RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 SERPINB6P35237 376 aa14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 IDH3AP50213 366 aa14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 EFNA5P52803 228 aa14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 GBE1Q04446 702 aa14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 PPM1JQ5JR12 505 aa14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 ARCQ7LC44 396 aa14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 SESTD1Q86VW0 696 aa14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 ST13P4Q8IZP2 240 aaPredicted RBP14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 RAB3IL1Q8TBN0 382 aa14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 KLHL4Q9C0H6 718 aa14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 IL1RAPL1Q9NZN1 696 aa14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 CPA4Q9UI42 421 aa14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 BCLAF3A2AJT9 711 aaKnown RBP14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 WDR27A2RRH5 827 aa14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 TPP1O14773 563 aa14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 UQCRBP14927 111 aa14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 CD1EP15812 388 aa14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 UBA1P22314 1058 aaKnown RBP14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 SLC10A2Q12908 348 aaPredicted RBP14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 PDE1CQ14123 709 aaPredicted RBP14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 TRIP10Q15642 601 aa14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 SLC5A9Q2M3M2 681 aa14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 CASC4Q6P4E1 433 aa14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 ADGRG6Q86SQ4 1221 aa14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 TRIM50Q86XT4 487 aa14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 C10orf107Q8IVU9 208 aa14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 DEFB107AQ8IZN7 70 aa14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 ARHGAP18Q8N392 663 aa14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 PHTF2Q8N3S3 785 aa14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 NDNQ99608 321 aa14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 FRMD8Q9BZ67 464 aaPredicted RBP14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 CDH22Q9UJ99 828 aa14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 PCDHA11Q9Y5I1 949 aa14.54□□□□□ -0.08
CLCNKA-202ENST00000375692 DNAJC25-GNG10A0A024R161 153 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 IGKV6D-21A0A0A0MT36 114 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 ADCY6O43306 1168 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 CCNT2O60583 730 aaKnown RBP14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 CILPO75339 1184 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 CSDE1O75534 798 aaKnown RBP14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 KLHL2O95198 593 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 L1CAMP32004 1257 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 MAGEA3P43357 314 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 DYNC1I2Q13409 638 aaKnown RBP14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 SURF1Q15526 300 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 PGM2L1Q6PCE3 622 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 SATL1Q86VE3 508 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 MAP7D3Q8IWC1 876 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 C12orf29Q8N999 325 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 NETO2Q8NC67 525 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 MAN1C1Q9NR34 630 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 ZDHHC7Q9NXF8 308 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 POMPQ9Y244 141 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 TBC1D30Q9Y2I9 924 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 PSAT1Q9Y617 370 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 MGAMO43451 1857 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 INO80B-WBP1J3KQ70 363 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 B4GALT4O60513 344 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 RAG1P15918 1043 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 TFE3P19532 575 aaPredicted RBP14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 ITGAXP20702 1163 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 MAGEA6P43360 314 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 PCLAFQ15004 111 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 LY6KQ17RY6 165 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 MMEL1Q495T6 779 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 FBXL19Q6PCT2 694 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 FRMD7Q6ZUT3 714 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 MCUQ8NE86 351 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 TFB1MQ8WVM0 346 aaKnown RBP14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 NCSTNQ92542 709 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 EZH1Q92800 747 aaPredicted RBP14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 NLRP4Q96MN2 994 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 SORT1Q99523 831 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 SNRNP25Q9BV90 132 aaKnown RBP14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 INO80BQ9C086 356 aaPredicted RBP14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 ZNF358Q9NW07 568 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 MOCS1Q9NZB8 636 aa14.53□□□□□ -0.08
CLCNKA-202ENST00000375692 PLIN3O60664 434 aa14.52□□□□□ -0.08
CLCNKA-202ENST00000375692 F7P08709 466 aaPredicted RBP14.52□□□□□ -0.08
CLCNKA-202ENST00000375692 EDNRBP24530 442 aa14.52□□□□□ -0.08
CLCNKA-202ENST00000375692 TCF7P36402 384 aaPredicted RBP14.52□□□□□ -0.08
CLCNKA-202ENST00000375692 SERPINB9P50453 376 aa14.52□□□□□ -0.08
CLCNKA-202ENST00000375692 CBLBQ13191 982 aa14.52□□□□□ -0.08
CLCNKA-202ENST00000375692 ATF7IP2Q5U623 682 aa14.52□□□□□ -0.08
CLCNKA-202ENST00000375692 SLC9A4Q6AI14 798 aa14.52□□□□□ -0.08
CLCNKA-202ENST00000375692 RGMBQ6NW40 437 aa14.52□□□□□ -0.08
CLCNKA-202ENST00000375692 MPZL3Q6UWV2 235 aa14.52□□□□□ -0.08
CLCNKA-202ENST00000375692 B4GALNT2Q8NHY0 566 aa14.52□□□□□ -0.08
CLCNKA-202ENST00000375692 TRAPPC12Q8WVT3 735 aa14.52□□□□□ -0.08
CLCNKA-202ENST00000375692 APBB2Q92870 758 aa14.52□□□□□ -0.08
CLCNKA-202ENST00000375692 LRRC39Q96DD0 335 aa14.52□□□□□ -0.08
CLCNKA-202ENST00000375692 PGLYRP2Q96PD5 576 aa14.52□□□□□ -0.08
CLCNKA-202ENST00000375692 OXCT2Q9BYC2 517 aaPredicted RBP14.52□□□□□ -0.08
CLCNKA-202ENST00000375692 MROH8Q9H579 483 aa14.52□□□□□ -0.08
CLCNKA-202ENST00000375692 PDGFCQ9NRA1 345 aa14.52□□□□□ -0.08
CLCNKA-202ENST00000375692 SORCS3Q9UPU3 1222 aa14.52□□□□□ -0.08
CLCNKA-202ENST00000375692 MYO18AQ92614 2054 aaKnown RBP14.52□□□□□ -0.08
CLCNKA-202ENST00000375692 FARP2O94887 1054 aaPredicted RBP14.52□□□□□ -0.09
CLCNKA-202ENST00000375692 ARIH2O95376 493 aa14.52□□□□□ -0.09
CLCNKA-202ENST00000375692 PGM3O95394 542 aa14.52□□□□□ -0.09
CLCNKA-202ENST00000375692 PRKCGP05129 697 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms