RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 KDSRQ06136 332 aa9.62□□□□□ -0.87
HMGN1-202ENST00000380747 TRIP4Q15650 581 aaPredicted RBP9.62□□□□□ -0.87
HMGN1-202ENST00000380747 ASIC2Q16515 512 aa9.62□□□□□ -0.87
HMGN1-202ENST00000380747 TMEM196Q5HYL7 178 aa9.62□□□□□ -0.87
HMGN1-202ENST00000380747 EFHC1Q5JVL4 640 aa9.62□□□□□ -0.87
HMGN1-202ENST00000380747 DGKKQ5KSL6 1271 aa9.62□□□□□ -0.87
HMGN1-202ENST00000380747 SYPL2Q5VXT5 272 aa9.62□□□□□ -0.87
HMGN1-202ENST00000380747 MSANTD2Q6P1R3 559 aa9.62□□□□□ -0.87
HMGN1-202ENST00000380747 Q6ZNB5 142 aa9.62□□□□□ -0.87
HMGN1-202ENST00000380747 Q6ZS52 159 aa9.62□□□□□ -0.87
HMGN1-202ENST00000380747 TOGARAM2Q6ZUX3 1019 aa9.62□□□□□ -0.87
HMGN1-202ENST00000380747 C12orf40Q86WS4 652 aa9.62□□□□□ -0.87
HMGN1-202ENST00000380747 DEFB106AQ8N104 65 aa9.62□□□□□ -0.87
HMGN1-202ENST00000380747 NAT16Q8N8M0 369 aa9.62□□□□□ -0.87
HMGN1-202ENST00000380747 MSANTD4Q8NCY6 345 aa9.62□□□□□ -0.87
HMGN1-202ENST00000380747 ADAM32Q8TC27 787 aa9.62□□□□□ -0.87
HMGN1-202ENST00000380747 DQX1Q8TE96 717 aaKnown RBP9.62□□□□□ -0.87
HMGN1-202ENST00000380747 BHMTQ93088 406 aa9.62□□□□□ -0.87
HMGN1-202ENST00000380747 C18orf8Q96DM3 657 aa9.62□□□□□ -0.87
HMGN1-202ENST00000380747 SERPINB11Q96P15 392 aa9.62□□□□□ -0.87
HMGN1-202ENST00000380747 SLC6A16Q9GZN6 736 aa9.62□□□□□ -0.87
HMGN1-202ENST00000380747 CHRDQ9H2X0 955 aa9.62□□□□□ -0.87
HMGN1-202ENST00000380747 FAM204AQ9H8W3 233 aa9.62□□□□□ -0.87
HMGN1-202ENST00000380747 POPDC2Q9HBU9 364 aa9.62□□□□□ -0.87
HMGN1-202ENST00000380747 PRMT8Q9NR22 394 aaPredicted RBP9.62□□□□□ -0.87
HMGN1-202ENST00000380747 EVA1BQ9NVM1 165 aa9.62□□□□□ -0.87
HMGN1-202ENST00000380747 AGO1Q9UL18 857 aaKnown RBP9.62□□□□□ -0.87
HMGN1-202ENST00000380747 SYNJ2BP-COX16A0A087WUM0 186 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 LRRC53A6NM62 1247 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.61□□□□□ -0.87
HMGN1-202ENST00000380747 TSPAN3O60637 253 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 HSF2BPO75031 334 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 LRP3O75074 770 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 CYBBP04839 570 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 APODP05090 189 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 GLI1P08151 1106 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 RNASE9P60153 205 aaKnown RBP9.61□□□□□ -0.87
HMGN1-202ENST00000380747 CDK17Q00537 523 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 CSTF1Q05048 431 aaKnown RBP9.61□□□□□ -0.87
HMGN1-202ENST00000380747 MTAPQ13126 283 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 GAB4Q2WGN9 574 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 C2CD6Q53TS8 623 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 DCAF6Q58WW2 860 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 OLFML1Q6UWY5 402 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 TRIM72Q6ZMU5 477 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 BEND5Q7L4P6 421 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 TAC4Q86UU9 113 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 ZDHHC17Q8IUH5 632 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 SPNS2Q8IVW8 549 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 BAP1Q92560 729 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 RNF166Q96A37 237 aaPredicted RBP9.61□□□□□ -0.87
HMGN1-202ENST00000380747 CCDC97Q96F63 343 aaPredicted RBP9.61□□□□□ -0.87
HMGN1-202ENST00000380747 PNKPQ96T60 521 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 PCDHB18PQ96TA0 734 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 AGPAT1Q99943 283 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 IER2Q9BTL4 223 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 NUP58Q9BVL2 599 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 BBS2Q9BXC9 721 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 XPO4Q9C0E2 1151 aaKnown RBP9.61□□□□□ -0.87
HMGN1-202ENST00000380747 ARHGEF4Q9NR80 690 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 DNAJC17Q9NVM6 304 aaKnown RBP9.61□□□□□ -0.87
HMGN1-202ENST00000380747 ASNSD1Q9NWL6 643 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 PLK2Q9NYY3 685 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 COX16Q9P0S2 106 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 WDR35Q9P2L0 1181 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 FKBPLQ9UIM3 349 aa9.61□□□□□ -0.87
HMGN1-202ENST00000380747 MIA3Q5JRA6 1907 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 TULP3O75386 442 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 DAB1O75553 588 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 TRUB2O95900 331 aaKnown RBP9.6□□□□□ -0.87
HMGN1-202ENST00000380747 MOCS2O96007 188 aaPredicted RBP9.6□□□□□ -0.87
HMGN1-202ENST00000380747 CYP1A1P04798 512 aaPredicted RBP9.6□□□□□ -0.87
HMGN1-202ENST00000380747 TPM3P06753 285 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 TYRP14679 529 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 TNFAIP3P21580 790 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 CHKAP35790 457 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 NSFP46459 744 aaKnown RBP9.6□□□□□ -0.87
HMGN1-202ENST00000380747 GABRB2P47870 512 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 SLC11A2P49281 568 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 CCR3P51677 355 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 SEC13P55735 322 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 ZNF445P59923 1031 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 PITX1P78337 314 aaPredicted RBP9.6□□□□□ -0.87
HMGN1-202ENST00000380747 RING1Q06587 406 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 CCINQ13939 588 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 GAS6Q14393 721 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 ST3GAL2Q16842 350 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 FBXO43Q4G163 708 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 FAM102AQ5T9C2 384 aaPredicted RBP9.6□□□□□ -0.87
HMGN1-202ENST00000380747 SFMBT2Q5VUG0 894 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 NUGGCQ68CJ6 796 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 GRAMD4Q6IC98 578 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 MMS22LQ6ZRQ5 1243 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 SLC26A9Q7LBE3 791 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 PHLDB2Q86SQ0 1253 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 XYLT1Q86Y38 959 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 UNC45BQ8IWX7 931 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 HOMEZQ8IX15 550 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 SYNPOQ8N3V7 929 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 SPEM1Q8N4L4 309 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms