RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 ITM2AO43736 263 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 TFPTP0C1Z6 253 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 COL6A2P12110 1019 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 MTTPP55157 894 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 CLDN10P78369 228 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 GSTM4Q03013 218 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 TNS4Q8IZW8 715 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 ARHGAP24Q8N264 748 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 TTC13Q8NBP0 860 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 RDM1Q8NG50 284 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 ERLEC1Q96DZ1 483 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 ASNSD1Q9NWL6 643 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 UBAP1Q9NZ09 502 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 STRIP2Q9ULQ0 834 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 AK5Q9Y6K8 562 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 ADGRA2Q96PE1 1338 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 CITO14578 2027 aa12.84□□□□□ -0.35
PRPF40B-202ENST00000380281 WDR27A2RRH5 827 aa12.83□□□□□ -0.35
PRPF40B-202ENST00000380281 SNRPAP09012 282 aaKnown RBP12.83□□□□□ -0.35
PRPF40B-202ENST00000380281 STAG3L1P0CL83 205 aa12.83□□□□□ -0.35
PRPF40B-202ENST00000380281 SMIM18P0DKX4 95 aa12.83□□□□□ -0.35
PRPF40B-202ENST00000380281 CHN2P52757 468 aa12.83□□□□□ -0.35
PRPF40B-202ENST00000380281 PHEXP78562 749 aa12.83□□□□□ -0.35
PRPF40B-202ENST00000380281 TBL3Q12788 808 aaKnown RBP12.83□□□□□ -0.35
PRPF40B-202ENST00000380281 TCHHL1Q5QJ38 904 aaPredicted RBP12.83□□□□□ -0.35
PRPF40B-202ENST00000380281 MOB2Q70IA6 237 aa12.83□□□□□ -0.35
PRPF40B-202ENST00000380281 SLC26A11Q86WA9 606 aa12.83□□□□□ -0.35
PRPF40B-202ENST00000380281 RELL1Q8IUW5 271 aa12.83□□□□□ -0.35
PRPF40B-202ENST00000380281 AGBL3Q8NEM8 1001 aa12.83□□□□□ -0.35
PRPF40B-202ENST00000380281 SLC44A1Q8WWI5 657 aa12.83□□□□□ -0.35
PRPF40B-202ENST00000380281 SEPT1Q8WYJ6 367 aa12.83□□□□□ -0.35
PRPF40B-202ENST00000380281 HPDLQ96IR7 371 aa12.83□□□□□ -0.35
PRPF40B-202ENST00000380281 LGMNQ99538 433 aa12.83□□□□□ -0.35
PRPF40B-202ENST00000380281 CDT1Q9H211 546 aa12.83□□□□□ -0.35
PRPF40B-202ENST00000380281 APPL1Q9UKG1 709 aa12.83□□□□□ -0.35
PRPF40B-202ENST00000380281 ADAMTS6Q9UKP5 1117 aa12.83□□□□□ -0.35
PRPF40B-202ENST00000380281 TMEM247A6NEH6 219 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 PPEF2O14830 753 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 DGKIO75912 1065 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 GPD1P21695 349 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 SERPINB8P50452 374 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 ACTR3P61158 418 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 PRKD1Q15139 912 aaPredicted RBP12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 MYLK3Q32MK0 819 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 TMEM53Q6P2H8 277 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 FAM131BQ86XD5 332 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 CRLF3Q8IUI8 442 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 PLD5Q8N7P1 536 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 MZB1Q8WU39 189 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 C17orf50Q8WW18 174 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 SKA1Q96BD8 255 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 EFR3BQ9Y2G0 817 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 DNAJC16Q9Y2G8 782 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 GOLGA8QA0A0J9YX86 632 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 GOLGA8OA6NCC3 632 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 GOLGA8NF8WBI6 632 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 NEMP1O14524 444 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 ZFXP17010 805 aaPredicted RBP12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 SERPINB6P35237 376 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 NAA20P61599 178 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 PPIDQ08752 370 aaKnown RBP12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 TRIP10Q15642 601 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 GRAMD1BQ3KR37 738 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 LRRC38Q5VT99 294 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 PMF1Q6P1K2 205 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 IYDQ6PHW0 289 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 UNC5AQ6ZN44 842 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 PIP4K2CQ8TBX8 421 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 GDPD5Q8WTR4 605 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 TMEM176AQ96HP8 235 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 RNPEPQ9H4A4 650 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 PRDM16Q9HAZ2 1276 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 GGA3Q9NZ52 723 aa12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 CPSF3Q9UKF6 684 aaKnown RBP12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 FAF1Q9UNN5 650 aaPredicted RBP12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 MTO1Q9Y2Z2 717 aaKnown RBP12.83□□□□□ -0.36
PRPF40B-202ENST00000380281 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.82□□□□□ -0.36
PRPF40B-202ENST00000380281 TM9SF1O15321 606 aa12.82□□□□□ -0.36
PRPF40B-202ENST00000380281 LSM8O95777 96 aaKnown RBP12.82□□□□□ -0.36
PRPF40B-202ENST00000380281 SLC5A2P31639 672 aa12.82□□□□□ -0.36
PRPF40B-202ENST00000380281 RAP1GDS1P52306 607 aa12.82□□□□□ -0.36
PRPF40B-202ENST00000380281 MRPS5P82675 430 aaKnown RBP12.82□□□□□ -0.36
PRPF40B-202ENST00000380281 STX3Q13277 289 aa12.82□□□□□ -0.36
PRPF40B-202ENST00000380281 GOLGA7BQ2TAP0 167 aa12.82□□□□□ -0.36
PRPF40B-202ENST00000380281 SPDYAQ5MJ70 313 aa12.82□□□□□ -0.36
PRPF40B-202ENST00000380281 CMC1Q7Z7K0 106 aa12.82□□□□□ -0.36
PRPF40B-202ENST00000380281 TP53INP2Q8IXH6 220 aa12.82□□□□□ -0.36
PRPF40B-202ENST00000380281 OR6B3Q8NGW1 331 aa12.82□□□□□ -0.36
PRPF40B-202ENST00000380281 PCDH19Q8TAB3 1148 aa12.82□□□□□ -0.36
PRPF40B-202ENST00000380281 ADAM32Q8TC27 787 aa12.82□□□□□ -0.36
PRPF40B-202ENST00000380281 RSAD1Q9HA92 442 aa12.82□□□□□ -0.36
PRPF40B-202ENST00000380281 PNPOQ9NVS9 261 aa12.82□□□□□ -0.36
PRPF40B-202ENST00000380281 STYXL1Q9Y6J8 313 aa12.82□□□□□ -0.36
PRPF40B-202ENST00000380281 EVPLQ92817 2033 aa12.82□□□□□ -0.36
PRPF40B-202ENST00000380281 RBBP6Q7Z6E9 1792 aaKnown RBP12.82□□□□□ -0.36
PRPF40B-202ENST00000380281 SOWAHBA6NEL2 793 aa12.82□□□□□ -0.36
PRPF40B-202ENST00000380281 LSM1O15116 133 aaKnown RBP12.82□□□□□ -0.36
PRPF40B-202ENST00000380281 MED7O43513 233 aa12.82□□□□□ -0.36
PRPF40B-202ENST00000380281 GK3PQ14409 553 aa12.82□□□□□ -0.36
PRPF40B-202ENST00000380281 GRM2Q14416 872 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms