RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 SIGLEC10Q96LC7 697 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 UROC1Q96N76 676 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 CSNK1G1Q9HCP0 422 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 KLC4Q9NSK0 619 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 ABCF3Q9NUQ8 709 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 CACNG4Q9UBN1 327 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 MAD1L1Q9Y6D9 718 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 YJEFN3A6XGL0 299 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 E7ENQ6 273 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 NRP1O14786 923 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 EDF1O60869 148 aaKnown RBP13.01□□□□□ -0.33
VPS16-202ENST00000380445 PIAS1O75925 651 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 FAM155BO75949 473 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 KRT38O76015 456 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 CYP11A1P05108 521 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 ALADP13716 330 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 ALDH3A1P30838 453 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 CD52P31358 61 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 AFF1P51825 1210 aaKnown RBP13.01□□□□□ -0.33
VPS16-202ENST00000380445 PITX1P78337 314 aaPredicted RBP13.01□□□□□ -0.33
VPS16-202ENST00000380445 FAAP100Q0VG06 881 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 GRIK3Q13003 919 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 AGGF1Q8N302 714 aaeCLIP13.01□□□□□ -0.33
VPS16-202ENST00000380445 CCDC63Q8NA47 563 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 PCSK9Q8NBP7 692 aaKnown RBP13.01□□□□□ -0.33
VPS16-202ENST00000380445 CCNYQ8ND76 341 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 LRRN4Q8WUT4 740 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 ZNF75CPQ92670 426 aaPredicted RBP13.01□□□□□ -0.33
VPS16-202ENST00000380445 APOPT1Q96IL0 206 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 KCNK16Q96T55 309 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 LGMNQ99538 433 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 FBXW11Q9UKB1 542 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 GABRQQ9UN88 632 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 B3GAT3O94766 335 aa13□□□□□ -0.33
VPS16-202ENST00000380445 CCDC15Q0P6D6 951 aa13□□□□□ -0.33
VPS16-202ENST00000380445 DPYSQ14117 519 aa13□□□□□ -0.33
VPS16-202ENST00000380445 MAPRE1Q15691 268 aaKnown RBP13□□□□□ -0.33
VPS16-202ENST00000380445 KCNA10Q16322 511 aa13□□□□□ -0.33
VPS16-202ENST00000380445 PARP6Q2NL67 630 aa13□□□□□ -0.33
VPS16-202ENST00000380445 FAM133BQ5BKY9 247 aaKnown RBP13□□□□□ -0.33
VPS16-202ENST00000380445 UNC5AQ6ZN44 842 aa13□□□□□ -0.33
VPS16-202ENST00000380445 DENND5BQ6ZUT9 1274 aa13□□□□□ -0.33
VPS16-202ENST00000380445 HFE2Q6ZVN8 426 aa13□□□□□ -0.33
VPS16-202ENST00000380445 ZMIZ2Q8NF64 920 aa13□□□□□ -0.33
VPS16-202ENST00000380445 P2RY11Q96G91 374 aa13□□□□□ -0.33
VPS16-202ENST00000380445 IQCGQ9H095 443 aaKnown RBP13□□□□□ -0.33
VPS16-202ENST00000380445 BRD8Q9H0E9 1235 aa13□□□□□ -0.33
VPS16-202ENST00000380445 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13□□□□□ -0.33
VPS16-202ENST00000380445 PCDHA11Q9Y5I1 949 aa13□□□□□ -0.33
VPS16-202ENST00000380445 CFAP73A6NFT4 308 aa13□□□□□ -0.33
VPS16-202ENST00000380445 RNF103O00237 685 aa13□□□□□ -0.33
VPS16-202ENST00000380445 FYNP06241 537 aa13□□□□□ -0.33
VPS16-202ENST00000380445 USP17L7P0C7H9 530 aa13□□□□□ -0.33
VPS16-202ENST00000380445 VAV1P15498 845 aa13□□□□□ -0.33
VPS16-202ENST00000380445 IGFBP6P24592 240 aaPredicted RBP13□□□□□ -0.33
VPS16-202ENST00000380445 SERPINB9P50453 376 aa13□□□□□ -0.33
VPS16-202ENST00000380445 CLNS1AP54105 237 aaKnown RBP13□□□□□ -0.33
VPS16-202ENST00000380445 TPI1P60174 286 aa13□□□□□ -0.33
VPS16-202ENST00000380445 CACNB2Q08289 660 aaPredicted RBP13□□□□□ -0.33
VPS16-202ENST00000380445 FYB2Q5VWT5 728 aa13□□□□□ -0.33
VPS16-202ENST00000380445 CGB2Q6NT52 195 aa13□□□□□ -0.33
VPS16-202ENST00000380445 ZNF534Q76KX8 674 aa13□□□□□ -0.33
VPS16-202ENST00000380445 PRPF39Q86UA1 669 aaKnown RBP13□□□□□ -0.33
VPS16-202ENST00000380445 SCML4Q8N228 414 aa13□□□□□ -0.33
VPS16-202ENST00000380445 RNF169Q8NCN4 708 aa13□□□□□ -0.33
VPS16-202ENST00000380445 NAT9Q9BTE0 207 aa13□□□□□ -0.33
VPS16-202ENST00000380445 GRID1Q9ULK0 1009 aa13□□□□□ -0.33
VPS16-202ENST00000380445 NOD1Q9Y239 953 aa13□□□□□ -0.33
VPS16-202ENST00000380445 SQORQ9Y6N5 450 aa13□□□□□ -0.33
VPS16-202ENST00000380445 USH1CQ9Y6N9 552 aa13□□□□□ -0.33
VPS16-202ENST00000380445 SDR42E2A6NKP2 422 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 GOLGA8RI6L899 631 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 DCLK1O15075 740 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 MTSS1O43312 755 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 UBOX5O94941 541 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 ADRA1DP25100 572 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 CNTFP26441 200 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 CST5P28325 142 aaPredicted RBP12.99□□□□□ -0.33
VPS16-202ENST00000380445 TUSC3Q13454 348 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 DSC3Q14574 896 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 SETDB1Q15047 1291 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 GALNTL6Q49A17 601 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 INTS6LQ5JSJ4 861 aaKnown RBP12.99□□□□□ -0.33
VPS16-202ENST00000380445 FAM171BQ6P995 826 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 LRRC8BQ6P9F7 803 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 THEM5Q8N1Q8 247 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 ZNF784Q8NCA9 323 aaPredicted RBP12.99□□□□□ -0.33
VPS16-202ENST00000380445 KLHDC9Q8NEP7 349 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 PRDM12Q9H4Q4 367 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 WDR6Q9NNW5 1121 aaKnown RBP12.99□□□□□ -0.33
VPS16-202ENST00000380445 DDIT4Q9NX09 232 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 MFHAS1Q9Y4C4 1052 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 POMCP01189 267 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 C1QAP02745 245 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 CCNHP51946 323 aaPredicted RBP12.99□□□□□ -0.33
VPS16-202ENST00000380445 IFRD2Q12894 506 aaPredicted RBP12.99□□□□□ -0.33
VPS16-202ENST00000380445 CCDC33Q8N5R6 958 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 MYLPFQ96A32 169 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 STAMBPL1Q96FJ0 436 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 EPAS1Q99814 870 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms