RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 RDH8Q9NYR8 311 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 ANAPC2Q9UJX6 822 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 SLC9A8Q9Y2E8 581 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 B8ZZF3 427 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 ZNF185O15231 689 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 ITGA2P17301 1181 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 PTPRGP23470 1445 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 RRM1P23921 792 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 TIE1P35590 1138 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 E2F2Q14209 437 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 NAA30Q147X3 362 aaPredicted RBP8.93□□□□□ -0.98
LIG3-202ENST00000378526 KYAT1Q16773 422 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 ANKRD40Q6AI12 368 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 ZYG11AQ6WRX3 759 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 POMGNT2Q8NAT1 580 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 PI4K2AQ9BTU6 479 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 PRKD2Q9BZL6 878 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 KCNK4Q9NYG8 393 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 REREQ9P2R6 1566 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 CKLFQ9UBR5 152 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 PLEKHA6Q9Y2H5 1048 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 MGAT4DA6NG13 374 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 SMIM22K7EJ46 135 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 RBP1P09455 135 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 EPHB2P29323 1055 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 FOLH1Q04609 750 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 GALNTL6Q49A17 601 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 AAGABQ6PD74 315 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 MIER2Q8N344 545 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 SPIRE2Q8WWL2 714 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 CNOT7Q9UIV1 285 aaKnown RBP8.93□□□□□ -0.98
LIG3-202ENST00000378526 ZNF225Q9UK10 706 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 RNF112Q9ULX5 631 aa8.93□□□□□ -0.98
LIG3-202ENST00000378526 A0A1B0GVC2 190 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 VILLO15195 856 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 UBDO15205 165 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 VAMP4O75379 141 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 SOX11P35716 441 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 NIM1KQ8IY84 436 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 OR52L1Q8NGH7 329 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 PIH1D2Q8WWB5 315 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 OR2B2Q9GZK3 357 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 STARD7Q9NQZ5 370 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 MAB21L2Q9Y586 359 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 RIMS2Q9UQ26 1411 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 ISPDA4D126 451 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 ANXA5P08758 320 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 FGRP09769 529 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 GTF2E2P29084 291 aaKnown RBP8.92□□□□□ -0.98
LIG3-202ENST00000378526 ACADSBP45954 432 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 EIF4A2Q14240 407 aaKnown RBP8.92□□□□□ -0.98
LIG3-202ENST00000378526 SLC45A4Q5BKX6 768 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 STN1Q9H668 368 aaKnown RBP8.92□□□□□ -0.98
LIG3-202ENST00000378526 IKZF3Q9UKT9 509 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 PALD1Q9ULE6 856 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 CIB4A0PJX0 185 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 DFFAO00273 331 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 CASC3O15234 703 aaKnown RBP8.92□□□□□ -0.98
LIG3-202ENST00000378526 PLIN3O60664 434 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 HLA-DRAP01903 254 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 NR3C1P04150 777 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 OGNP20774 298 aaKnown RBP8.92□□□□□ -0.98
LIG3-202ENST00000378526 MPP3Q13368 585 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 BRMS1LQ5PSV4 323 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 PID1Q7Z2X4 250 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 GUF1Q8N442 669 aaKnown RBP8.92□□□□□ -0.98
LIG3-202ENST00000378526 ZNF548Q8NEK5 533 aaPredicted RBP8.92□□□□□ -0.98
LIG3-202ENST00000378526 QPCTLQ9NXS2 382 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 POLR3HQ9Y535 204 aaPredicted RBP8.92□□□□□ -0.98
LIG3-202ENST00000378526 ATP10DQ9P241 1426 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 A0A1W2PQJ5 194 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 C1orf196B1AJZ1 125 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 MID1O15344 667 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 PTPN7P35236 360 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 CDKL1Q00532 357 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 PRKAA1Q13131 559 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 NAB2Q15742 525 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 HPS6Q86YV9 775 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 C15orf40Q8WUR7 153 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 MIPEPQ99797 713 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 SLC22A4Q9H015 551 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 GANQ9H2C0 597 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 AKT3Q9Y243 479 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 TTC26A0AVF1 554 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 IRS4O14654 1257 aaPredicted RBP8.92□□□□□ -0.98
LIG3-202ENST00000378526 PMPCBO75439 489 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 RLN2P04090 185 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 MPOP05164 745 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 ITGA8P53708 1063 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 USP46P62068 366 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 AGKQ53H12 422 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 INTS6LQ5JSJ4 861 aaKnown RBP8.92□□□□□ -0.98
LIG3-202ENST00000378526 GPR158Q5T848 1215 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 MROH9Q5TGP6 573 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 TMEM270Q6UE05 265 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 FBXW8Q8N3Y1 598 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 TERB2Q8NHR7 220 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 AGAP11Q8TF27 550 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 SEPHS2Q99611 448 aa8.92□□□□□ -0.98
LIG3-202ENST00000378526 L2HGDHQ9H9P8 463 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms