RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 SLC40A1Q9NP59 571 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 FAM105AQ9NUU6 356 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 DDX43Q9NXZ2 648 aaKnown RBP12.49□□□□□ -0.41
HMGCL-202ENST00000374487 FZD10Q9ULW2 581 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 STAP1Q9ULZ2 295 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 PHTF1Q9UMS5 762 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 SLC12A4Q9UP95 1085 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 TRPV2Q9Y5S1 764 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 M0QYT0 321 aa12.48□□□□□ -0.41
HMGCL-202ENST00000374487 CAPN9O14815 690 aa12.48□□□□□ -0.41
HMGCL-202ENST00000374487 DNAJC8O75937 253 aaPredicted RBP12.48□□□□□ -0.41
HMGCL-202ENST00000374487 ARHGEF15O94989 841 aa12.48□□□□□ -0.41
HMGCL-202ENST00000374487 FAM163BP0C2L3 166 aa12.48□□□□□ -0.41
HMGCL-202ENST00000374487 NOS2P35228 1153 aa12.48□□□□□ -0.41
HMGCL-202ENST00000374487 NDUFV1P49821 464 aa12.48□□□□□ -0.41
HMGCL-202ENST00000374487 NME3Q13232 169 aa12.48□□□□□ -0.41
HMGCL-202ENST00000374487 LRIT3Q3SXY7 679 aa12.48□□□□□ -0.41
HMGCL-202ENST00000374487 PLEKHG4Q58EX7 1191 aa12.48□□□□□ -0.41
HMGCL-202ENST00000374487 CAND1Q86VP6 1230 aaKnown RBP12.48□□□□□ -0.41
HMGCL-202ENST00000374487 SLC44A1Q8WWI5 657 aa12.48□□□□□ -0.41
HMGCL-202ENST00000374487 QKIQ96PU8 341 aaKnown RBP eCLIP12.48□□□□□ -0.41
HMGCL-202ENST00000374487 GAD1Q99259 594 aa12.48□□□□□ -0.41
HMGCL-202ENST00000374487 FERMT1Q9BQL6 677 aa12.48□□□□□ -0.41
HMGCL-202ENST00000374487 HAUS2Q9NVX0 235 aa12.48□□□□□ -0.41
HMGCL-202ENST00000374487 DTLQ9NZJ0 730 aa12.48□□□□□ -0.41
HMGCL-202ENST00000374487 CACNG4Q9UBN1 327 aa12.48□□□□□ -0.41
HMGCL-202ENST00000374487 PRKAG3Q9UGI9 489 aa12.48□□□□□ -0.41
HMGCL-202ENST00000374487 STARD13Q9Y3M8 1113 aa12.48□□□□□ -0.41
HMGCL-202ENST00000374487 MAD1L1Q9Y6D9 718 aa12.48□□□□□ -0.41
HMGCL-202ENST00000374487 CHD9Q3L8U1 2897 aa12.48□□□□□ -0.41
HMGCL-202ENST00000374487 MEIS3P2A8K0S8 358 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 GABRDO14764 452 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 TM9SF1O15321 606 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 DAB1O75553 588 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 UBOX5O94941 541 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 METTL18O95568 372 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 MAGEA6P43360 314 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 LHX1P48742 406 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 TKTL1P51854 596 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 WDR5P61964 334 aaKnown RBP12.47□□□□□ -0.41
HMGCL-202ENST00000374487 DEUP1Q05D60 604 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 NCBP2-AS2Q69YL0 99 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 CGB2Q6NT52 195 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 DSTYKQ6XUX3 929 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 RGS9BPQ6ZS82 235 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 CLEC20AQ6ZU45 233 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 RPAINQ86UA6 219 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 RTN4RL1Q86UN2 441 aaPredicted RBP12.47□□□□□ -0.41
HMGCL-202ENST00000374487 LRRC6Q86X45 466 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 PSTKQ8IV42 348 aaKnown RBP12.47□□□□□ -0.41
HMGCL-202ENST00000374487 PPM1NQ8N819 430 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 MCUQ8NE86 351 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 TCP10LQ8TDR4 215 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 HTR3CQ8WXA8 447 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 KCTD13Q8WZ19 329 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 SPOCK2Q92563 424 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 LRRC39Q96DD0 335 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 POPDC2Q9HBU9 364 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 KRT82Q9NSB4 513 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 KLC4Q9NSK0 619 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 RCOR3Q9P2K3 495 aaPredicted RBP12.47□□□□□ -0.41
HMGCL-202ENST00000374487 GRID1Q9ULK0 1009 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 YBX2Q9Y2T7 364 aaKnown RBP12.47□□□□□ -0.41
HMGCL-202ENST00000374487 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.47□□□□□ -0.41
HMGCL-202ENST00000374487 A0A1W2PPC1 479 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 WDR91A4D1P6 747 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 H3BRJ5 948 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 TRDMT1O14717 391 aaKnown RBP12.47□□□□□ -0.41
HMGCL-202ENST00000374487 HGSO14964 777 aaPredicted RBP12.47□□□□□ -0.41
HMGCL-202ENST00000374487 CREB3O43889 395 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 LPXNO60711 386 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 RASSF9O75901 435 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 STK10O94804 968 aaKnown RBP12.47□□□□□ -0.41
HMGCL-202ENST00000374487 IGFBP6P24592 240 aaPredicted RBP12.47□□□□□ -0.41
HMGCL-202ENST00000374487 RFC2P35250 354 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 CLCNKBP51801 687 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 SARNPP82979 210 aaKnown RBP12.47□□□□□ -0.41
HMGCL-202ENST00000374487 LGSNQ5TDP6 509 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 PAQR9Q6ZVX9 377 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 SLC26A11Q86WA9 606 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 TMEM86AQ8N2M4 240 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 AGGF1Q8N302 714 aaeCLIP12.47□□□□□ -0.41
HMGCL-202ENST00000374487 BANPQ8N9N5 519 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 MZB1Q8WU39 189 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 LINC01599Q8WXQ3 324 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 PBX4Q9BYU1 374 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 PRDM16Q9HAZ2 1276 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 RXFP1Q9HBX9 757 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 PNPLA8Q9NP80 782 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 SLCO1B3Q9NPD5 702 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 CHST12Q9NRB3 414 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.47□□□□□ -0.41
HMGCL-202ENST00000374487 PADI3Q9ULW8 664 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 TIMM13Q9Y5L4 95 aaPredicted RBP12.47□□□□□ -0.41
HMGCL-202ENST00000374487 SLC4A7Q9Y6M7 1214 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 CHD7Q9P2D1 2997 aa12.47□□□□□ -0.41
HMGCL-202ENST00000374487 HACD1B0YJ81 288 aa12.46□□□□□ -0.41
HMGCL-202ENST00000374487 MGEA5O60502 916 aa12.46□□□□□ -0.41
HMGCL-202ENST00000374487 AP1G2O75843 785 aa12.46□□□□□ -0.41
HMGCL-202ENST00000374487 KRT37O76014 449 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms