RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 XPNPEP3Q9NQH7 507 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 EEF2KO00418 725 aaKnown RBP13.31□□□□□ -0.28
USP11-204ENST00000377107 MAP3K7O43318 606 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 LUC7L3O95232 432 aaKnown RBP13.31□□□□□ -0.28
USP11-204ENST00000377107 MYL3P08590 195 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 VAV1P15498 845 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 ABL2P42684 1182 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 CCNA1P78396 465 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 SYPL2Q5VXT5 272 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 FASTKD5Q7L8L6 764 aaKnown RBP13.31□□□□□ -0.28
USP11-204ENST00000377107 C10orf107Q8IVU9 208 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 HASPINQ8TF76 798 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 SLC35F5Q8WV83 523 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 PYDC1Q8WXC3 89 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 DHRS4Q9BTZ2 278 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 MROH8Q9H579 483 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 C2CD2Q9Y426 696 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 SPTLC1O15269 473 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 SMIM24O75264 130 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 PSMG1O95456 288 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 HSPA4LO95757 839 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 NCAM1P13591 858 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 MSX2P35548 267 aaPredicted RBP13.3□□□□□ -0.28
USP11-204ENST00000377107 SLC18A1P54219 525 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 BCAT1P54687 386 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 BEX3Q00994 111 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 WASHC2DQ5SRD0 308 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 HFE2Q6ZVN8 426 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 SPNS2Q8IVW8 549 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 SCUBE1Q8IWY4 988 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 ADGRF2Q8IZF7 708 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 ZNF276Q8N554 614 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 SHKBP1Q8TBC3 707 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 SGF29Q96ES7 293 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 PHACTR1Q9C0D0 580 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 KIAA1257Q9ULG3 409 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 BEST1O76090 585 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 SLC1A6P48664 564 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 SLC18A2Q05940 514 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 CUL3Q13618 768 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 CES4AQ5XG92 561 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 WSCD1Q658N2 575 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 NOTUMQ6P988 496 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 SLC27A1Q6PCB7 646 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 SPATA6LQ8N4H0 392 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 RNF139Q8WU17 664 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 ZNF670Q9BS34 389 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 CYLDQ9NQC7 956 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 PPP2R3BQ9Y5P8 575 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 BCLAF3A2AJT9 711 aaKnown RBP13.3□□□□□ -0.28
USP11-204ENST00000377107 PDHXO00330 501 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 VHLP40337 213 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 STILQ15468 1287 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 CTC1Q2NKJ3 1217 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 TCHHL1Q5QJ38 904 aaPredicted RBP13.3□□□□□ -0.28
USP11-204ENST00000377107 C9orf57Q5W0N0 161 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 LRRC74BQ6ZQY2 392 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 STRA8Q7Z7C7 330 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 GSTCDQ8NEC7 633 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 KHSRPQ92945 711 aaKnown RBP eCLIP13.3□□□□□ -0.28
USP11-204ENST00000377107 TUBB6Q9BUF5 446 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 DDIT4Q9NX09 232 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 NUDT5Q9UKK9 219 aa13.3□□□□□ -0.28
USP11-204ENST00000377107 CXCL11O14625 94 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 BPGMP07738 259 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 SMPD1P17405 629 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 RALGPS1Q5JS13 557 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 RNF148Q8N7C7 305 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 AGAP2Q99490 1192 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 ATXN3LQ9H3M9 355 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 SLC39A10Q9ULF5 831 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 TRIP11Q15643 1979 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 SSC5DA1L4H1 1573 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 DCXO43602 365 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 DNAJC6O75061 913 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 SKIP12755 728 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 ZFXP17010 805 aaPredicted RBP13.29□□□□□ -0.28
USP11-204ENST00000377107 TKTP29401 623 aaKnown RBP13.29□□□□□ -0.28
USP11-204ENST00000377107 TKTL1P51854 596 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 KLC1Q07866 573 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 DGKDQ16760 1214 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 NCBP2-AS2Q69YL0 99 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 RIPOR1Q6ZS17 1223 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 ANKRD52Q8NB46 1076 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 SSU72Q9NP77 194 aaKnown RBP13.29□□□□□ -0.28
USP11-204ENST00000377107 ARHGEF4Q9NR80 690 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 TMEM216Q9P0N5 145 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 PCDHA11Q9Y5I1 949 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 PDE4DIPQ5VU43 2346 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 CCL15-CCL14A0A0B4J2E2 113 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 SMIM28A0A1B0GU29 152 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 DPPA5A6NC42 116 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 SPDYE5A6NIY4 337 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 SORBS2O94875 1100 aaKnown RBP13.29□□□□□ -0.28
USP11-204ENST00000377107 PROCP04070 461 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 USP17L7P0C7H9 530 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 TPI1P60174 286 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 INCA1Q0VD86 236 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 SNAPC2Q13487 334 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 TAZQ16635 292 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms