RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 GFPT2O94808 682 aa14.36□□□□□ -0.11
PRPF18-202ENST00000378572 RALAP11233 206 aa14.36□□□□□ -0.11
PRPF18-202ENST00000378572 GABRG2P18507 467 aa14.36□□□□□ -0.11
PRPF18-202ENST00000378572 DPP6P42658 865 aa14.36□□□□□ -0.11
PRPF18-202ENST00000378572 DGKGP49619 791 aa14.36□□□□□ -0.11
PRPF18-202ENST00000378572 YWHAEP62258 255 aaKnown RBP14.36□□□□□ -0.11
PRPF18-202ENST00000378572 KLHL30Q0D2K2 578 aa14.36□□□□□ -0.11
PRPF18-202ENST00000378572 INCA1Q0VD86 236 aa14.36□□□□□ -0.11
PRPF18-202ENST00000378572 MAP7D1Q3KQU3 841 aa14.36□□□□□ -0.11
PRPF18-202ENST00000378572 KIAA1324Q6UXG2 1013 aaKnown RBP14.36□□□□□ -0.11
PRPF18-202ENST00000378572 RAD9BQ6WBX8 426 aa14.36□□□□□ -0.11
PRPF18-202ENST00000378572 SLC36A4Q6YBV0 504 aa14.36□□□□□ -0.11
PRPF18-202ENST00000378572 HTR3DQ70Z44 454 aa14.36□□□□□ -0.11
PRPF18-202ENST00000378572 DEFB124Q8NES8 71 aa14.36□□□□□ -0.11
PRPF18-202ENST00000378572 KCNV2Q8TDN2 545 aa14.36□□□□□ -0.11
PRPF18-202ENST00000378572 NHEJ1Q9H9Q4 299 aaPredicted RBP14.36□□□□□ -0.11
PRPF18-202ENST00000378572 NMUR1Q9HB89 426 aa14.36□□□□□ -0.11
PRPF18-202ENST00000378572 CYLDQ9NQC7 956 aa14.36□□□□□ -0.11
PRPF18-202ENST00000378572 OSER1Q9NX31 292 aa14.36□□□□□ -0.11
PRPF18-202ENST00000378572 PLK2Q9NYY3 685 aa14.36□□□□□ -0.11
PRPF18-202ENST00000378572 CYP8B1Q9UNU6 501 aa14.36□□□□□ -0.11
PRPF18-202ENST00000378572 RAD54BQ9Y620 910 aa14.36□□□□□ -0.11
PRPF18-202ENST00000378572 EPN1Q9Y6I3 576 aaPredicted RBP14.36□□□□□ -0.11
PRPF18-202ENST00000378572 LAMA1P25391 3075 aa14.36□□□□□ -0.11
PRPF18-202ENST00000378572 A0A0A0MRY4 1105 aa14.35□□□□□ -0.11
PRPF18-202ENST00000378572 CACNG3O60359 315 aa14.35□□□□□ -0.11
PRPF18-202ENST00000378572 ENGP17813 658 aa14.35□□□□□ -0.11
PRPF18-202ENST00000378572 ITPKAP23677 461 aa14.35□□□□□ -0.11
PRPF18-202ENST00000378572 MSNP26038 577 aaKnown RBP14.35□□□□□ -0.11
PRPF18-202ENST00000378572 ASTE1Q2TB18 679 aaPredicted RBP14.35□□□□□ -0.11
PRPF18-202ENST00000378572 TDRD12Q587J7 1177 aaKnown RBP14.35□□□□□ -0.11
PRPF18-202ENST00000378572 RSRC2Q7L4I2 434 aaKnown RBP14.35□□□□□ -0.11
PRPF18-202ENST00000378572 TTC39CQ8N584 583 aa14.35□□□□□ -0.11
PRPF18-202ENST00000378572 CCDC42Q96M95 316 aa14.35□□□□□ -0.11
PRPF18-202ENST00000378572 HEXIM2Q96MH2 286 aaKnown RBP14.35□□□□□ -0.11
PRPF18-202ENST00000378572 EVLQ9UI08 416 aaPredicted RBP14.35□□□□□ -0.11
PRPF18-202ENST00000378572 EIF3CLB5ME19 914 aaKnown RBP14.35□□□□□ -0.11
PRPF18-202ENST00000378572 NDUFS2O75306 463 aa14.35□□□□□ -0.11
PRPF18-202ENST00000378572 NDUFA10O95299 355 aa14.35□□□□□ -0.11
PRPF18-202ENST00000378572 LCA5LO95447 670 aa14.35□□□□□ -0.11
PRPF18-202ENST00000378572 EIF4A3P38919 411 aaKnown RBP14.35□□□□□ -0.11
PRPF18-202ENST00000378572 PLA2G4AP47712 749 aa14.35□□□□□ -0.11
PRPF18-202ENST00000378572 BPIFB4P59827 614 aa14.35□□□□□ -0.11
PRPF18-202ENST00000378572 SHC2P98077 582 aa14.35□□□□□ -0.11
PRPF18-202ENST00000378572 EFEMP1Q12805 493 aa14.35□□□□□ -0.11
PRPF18-202ENST00000378572 TOGARAM2Q6ZUX3 1019 aa14.35□□□□□ -0.11
PRPF18-202ENST00000378572 HDDC3Q8N4P3 179 aa14.35□□□□□ -0.11
PRPF18-202ENST00000378572 IPO4Q8TEX9 1081 aaKnown RBP14.35□□□□□ -0.11
PRPF18-202ENST00000378572 ACOX2Q99424 681 aa14.35□□□□□ -0.11
PRPF18-202ENST00000378572 EIF3CQ99613 913 aaKnown RBP14.35□□□□□ -0.11
PRPF18-202ENST00000378572 ARID3AQ99856 593 aa14.35□□□□□ -0.11
PRPF18-202ENST00000378572 SYT11Q9BT88 431 aa14.35□□□□□ -0.11
PRPF18-202ENST00000378572 SLC32A1Q9H598 525 aa14.35□□□□□ -0.11
PRPF18-202ENST00000378572 HAUS4Q9H6D7 363 aa14.35□□□□□ -0.11
PRPF18-202ENST00000378572 PNPLA8Q9NP80 782 aa14.35□□□□□ -0.11
PRPF18-202ENST00000378572 FSCN3Q9NQT6 498 aa14.35□□□□□ -0.11
PRPF18-202ENST00000378572 TMEM74BQ9NUR3 256 aa14.35□□□□□ -0.11
PRPF18-202ENST00000378572 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.35□□□□□ -0.11
PRPF18-202ENST00000378572 CACNA2D2Q9NY47 1150 aa14.35□□□□□ -0.11
PRPF18-202ENST00000378572 KMT2BQ9UMN6 2715 aaPredicted RBP14.35□□□□□ -0.11
PRPF18-202ENST00000378572 ESPNB1AK53 854 aa14.34□□□□□ -0.11
PRPF18-202ENST00000378572 HHLA1C9JL84 531 aa14.34□□□□□ -0.11
PRPF18-202ENST00000378572 CCP110O43303 1012 aa14.34□□□□□ -0.11
PRPF18-202ENST00000378572 CILPO75339 1184 aa14.34□□□□□ -0.11
PRPF18-202ENST00000378572 PLEKP08567 350 aaPredicted RBP14.34□□□□□ -0.11
PRPF18-202ENST00000378572 PNMA6AP0CW24 399 aaPredicted RBP14.34□□□□□ -0.11
PRPF18-202ENST00000378572 CHRM1P11229 460 aaPredicted RBP14.34□□□□□ -0.11
PRPF18-202ENST00000378572 NDUFV2P19404 249 aa14.34□□□□□ -0.11
PRPF18-202ENST00000378572 CLCN1P35523 988 aa14.34□□□□□ -0.11
PRPF18-202ENST00000378572 PSEN1P49768 467 aa14.34□□□□□ -0.11
PRPF18-202ENST00000378572 SLC8A3P57103 927 aa14.34□□□□□ -0.11
PRPF18-202ENST00000378572 ARID5AQ03989 594 aa14.34□□□□□ -0.11
PRPF18-202ENST00000378572 GFPT1Q06210 699 aaPredicted RBP14.34□□□□□ -0.11
PRPF18-202ENST00000378572 STARD3Q14849 445 aa14.34□□□□□ -0.11
PRPF18-202ENST00000378572 PPP1R26Q5T8A7 1209 aaPredicted RBP14.34□□□□□ -0.11
PRPF18-202ENST00000378572 KIAA1211LQ6NV74 962 aa14.34□□□□□ -0.11
PRPF18-202ENST00000378572 VPS36Q86VN1 386 aa14.34□□□□□ -0.11
PRPF18-202ENST00000378572 RGL4Q8IZJ4 473 aa14.34□□□□□ -0.11
PRPF18-202ENST00000378572 CDK5RAP1Q96SZ6 601 aaKnown RBP14.34□□□□□ -0.11
PRPF18-202ENST00000378572 MARK1Q9P0L2 795 aa14.34□□□□□ -0.11
PRPF18-202ENST00000378572 CDX4O14627 284 aaPredicted RBP14.33□□□□□ -0.12
PRPF18-202ENST00000378572 ZNF217O75362 1048 aa14.33□□□□□ -0.12
PRPF18-202ENST00000378572 CEACAM1P13688 526 aa14.33□□□□□ -0.12
PRPF18-202ENST00000378572 SPINK2P20155 84 aa14.33□□□□□ -0.12
PRPF18-202ENST00000378572 CSRP1P21291 193 aaKnown RBP14.33□□□□□ -0.12
PRPF18-202ENST00000378572 KIF11P52732 1056 aa14.33□□□□□ -0.12
PRPF18-202ENST00000378572 ZNF132P52740 706 aa14.33□□□□□ -0.12
PRPF18-202ENST00000378572 PTK2Q05397 1052 aa14.33□□□□□ -0.12
PRPF18-202ENST00000378572 SPDYCQ5MJ68 293 aa14.33□□□□□ -0.12
PRPF18-202ENST00000378572 HSPA12BQ96MM6 686 aa14.33□□□□□ -0.12
PRPF18-202ENST00000378572 DUSP16Q9BY84 665 aa14.33□□□□□ -0.12
PRPF18-202ENST00000378572 SLC6A17Q9H1V8 727 aa14.33□□□□□ -0.12
PRPF18-202ENST00000378572 DEF6Q9H4E7 631 aa14.33□□□□□ -0.12
PRPF18-202ENST00000378572 STRIP2Q9ULQ0 834 aa14.33□□□□□ -0.12
PRPF18-202ENST00000378572 ADGRG1Q9Y653 693 aa14.33□□□□□ -0.12
PRPF18-202ENST00000378572 MYO18AQ92614 2054 aaKnown RBP14.33□□□□□ -0.12
PRPF18-202ENST00000378572 A0A1W2PQF6 199 aa14.32□□□□□ -0.12
PRPF18-202ENST00000378572 PRRT4C9JH25 899 aa14.32□□□□□ -0.12
PRPF18-202ENST00000378572 ZSCAN12O43309 604 aa14.32□□□□□ -0.12
PRPF18-202ENST00000378572 AKR1B10O60218 316 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms