RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 ABRAQ8N0Z2 381 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 JADE3Q92613 823 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 RMI1Q9H9A7 625 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 PTPRHQ9HD43 1115 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 DMTF1Q9Y222 760 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 GINS2Q9Y248 185 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 TMEM191CA6NGB0 347 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 DENRO43583 198 aaKnown RBP13.31□□□□□ -0.28
MSH5-204ENST00000375755 SNNO75324 88 aaPredicted RBP13.31□□□□□ -0.28
MSH5-204ENST00000375755 WEE2P0C1S8 567 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 TMEM191BP0C7N4 346 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 ALDH1A3P47895 512 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 CUL2Q13617 745 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 WDR44Q5JSH3 913 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 MARCH8Q5T0T0 291 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 USP37Q86T82 979 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 BRSK2Q8IWQ3 736 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 UNC45BQ8IWX7 931 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 DCUN1D1Q96GG9 259 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 TINF2Q9BSI4 451 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 FZD8Q9H461 694 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 PARVAQ9NVD7 372 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 PCDHB4Q9Y5E5 795 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 H3BRB1 525 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 EFNA5P52803 228 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 MYBPC1Q00872 1141 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 CDK18Q07002 472 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 ORC1Q13415 861 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 ZPBP2Q6X784 338 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 PLEKHH3Q7Z736 793 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 PPM1NQ8N819 430 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 PPTC7Q8NI37 304 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 HSPBAP1Q96EW2 488 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 APOL6Q9BWW8 343 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 TUT1Q9H6E5 874 aaKnown RBP13.31□□□□□ -0.28
MSH5-204ENST00000375755 VTA1Q9NP79 307 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 CPSF3Q9UKF6 684 aaKnown RBP13.31□□□□□ -0.28
MSH5-204ENST00000375755 APPL1Q9UKG1 709 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 TRIP12Q14669 1992 aaPredicted RBP13.31□□□□□ -0.28
MSH5-204ENST00000375755 TRIP11Q15643 1979 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 LDHAP00338 332 aaKnown RBP13.31□□□□□ -0.28
MSH5-204ENST00000375755 CD48P09326 243 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 HOXC6P09630 235 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 TSHRP16473 764 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 PTPN7P35236 360 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 SERPINB8P50452 374 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 COPAP53621 1224 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 BASP1P80723 227 aaKnown RBP13.31□□□□□ -0.28
MSH5-204ENST00000375755 WASHC5Q12768 1159 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 PEX6Q13608 980 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 TTC39BQ5VTQ0 682 aaPredicted RBP13.31□□□□□ -0.28
MSH5-204ENST00000375755 KLHL35Q6PF15 583 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 CTAGE3PQ8IX95 158 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 TTC13Q8NBP0 860 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 ACTRT2Q8TDY3 377 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 VCPIP1Q96JH7 1222 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 ZNF778Q96MU6 729 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 MRPS26Q9BYN8 205 aaKnown RBP13.31□□□□□ -0.28
MSH5-204ENST00000375755 CDT1Q9H211 546 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 SETD4Q9NVD3 440 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 SSX2IPQ9Y2D8 614 aa13.31□□□□□ -0.28
MSH5-204ENST00000375755 CXorf49A8MYA2 514 aaPredicted RBP13.3□□□□□ -0.28
MSH5-204ENST00000375755 ACKR2O00590 384 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 OGTO15294 1046 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 SUPT3HO75486 399 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 ITGBL1O95965 494 aaPredicted RBP13.3□□□□□ -0.28
MSH5-204ENST00000375755 C1QAP02745 245 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 FUT4P22083 530 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 PROZP22891 400 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 RAP1GAPP47736 663 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 BMPR2Q13873 1038 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 LRRC38Q5VT99 294 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 IYDQ6PHW0 289 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 TSHZ1Q6ZSZ6 1077 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 TRIM67Q6ZTA4 783 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 KBTBD6Q86V97 674 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 SLC26A11Q86WA9 606 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 ZBTB8BQ8NAP8 495 aaPredicted RBP13.3□□□□□ -0.28
MSH5-204ENST00000375755 RSAD2Q8WXG1 361 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 MCEEQ96PE7 176 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 TSPYL2Q9H2G4 693 aaPredicted RBP13.3□□□□□ -0.28
MSH5-204ENST00000375755 RBM47A0AV96 593 aaKnown RBP13.3□□□□□ -0.28
MSH5-204ENST00000375755 DYNC1LI2O43237 492 aaPredicted RBP13.3□□□□□ -0.28
MSH5-204ENST00000375755 AVILO75366 819 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 RFPL1O75677 317 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 CRTAMO95727 393 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 MMP3P08254 477 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 ZNF157P51786 506 aaPredicted RBP13.3□□□□□ -0.28
MSH5-204ENST00000375755 C1QBPQ07021 282 aaKnown RBP13.3□□□□□ -0.28
MSH5-204ENST00000375755 AMHR2Q16671 573 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 MPZL3Q6UWV2 235 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 DEFB107AQ8IZN7 70 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 OR6J1Q8NGC5 347 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 KCNN1Q92952 543 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 PPP1R14BQ96C90 147 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 ZFRQ96KR1 1074 aaKnown RBP13.3□□□□□ -0.28
MSH5-204ENST00000375755 PARK7Q99497 189 aaKnown RBP13.3□□□□□ -0.28
MSH5-204ENST00000375755 CDHR5Q9HBB8 845 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 ARHGEF38Q9NXL2 777 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 SLC45A1Q9Y2W3 748 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms