RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 TRMT61BQ9BVS5 477 aaKnown RBP19.47■□□□□ 0.71
SMN2-202ENST00000380742 IRX2Q9BZI1 471 aaPredicted RBP19.47■□□□□ 0.71
SMN2-202ENST00000380742 GPATCH2LQ9NWQ4 482 aa19.47■□□□□ 0.71
SMN2-202ENST00000380742 THG1LQ9NWX6 298 aaKnown RBP19.47■□□□□ 0.71
SMN2-202ENST00000380742 HS3ST4Q9Y661 456 aa19.47■□□□□ 0.71
SMN2-202ENST00000380742 COL4A3Q01955 1670 aa19.47■□□□□ 0.71
SMN2-202ENST00000380742 SLC9A3R1O14745 358 aaPredicted RBP19.46■□□□□ 0.71
SMN2-202ENST00000380742 CHADO15335 359 aa19.46■□□□□ 0.71
SMN2-202ENST00000380742 GDI1P31150 447 aa19.46■□□□□ 0.71
SMN2-202ENST00000380742 GGCXP38435 758 aa19.46■□□□□ 0.71
SMN2-202ENST00000380742 IFNAR2P48551 515 aa19.46■□□□□ 0.71
SMN2-202ENST00000380742 AIF1P55008 147 aa19.46■□□□□ 0.71
SMN2-202ENST00000380742 EML3Q32P44 896 aa19.46■□□□□ 0.71
SMN2-202ENST00000380742 ARL13BQ3SXY8 428 aa19.46■□□□□ 0.71
SMN2-202ENST00000380742 MS4A13Q5J8X5 152 aa19.46■□□□□ 0.71
SMN2-202ENST00000380742 ERMARDQ5T6L9 678 aa19.46■□□□□ 0.71
SMN2-202ENST00000380742 RAP1GAP2Q684P5 730 aa19.46■□□□□ 0.71
SMN2-202ENST00000380742 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.46■□□□□ 0.71
SMN2-202ENST00000380742 ADGRG2Q8IZP9 1017 aa19.46■□□□□ 0.71
SMN2-202ENST00000380742 KIAA1524Q8TCG1 905 aa19.46■□□□□ 0.71
SMN2-202ENST00000380742 OTUB2Q96DC9 234 aa19.46■□□□□ 0.71
SMN2-202ENST00000380742 TRIM44Q96DX7 344 aaPredicted RBP19.46■□□□□ 0.71
SMN2-202ENST00000380742 MYEOVQ96EZ4 313 aa19.46■□□□□ 0.71
SMN2-202ENST00000380742 PRMT1Q99873 361 aaKnown RBP19.46■□□□□ 0.71
SMN2-202ENST00000380742 SNRNP25Q9BV90 132 aaKnown RBP19.46■□□□□ 0.71
SMN2-202ENST00000380742 SIK2Q9H0K1 926 aa19.46■□□□□ 0.71
SMN2-202ENST00000380742 ZWILCHQ9H900 591 aa19.46■□□□□ 0.71
SMN2-202ENST00000380742 GFRA2O00451 464 aa19.45■□□□□ 0.7
SMN2-202ENST00000380742 TRDMT1O14717 391 aaKnown RBP19.45■□□□□ 0.7
SMN2-202ENST00000380742 SPOPO43791 374 aa19.45■□□□□ 0.7
SMN2-202ENST00000380742 RARAP10276 462 aa19.45■□□□□ 0.7
SMN2-202ENST00000380742 ARSAP15289 507 aa19.45■□□□□ 0.7
SMN2-202ENST00000380742 VCPP55072 806 aaKnown RBP19.45■□□□□ 0.7
SMN2-202ENST00000380742 MLLT6P55198 1093 aaPredicted RBP19.45■□□□□ 0.7
SMN2-202ENST00000380742 CA9Q16790 459 aa19.45■□□□□ 0.7
SMN2-202ENST00000380742 HADHQ16836 314 aaKnown RBP19.45■□□□□ 0.7
SMN2-202ENST00000380742 SMTNL2Q2TAL5 461 aa19.45■□□□□ 0.7
SMN2-202ENST00000380742 ATP13A4Q4VNC1 1196 aa19.45■□□□□ 0.7
SMN2-202ENST00000380742 KCNT1Q5JUK3 1230 aa19.45■□□□□ 0.7
SMN2-202ENST00000380742 ARTNQ5T4W7 220 aa19.45■□□□□ 0.7
SMN2-202ENST00000380742 RFWD3Q6PCD5 774 aa19.45■□□□□ 0.7
SMN2-202ENST00000380742 C14orf80Q86SX3 495 aa19.45■□□□□ 0.7
SMN2-202ENST00000380742 PYROXD2Q8N2H3 581 aa19.45■□□□□ 0.7
SMN2-202ENST00000380742 C17orf53Q8N3J3 647 aaPredicted RBP19.45■□□□□ 0.7
SMN2-202ENST00000380742 CPXM2Q8N436 756 aa19.45■□□□□ 0.7
SMN2-202ENST00000380742 P2RY11Q96G91 374 aa19.45■□□□□ 0.7
SMN2-202ENST00000380742 C1orf74Q96LT6 269 aa19.45■□□□□ 0.7
SMN2-202ENST00000380742 OSBPL2Q9H1P3 480 aa19.45■□□□□ 0.7
SMN2-202ENST00000380742 EBF3Q9H4W6 596 aa19.45■□□□□ 0.7
SMN2-202ENST00000380742 HPS4Q9NQG7 708 aa19.45■□□□□ 0.7
SMN2-202ENST00000380742 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.45■□□□□ 0.7
SMN2-202ENST00000380742 AP4E1Q9UPM8 1137 aa19.45■□□□□ 0.7
SMN2-202ENST00000380742 ARNTLO00327 626 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 TACR2P21452 398 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 CHKAP35790 457 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 GJC1P36383 396 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 TNK2Q07912 1038 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 MTA1Q13330 715 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 AUHQ13825 339 aaKnown RBP19.44■□□□□ 0.7
SMN2-202ENST00000380742 PDGFRLQ15198 375 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 BOLA3Q53S33 107 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 EFHC2Q5JST6 749 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 NT5DC3Q86UY8 548 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 CHSY1Q86X52 802 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 CD101Q93033 1021 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 KCND1Q9NSA2 647 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 OTOL1A6NHN0 477 aaPredicted RBP19.44■□□□□ 0.7
SMN2-202ENST00000380742 FAM72CH0Y354 149 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 NARSO43776 548 aaKnown RBP19.44■□□□□ 0.7
SMN2-202ENST00000380742 TSPAN3O60637 253 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 TNNT1P13805 278 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 SGSHP51688 502 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 TDGQ13569 410 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 FAM72AQ5TYM5 149 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 FAM72DQ6L9T8 149 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 FBXL22Q6P050 247 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 RHBDF2Q6PJF5 856 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 FAM72BQ86X60 149 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 TMEM25Q86YD3 366 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 ZNF683Q8IZ20 524 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 SYCE1Q8N0S2 351 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 TEKT4Q8WW24 435 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 HSPH1Q92598 858 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 PRICKLE1Q96MT3 831 aaPredicted RBP19.44■□□□□ 0.7
SMN2-202ENST00000380742 DDX50Q9BQ39 737 aaKnown RBP19.44■□□□□ 0.7
SMN2-202ENST00000380742 DHX35Q9H5Z1 703 aaKnown RBP19.44■□□□□ 0.7
SMN2-202ENST00000380742 BRD9Q9H8M2 597 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 CD320Q9NPF0 282 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 OR12D3Q9UGF7 316 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 VANGL2Q9ULK5 521 aa19.44■□□□□ 0.7
SMN2-202ENST00000380742 KIAA1549LQ6ZVL6 1849 aa19.43■□□□□ 0.7
SMN2-202ENST00000380742 FTCDO95954 541 aa19.43■□□□□ 0.7
SMN2-202ENST00000380742 CYP17A1P05093 508 aa19.43■□□□□ 0.7
SMN2-202ENST00000380742 L1CAMP32004 1257 aa19.43■□□□□ 0.7
SMN2-202ENST00000380742 NRG1Q02297 640 aaPredicted RBP19.43■□□□□ 0.7
SMN2-202ENST00000380742 SEMA3BQ13214 749 aa19.43■□□□□ 0.7
SMN2-202ENST00000380742 RUNX3Q13761 415 aa19.43■□□□□ 0.7
SMN2-202ENST00000380742 DHCR24Q15392 516 aa19.43■□□□□ 0.7
SMN2-202ENST00000380742 TJAP1Q5JTD0 557 aa19.43■□□□□ 0.7
SMN2-202ENST00000380742 LY6G5CQ5SRR4 150 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms