RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 OSMRQ99650 979 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 PORCNQ9H237 461 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 ASB7Q9H672 318 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 KRCC1Q9NPI7 259 aaPredicted RBP12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 TCF7L2Q9NQB0 619 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 ITGA11Q9UKX5 1188 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 MYH10P35580 1976 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 SPEF2Q9C093 1822 aa12.58□□□□□ -0.4
NPLOC4-202ENST00000374747 SLC15A5A6NIM6 579 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 MFSD10Q14728 455 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 PACS2Q86VP3 889 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 BLOC1S5Q8TDH9 187 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 KCTD14Q9BQ13 255 aaPredicted RBP12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 CINPQ9BW66 212 aaPredicted RBP12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 COLEC11Q9BWP8 271 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 PAIP1Q9H074 479 aaKnown RBP12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 CYP4F12Q9HCS2 524 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 C6orf203Q9P0P8 240 aaPredicted RBP12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 TMEM150BA6NC51 233 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 FCHO1O14526 889 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 DNALI1O14645 258 aaPredicted RBP12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 UBDO15205 165 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 PSMB9P28065 219 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 AXLP30530 894 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 TALDO1P37837 337 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 ALDH6A1Q02252 535 aaKnown RBP12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 C1DQ13901 141 aaKnown RBP12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 TMC3Q7Z5M5 1100 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 OSCP1Q8WVF1 389 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 TRIM63Q969Q1 353 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 FAM192AQ9GZU8 254 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 DDIT4Q9NX09 232 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 SHOC2Q9UQ13 582 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 HOXA2O43364 376 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 KLRC4O43908 158 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 EIF2B2P49770 351 aaKnown RBP12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 ZNF280AP59817 542 aaPredicted RBP12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 MYL6P60660 151 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 IL5RAQ01344 420 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 AGKQ53H12 422 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 STK32AQ8WU08 396 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 USP13Q92995 863 aaPredicted RBP12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 OXNAD1Q96HP4 312 aaPredicted RBP12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 COQ7Q99807 217 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 TINF2Q9BSI4 451 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 MMADHCQ9H3L0 296 aaPredicted RBP12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 WDCPQ9H6R7 721 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 TMEM134Q9H6X4 195 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 C1orf232A0A0U1RR37 186 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 SPATA31C2B4DYI2 1134 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 UPP2O95045 317 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 ZNF682O95780 498 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 LGALS2P05162 132 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 PAX7P23759 505 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 ADCYAP1R1P41586 468 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 ST13P50502 369 aaKnown RBP12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 ZNF844Q08AG5 666 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 ZNF467Q7Z7K2 595 aaPredicted RBP12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 IRF2BP1Q8IU81 584 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 ATG16L2Q8NAA4 619 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 DNAJC19Q96DA6 116 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 HSD17B14Q9BPX1 270 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 PCDH9Q9HC56 1237 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 COMMD8Q9NX08 183 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 CACNA2D2Q9NY47 1150 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 KLHL3Q9UH77 587 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 IGKV6D-41A0A0C4DH26 115 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 CES2O00748 559 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 FSBPO95073 299 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 CXCL8P10145 99 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 ITGB5P18084 799 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 RRM1P23921 792 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 CCT8P50990 548 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 PURAQ00577 322 aaKnown RBP12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 SH3BP5LQ7L8J4 393 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 BRSK2Q8IWQ3 736 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 OMA1Q96E52 524 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 GINS4Q9BRT9 223 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 RERGLQ9H628 205 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 POLE3Q9NRF9 147 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 CISHQ9NSE2 258 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 DRG1Q9Y295 367 aaKnown RBP12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 COL4A1P02462 1669 aa12.57□□□□□ -0.4
NPLOC4-202ENST00000374747 ZNF541Q9H0D2 1346 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 IFNA14P01570 189 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 HSMCR30P0CW71 290 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 SLC2A3P11169 496 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 HARS2P49590 506 aaKnown RBP12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 GCNT1Q02742 428 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 MPP3Q13368 585 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 ZFP1Q6P2D0 407 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 NT5DC4Q86YG4 428 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 SVOPQ8N4V2 548 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 PPP1R10Q96QC0 940 aaKnown RBP12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 SEPT5Q99719 369 aaPredicted RBP12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 DCDC2CA8MYV0 355 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 B3GAT3O94766 335 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 MAP3K6O95382 1288 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 MED26O95402 600 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms