RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 CA9Q16790 459 aa17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 SH2D4BQ5SQS7 431 aa17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 POU5F2Q8N7G0 328 aa17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 PCDH19Q8TAB3 1148 aa17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 SORCS3Q9UPU3 1222 aa17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 PCNTO95613 3336 aa17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 SOCS7O14512 581 aa17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 APOL1O14791 398 aa17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 CCNT2O60583 730 aaKnown RBP17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 STK10O94804 968 aaKnown RBP17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 SORBS2O94875 1100 aaKnown RBP17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 WASHC5Q12768 1159 aa17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 STX3Q13277 289 aa17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 ITGA9Q13797 1035 aa17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 SLC10A6Q3KNW5 377 aa17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 ANKRD20A4Q4UJ75 823 aa17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 ZCCHC23Q6ZST2 131 aa17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 USP6NLQ92738 828 aa17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 CCDC124Q96CT7 223 aaKnown RBP17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 KLC2Q9H0B6 622 aa17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 EPB41L1Q9H4G0 881 aa17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 CYP3A43Q9HB55 503 aa17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 IFT122Q9HBG6 1241 aa17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 BARX2Q9UMQ3 279 aaPredicted RBP17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 SNNO75324 88 aaPredicted RBP17.1■□□□□ 0.33
PCDHA1-201ENST00000378133 RFPL1O75677 317 aa17.1■□□□□ 0.33
PCDHA1-201ENST00000378133 PDE5AO76074 875 aa17.1■□□□□ 0.33
PCDHA1-201ENST00000378133 PFKMP08237 780 aa17.1■□□□□ 0.33
PCDHA1-201ENST00000378133 FOLH1Q04609 750 aa17.1■□□□□ 0.33
PCDHA1-201ENST00000378133 PPP6R3Q5H9R7 873 aaPredicted RBP17.1■□□□□ 0.33
PCDHA1-201ENST00000378133 UGT2A3Q6UWM9 527 aa17.1■□□□□ 0.33
PCDHA1-201ENST00000378133 CCDC33Q8N5R6 958 aa17.1■□□□□ 0.33
PCDHA1-201ENST00000378133 ICA1LQ8NDH6 482 aa17.1■□□□□ 0.33
PCDHA1-201ENST00000378133 APOL6Q9BWW8 343 aa17.1■□□□□ 0.33
PCDHA1-201ENST00000378133 RNPEPQ9H4A4 650 aa17.1■□□□□ 0.33
PCDHA1-201ENST00000378133 PCDH18Q9HCL0 1135 aa17.1■□□□□ 0.33
PCDHA1-201ENST00000378133 SLC15A5A6NIM6 579 aa17.1■□□□□ 0.33
PCDHA1-201ENST00000378133 USP2O75604 605 aaPredicted RBP17.1■□□□□ 0.33
PCDHA1-201ENST00000378133 TMCC1O94876 653 aa17.1■□□□□ 0.33
PCDHA1-201ENST00000378133 P4HA1P13674 534 aa17.1■□□□□ 0.33
PCDHA1-201ENST00000378133 ATICP31939 592 aa17.1■□□□□ 0.33
PCDHA1-201ENST00000378133 NOL9Q5SY16 702 aaKnown RBP17.1■□□□□ 0.33
PCDHA1-201ENST00000378133 FBXO16Q8IX29 292 aaPredicted RBP17.1■□□□□ 0.33
PCDHA1-201ENST00000378133 YIPF2Q9BWQ6 316 aa17.1■□□□□ 0.33
PCDHA1-201ENST00000378133 HSFX1Q9UBD0 423 aa17.1■□□□□ 0.33
PCDHA1-201ENST00000378133 MAD1L1Q9Y6D9 718 aa17.1■□□□□ 0.33
PCDHA1-201ENST00000378133 A0A087WZ62 844 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 PFDN1O60925 122 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 PROCP04070 461 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 PRKCHP24723 683 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 TMEM62Q0P6H9 643 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 VGLL4Q14135 290 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 PDK2Q15119 407 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 GRAMD1BQ3KR37 738 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 BOLA3Q53S33 107 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 PMF1Q6P1K2 205 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 FBXL19Q6PCT2 694 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 TRMT10BQ6PF06 316 aaKnown RBP17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 LCLAT1Q6UWP7 414 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 UNC5AQ6ZN44 842 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 GADL1Q6ZQY3 521 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 SCUBE3Q8IX30 993 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 PPP1R14CQ8TAE6 165 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 JADE3Q92613 823 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 DNAJC1Q96KC8 554 aaKnown RBP17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 FDXACB1Q9BRP7 624 aaPredicted RBP17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 GBA2Q9HCG7 927 aaPredicted RBP17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 PTTG2Q9NZH5 202 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 ZNF180Q9UJW8 692 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 TRDMT1O14717 391 aaKnown RBP17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 APOEP02649 317 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 BPGMP07738 259 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 CSH1P0DML2 217 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 CSH2P0DML3 217 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 COPAP53621 1224 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 IRX4P78413 519 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 MROH9Q5TGP6 573 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 RBM44Q6ZP01 1051 aaKnown RBP17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 DENND5BQ6ZUT9 1274 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 WDR75Q8IWA0 830 aaKnown RBP17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 NDUFAF2Q8N183 169 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 MPP5Q8N3R9 675 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 RAB3IL1Q8TBN0 382 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 RTP4Q96DX8 246 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 SNRNP25Q9BV90 132 aaKnown RBP17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 VRTNQ9H8Y1 702 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 CYP4F11Q9HBI6 524 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 PRMT7Q9NVM4 692 aaPredicted RBP17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 THAP1Q9NVV9 213 aa17.09■□□□□ 0.33
PCDHA1-201ENST00000378133 TRIP11Q15643 1979 aa17.08■□□□□ 0.33
PCDHA1-201ENST00000378133 LOC285556D6RIA3 1793 aa17.08■□□□□ 0.33
PCDHA1-201ENST00000378133 C15orf38-AP3S2A0A0A6YYH1 394 aa17.08■□□□□ 0.33
PCDHA1-201ENST00000378133 CCDC160A6NGH7 325 aa17.08■□□□□ 0.33
PCDHA1-201ENST00000378133 KLHL2O95198 593 aa17.08■□□□□ 0.33
PCDHA1-201ENST00000378133 METTL18O95568 372 aa17.08■□□□□ 0.33
PCDHA1-201ENST00000378133 RAG1P15918 1043 aa17.08■□□□□ 0.33
PCDHA1-201ENST00000378133 TGM2P21980 687 aa17.08■□□□□ 0.33
PCDHA1-201ENST00000378133 ARPINQ7Z6K5 226 aa17.08■□□□□ 0.33
PCDHA1-201ENST00000378133 GCNAQ96QF7 691 aa17.08■□□□□ 0.33
PCDHA1-201ENST00000378133 FRMD8Q9BZ67 464 aaPredicted RBP17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms