RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 TMCO4Q5TGY1 634 aa18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 KRT80Q6KB66 452 aa18.44■□□□□ 0.54
PTPDC1-202ENST00000375360 SF3B1O75533 1304 aaKnown RBP eCLIP18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 LTBP3Q9NS15 1303 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 BTNL10A8MVZ5 291 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 SEPT4O43236 478 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 CDH17Q12864 832 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 TAF5Q15542 800 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 PMF1Q6P1K2 205 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 UBXN6Q9BZV1 441 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 NOP53Q9NZM5 478 aaKnown RBP18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 ZNF112Q9UJU3 913 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 RBAK-RBAKDNI3L0D1 243 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 TIMM44O43615 452 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 OR1D2P34982 312 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 RAD23BP54727 409 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 NPLOC4Q8TAT6 608 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 ZNF516Q92618 1163 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 HIPK3Q9H422 1215 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 FZD8Q9H461 694 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 SIX2Q9NPC8 291 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 HEY2Q9UBP5 337 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 SLC24A2Q9UI40 661 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 ACOT9Q9Y305 439 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 COL1A2P08123 1366 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 hCG_1818297A0A087WSY0 165 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 FSCN2O14926 492 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 AMHP03971 560 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 BGNP21810 368 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 KCNA3P22001 575 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 RPL9P32969 192 aaKnown RBP18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 ATP5C1P36542 298 aaKnown RBP18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 FAAP100Q0VG06 881 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 LRRC43Q8N309 656 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 PSD3Q9NYI0 1048 aa18.43■□□□□ 0.54
PTPDC1-202ENST00000375360 MRPS5P82675 430 aaKnown RBP18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 KBTBD12Q3ZCT8 623 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 BBS12Q6ZW61 710 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 TCP10LQ8TDR4 215 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 DUSP16Q9BY84 665 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 CA12O43570 354 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 TRIM16O95361 564 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 SPATA31D3P0C874 917 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 MATKP42679 507 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 DUSP4Q13115 394 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 LRRC36Q1X8D7 754 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 TMEM259Q4ZIN3 620 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 SPATA31D4Q6ZUB0 917 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 OR52K1Q8NGK4 314 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 GPAMQ9HCL2 828 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 TRMT6Q9UJA5 497 aaKnown RBP18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 C5P01031 1676 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 GLRA3O75311 464 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 RTN3O95197 1032 aaPredicted RBP18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 JAM2P57087 298 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 SLC45A4Q5BKX6 768 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 ANKRD20A2Q5SQ80 823 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 ANKRD20A1Q5TYW2 823 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 DCLRE1AQ6PJP8 1040 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 LCLAT1Q6UWP7 414 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 CPNE8Q86YQ8 564 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 DPEP3Q9H4B8 488 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 IL1RL2Q9HB29 575 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 CHKAP35790 457 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 LILRA4P59901 499 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 ANKRD20A4Q4UJ75 823 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 LRRC8EQ6NSJ5 796 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 NUP93Q8N1F7 819 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 LPIN3Q9BQK8 851 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 PCYOX1Q9UHG3 505 aa18.42■□□□□ 0.54
PTPDC1-202ENST00000375360 E2F6O75461 281 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 GRIK3Q13003 919 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 RETSATQ6NUM9 610 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 LRRC19Q9H756 370 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 ETNK2Q9NVF9 386 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 RPTORQ8N122 1335 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 RNF103-CHMP3A0A140T963 221 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 RALBP11234 206 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 ITGB6P18564 788 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 EEF1B2P24534 225 aaKnown RBP18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 LMO2P25791 158 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 PEX19P40855 299 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 AGAP9Q5VTM2 703 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 PRPF39Q86UA1 669 aaKnown RBP18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 ITIH5Q86UX2 942 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 ZNF558Q96NG5 402 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 STOML1Q9UBI4 398 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 NR2E1Q9Y466 385 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 ERVK-10P10266 1014 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 TARSP26639 723 aaKnown RBP18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 HOXD13P35453 343 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 KPNA1P52294 538 aaPredicted RBP18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 PLIN5Q00G26 463 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 GTF2H3Q13889 308 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 HIC1Q14526 733 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 ZNF470Q6ECI4 717 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 PLEKHA7Q6IQ23 1121 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 IFNL1Q8IU54 200 aa18.41■□□□□ 0.54
PTPDC1-202ENST00000375360 MPP6Q9NZW5 540 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms