6NLQ92738 828 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 NMUR2Q9GZQ4 415 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 LATS2Q9NRM7 1088 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 TNFSF13BQ9Y275 285 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 MAFO75444 373 aaPredicted RBP13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 PIGNO95427 931 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 ACAT1P24752 427 aaKnown RBP13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 CDKN2BP42772 138 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 INPP1P49441 399 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 NAGLUP54802 743 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 NME5P56597 212 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 SPDYAQ5MJ70 313 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 ZFP1Q6P2D0 407 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 SNED1Q8TER0 1413 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 CPT1BQ92523 772 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 ZNF317Q96PQ6 595 aaPredicted RBP13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 VTI1BQ9UEU0 232 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 SPATA31C2B4DYI2 1134 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 LRCH4O75427 683 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 VAPBO95292 243 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 ZNF286BP0CG31 522 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 CD151P48509 253 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 ZC3H12AQ5D1E8 599 aaKnown RBP13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 EEF1DP3Q658K8 133 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 TMC7Q7Z402 723 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 ADAM32Q8TC27 787 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 ACMSDQ8TDX5 336 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 GTF3C2Q8WUA4 911 aaPredicted RBP13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 SLC44A1Q8WWI5 657 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 APBA2Q99767 749 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 RBM22Q9NW64 420 aaKnown RBP eCLIP13.03□□□□□ -0.323e-6■□□□□ 11.1
DNMT3A-204ENST00000380756 NMRK1Q9NWW6 199 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 HEATR9A2RTY3 570 aa13.02□□□□□ -0.32
DNMT3A-204ENST00000380756 MRPS22P82650 360 aaKnown RBP13.02□□□□□ -0.32
DNMT3A-204ENST00000380756 VSTM1Q6UX27 236 aa13.02□□□□□ -0.32
DNMT3A-204ENST00000380756 GPR141Q7Z602 305 aa13.02□□□□□ -0.32
DNMT3A-204ENST00000380756 CYP4X1Q8N118 509 aa13.02□□□□□ -0.32
DNMT3A-204ENST00000380756 EDEM1Q92611 657 aa13.02□□□□□ -0.32
DNMT3A-204ENST00000380756 PHF21BQ96EK2 531 aa13.02□□□□□ -0.32
DNMT3A-204ENST00000380756 P2RX7Q99572 595 aaKnown RBP13.02□□□□□ -0.32
DNMT3A-204ENST00000380756 C12orf65Q9H3J6 166 aaKnown RBP13.02□□□□□ -0.32
DNMT3A-204ENST00000380756 COL20A1Q9P218 1284 aa13.02□□□□□ -0.32
DNMT3A-204ENST00000380756 UMODL1Q5DID0 1318 aa13.02□□□□□ -0.32
DNMT3A-204ENST00000380756 TNPO2O14787 897 aaKnown RBP13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 CST3P01034 146 aaPredicted RBP13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 ANPEPP15144 967 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 CHRM3P20309 590 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 PSMB4P28070 264 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 NPY2RP49146 381 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 PRKAA2P54646 552 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 PKNOX1P55347 436 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 MAPRE1Q15691 268 aaKnown RBP13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 RNASEH2BQ5TBB1 312 aaKnown RBP13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 LRRN4Q8WUT4 740 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 FAM136AQ96C01 138 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 TRAPPC9Q96Q05 1148 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 RHBDL2Q9NX52 303 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 TRHDEQ9UKU6 1024 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 H0YGN5 161 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 PHGDHO43175 533 aaKnown RBP13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 TBC1D4O60343 1298 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 SOAT2O75908 522 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 CELF2O95319 508 aaKnown RBP13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 TNFAIP8O95379 198 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 AKAP5P24588 427 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 RECQLP46063 649 aaPredicted RBP13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 DGKZQ13574 1117 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 SLC27A1Q6PCB7 646 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 ULK2Q8IYT8 1036 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 CERS2Q96G23 380 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 VPS50Q96JG6 964 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 ZNF670Q9BS34 389 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 DENND2DQ9H6A0 471 aaPredicted RBP13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 SETD4Q9NVD3 440 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 WRAP73Q9P2S5 460 aaPredicted RBP13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 NFS1Q9Y697 457 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 SERPINA6P08185 405 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 ADSSP30520 456 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 HOXD13P35453 343 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 TIGD7Q6NT04 549 aaPredicted RBP13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 TDRPQ86YL5 185 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 MFN1Q8IWA4 741 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 SNRNP27Q8WVK2 155 aaKnown RBP13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 DACT3Q96B18 629 aaPredicted RBP13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 CPXM1Q96SM3 734 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 LZTS1Q9Y250 596 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 AP4S1Q9Y587 144 aa13.02□□□□□ -0.33
DNMT3A-204ENST00000380756 PRR5-ARHGAP8B1AHC4 643 aa13.01□□□□□ -0.33
DNMT3A-204ENST00000380756 H0Y626 953 aa13.01□□□□□ -0.33
DNMT3A-204ENST00000380756 NR5A2O00482 541 aa13.01□□□□□ -0.33
DNMT3A-204ENST00000380756 ZNF862O60290 1169 aa13.01□□□□□ -0.33
DNMT3A-204ENST00000380756 TRIM16O95361 564 aa13.01□□□□□ -0.33
DNMT3A-204ENST00000380756 ASMTLO95671 621 aa13.01□□□□□ -0.33
DNMT3A-204ENST00000380756 ARHGAP8P85298 464 aa13.01□□□□□ -0.33
DNMT3A-204ENST00000380756 POU4F1Q01851 419 aa13.01□□□□□ -0.33
DNMT3A-204ENST00000380756 WASHC5Q12768 1159 aa13.01□□□□□ -0.33
DNMT3A-204ENST00000380756 UBAP2LQ14157 1087 aaKnown RBP13.01□□□□□ -0.33
DNMT3A-204ENST00000380756 NOMO1Q15155 1222 aa13.01□□□□□ -0.33
DNMT3A-204ENST00000380756 OR52K1Q8NGK4 314 aa13.01□□□□□ -0.33
DNMT3A-204ENST00000380756 RIN3Q8TB24 985 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms