RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 SLC2A13Q96QE2 648 aa17.47■□□□□ 0.39
HMGN4-201ENST00000377575 CIPCQ9C0C6 399 aa17.47■□□□□ 0.39
HMGN4-201ENST00000377575 GANQ9H2C0 597 aa17.47■□□□□ 0.39
HMGN4-201ENST00000377575 ARRDC1-AS1Q9H2J1 176 aa17.47■□□□□ 0.39
HMGN4-201ENST00000377575 ELOVL2Q9NXB9 296 aa17.47■□□□□ 0.39
HMGN4-201ENST00000377575 THAP10Q9P2Z0 257 aaPredicted RBP17.47■□□□□ 0.39
HMGN4-201ENST00000377575 CLEC4EQ9ULY5 219 aa17.47■□□□□ 0.39
HMGN4-201ENST00000377575 INVSQ9Y283 1065 aa17.47■□□□□ 0.39
HMGN4-201ENST00000377575 STON1Q9Y6Q2 735 aa17.47■□□□□ 0.39
HMGN4-201ENST00000377575 TBL1XO60907 577 aa17.46■□□□□ 0.39
HMGN4-201ENST00000377575 DAB1O75553 588 aa17.46■□□□□ 0.39
HMGN4-201ENST00000377575 LSM8O95777 96 aaKnown RBP17.46■□□□□ 0.39
HMGN4-201ENST00000377575 IGLV3-25P01717 112 aa17.46■□□□□ 0.39
HMGN4-201ENST00000377575 ERBB2P04626 1255 aa17.46■□□□□ 0.39
HMGN4-201ENST00000377575 SLC2A3P11169 496 aa17.46■□□□□ 0.39
HMGN4-201ENST00000377575 CDK11BP21127 795 aaKnown RBP17.46■□□□□ 0.39
HMGN4-201ENST00000377575 HLA-FP30511 346 aa17.46■□□□□ 0.39
HMGN4-201ENST00000377575 SLC6A4P31645 630 aa17.46■□□□□ 0.39
HMGN4-201ENST00000377575 CDH5P33151 784 aaPredicted RBP17.46■□□□□ 0.39
HMGN4-201ENST00000377575 MPLP40238 635 aa17.46■□□□□ 0.39
HMGN4-201ENST00000377575 P2RY2P41231 377 aa17.46■□□□□ 0.39
HMGN4-201ENST00000377575 SGSHP51688 502 aa17.46■□□□□ 0.39
HMGN4-201ENST00000377575 PTPN20Q4JDL3 420 aa17.46■□□□□ 0.39
HMGN4-201ENST00000377575 NADSYN1Q6IA69 706 aa17.46■□□□□ 0.39
HMGN4-201ENST00000377575 CCDC117Q8IWD4 279 aaPredicted RBP17.46■□□□□ 0.39
HMGN4-201ENST00000377575 AHI1Q8N157 1196 aa17.46■□□□□ 0.39
HMGN4-201ENST00000377575 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.46■□□□□ 0.39
HMGN4-201ENST00000377575 RMDN1Q96DB5 314 aa17.46■□□□□ 0.39
HMGN4-201ENST00000377575 BTN2A3PQ96KV6 586 aa17.46■□□□□ 0.39
HMGN4-201ENST00000377575 FAM207AQ9NSI2 230 aaPredicted RBP17.46■□□□□ 0.39
HMGN4-201ENST00000377575 TMEM63CQ9P1W3 806 aa17.46■□□□□ 0.39
HMGN4-201ENST00000377575 CALCOCO1Q9P1Z2 691 aa17.46■□□□□ 0.39
HMGN4-201ENST00000377575 LIMA1Q9UHB6 759 aaKnown RBP17.46■□□□□ 0.39
HMGN4-201ENST00000377575 GGA2Q9UJY4 613 aa17.46■□□□□ 0.39
HMGN4-201ENST00000377575 CDV3Q9UKY7 258 aaKnown RBP17.46■□□□□ 0.39
HMGN4-201ENST00000377575 RAD54BQ9Y620 910 aa17.46■□□□□ 0.39
HMGN4-201ENST00000377575 GOLGA6L7A0A1B0GV03 622 aa17.45■□□□□ 0.38
HMGN4-201ENST00000377575 LGALS16A8MUM7 142 aa17.45■□□□□ 0.38
HMGN4-201ENST00000377575 BCKDHBP21953 392 aa17.45■□□□□ 0.38
HMGN4-201ENST00000377575 IL12RB1P42701 662 aa17.45■□□□□ 0.38
HMGN4-201ENST00000377575 POLR2FP61218 127 aaKnown RBP17.45■□□□□ 0.38
HMGN4-201ENST00000377575 SLC6A3Q01959 620 aa17.45■□□□□ 0.38
HMGN4-201ENST00000377575 MTA1Q13330 715 aa17.45■□□□□ 0.38
HMGN4-201ENST00000377575 PUM1Q14671 1186 aaKnown RBP eCLIP17.45■□□□□ 0.38
HMGN4-201ENST00000377575 TAF5Q15542 800 aa17.45■□□□□ 0.38
HMGN4-201ENST00000377575 RSPO4Q2I0M5 234 aaPredicted RBP17.45■□□□□ 0.38
HMGN4-201ENST00000377575 TAF3Q5VWG9 929 aa17.45■□□□□ 0.38
HMGN4-201ENST00000377575 RNF43Q68DV7 783 aa17.45■□□□□ 0.38
HMGN4-201ENST00000377575 SLC26A9Q7LBE3 791 aa17.45■□□□□ 0.38
HMGN4-201ENST00000377575 ZNF677Q86XU0 584 aa17.45■□□□□ 0.38
HMGN4-201ENST00000377575 MFN1Q8IWA4 741 aa17.45■□□□□ 0.38
HMGN4-201ENST00000377575 DEFB106AQ8N104 65 aa17.45■□□□□ 0.38
HMGN4-201ENST00000377575 ATP6V0D2Q8N8Y2 350 aa17.45■□□□□ 0.38
HMGN4-201ENST00000377575 C12orf50Q8NA57 414 aaPredicted RBP17.45■□□□□ 0.38
HMGN4-201ENST00000377575 ZNF397Q8NF99 534 aaPredicted RBP17.45■□□□□ 0.38
HMGN4-201ENST00000377575 EPS8L1Q8TE68 723 aa17.45■□□□□ 0.38
HMGN4-201ENST00000377575 RLN3Q8WXF3 142 aa17.45■□□□□ 0.38
HMGN4-201ENST00000377575 PCMTD1Q96MG8 357 aaPredicted RBP17.45■□□□□ 0.38
HMGN4-201ENST00000377575 PRICKLE1Q96MT3 831 aaPredicted RBP17.45■□□□□ 0.38
HMGN4-201ENST00000377575 SPAG5Q96R06 1193 aa17.45■□□□□ 0.38
HMGN4-201ENST00000377575 NUCKS1Q9H1E3 243 aaKnown RBP17.45■□□□□ 0.38
HMGN4-201ENST00000377575 ABCB8Q9NUT2 735 aa17.45■□□□□ 0.38
HMGN4-201ENST00000377575 DDIT4Q9NX09 232 aa17.45■□□□□ 0.38
HMGN4-201ENST00000377575 SLC12A6Q9UHW9 1150 aa17.45■□□□□ 0.38
HMGN4-201ENST00000377575 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.45■□□□□ 0.38
HMGN4-201ENST00000377575 DNAH14Q0VDD8 3507 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 MAP3K13O43283 966 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 SYNCRIPO60506 623 aaKnown RBP17.44■□□□□ 0.38
HMGN4-201ENST00000377575 ZNF217O75362 1048 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 GRAP2O75791 330 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 ZNF806P0C7X5 589 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 PABPC1P11940 636 aaKnown RBP17.44■□□□□ 0.38
HMGN4-201ENST00000377575 ZNF18P17022 549 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 NDUFV2P19404 249 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 ABCB4P21439 1286 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 CCR1P32246 355 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 KLK7P49862 253 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 CREB5Q02930 508 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 CDH18Q13634 790 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 ENPP2Q13822 863 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 ZNF234Q14588 700 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 MAP7D1Q3KQU3 841 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 ANO6Q4KMQ2 910 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 AASDHQ4L235 1098 aaPredicted RBP17.44■□□□□ 0.38
HMGN4-201ENST00000377575 ZC3H12AQ5D1E8 599 aaKnown RBP17.44■□□□□ 0.38
HMGN4-201ENST00000377575 MS4A13Q5J8X5 152 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 KIAA1211LQ6NV74 962 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 CAVIN1Q6NZI2 390 aaKnown RBP17.44■□□□□ 0.38
HMGN4-201ENST00000377575 SERPINA13PQ6UXR4 307 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 CHST9Q7L1S5 443 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 LPCAT2Q7L5N7 544 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 NOP9Q86U38 636 aaKnown RBP17.44■□□□□ 0.38
HMGN4-201ENST00000377575 CHSY1Q86X52 802 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 AOPEPQ8N6M6 819 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 NEK11Q8NG66 645 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 NETO1Q8TDF5 533 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 DDX1Q92499 740 aaKnown RBP17.44■□□□□ 0.38
HMGN4-201ENST00000377575 CD248Q9HCU0 757 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 VPS45Q9NRW7 570 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms