RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 CCDC33Q8N5R6 958 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 CCDC89Q8N998 374 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 FAM71DQ8N9W8 422 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 OVCA2Q8WZ82 227 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 RNF34Q969K3 372 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 RTP4Q96DX8 246 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 TRMT2BQ96GJ1 504 aaKnown RBP16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 SNF8Q96H20 258 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 LBHD1Q9BQE6 289 aaPredicted RBP16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 PRDM16Q9HAZ2 1276 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 MAFFQ9ULX9 164 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 HPCAL4Q9UM19 191 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 LZTS1Q9Y250 596 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 MTCL1Q9Y4B5 1905 aaKnown RBP16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 DOCK4Q8N1I0 1966 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 MYO7AQ13402 2215 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 CEP290O15078 2479 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 DENND4CQ5VZ89 1909 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 BCLAF3A2AJT9 711 aaKnown RBP16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 C5orf67F2Z3F1 127 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 SGK1O00141 431 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 TLR5O60602 858 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 ITIH2P19823 946 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 HOXC13P31276 330 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 RPL22P35268 128 aaKnown RBP16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 HSPA9P38646 679 aaKnown RBP16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 ALDH1A3P47895 512 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 TPI1P60174 286 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 CREMQ03060 361 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 TRIP4Q15650 581 aaPredicted RBP16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 C10orf120Q5SQS8 335 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 PIK3R6Q5UE93 754 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 DNAJB7Q7Z6W7 309 aaPredicted RBP16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 C14orf80Q86SX3 495 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 NPWQ8N729 165 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 DPF3Q92784 378 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 TCF25Q9BQ70 676 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 KLC2Q9H0B6 622 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 ZNF334Q9HCZ1 680 aaPredicted RBP16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 OLA1Q9NTK5 396 aaKnown RBP16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 MARCH2Q9P0N8 246 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 HS3ST4Q9Y661 456 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.21■□□□□ 0.19
NIPAL3-204ENST00000374399 C2orf71A6NGG8 1288 aa16.21■□□□□ 0.19
NIPAL3-204ENST00000374399 RBL1P28749 1068 aa16.21■□□□□ 0.19
NIPAL3-204ENST00000374399 ADCY8P40145 1251 aa16.21■□□□□ 0.19
NIPAL3-204ENST00000374399 TNNT3P45378 269 aaPredicted RBP16.21■□□□□ 0.19
NIPAL3-204ENST00000374399 ITGA8P53708 1063 aa16.21■□□□□ 0.19
NIPAL3-204ENST00000374399 TBX4P57082 545 aa16.21■□□□□ 0.19
NIPAL3-204ENST00000374399 XRCC4Q13426 336 aa16.21■□□□□ 0.19
NIPAL3-204ENST00000374399 SHHQ15465 462 aa16.21■□□□□ 0.19
NIPAL3-204ENST00000374399 UAP1Q16222 522 aaPredicted RBP16.21■□□□□ 0.19
NIPAL3-204ENST00000374399 P3H1Q32P28 736 aa16.21■□□□□ 0.19
NIPAL3-204ENST00000374399 DARS2Q6PI48 645 aaKnown RBP16.21■□□□□ 0.19
NIPAL3-204ENST00000374399 TMC7Q7Z402 723 aa16.21■□□□□ 0.19
NIPAL3-204ENST00000374399 TMC3Q7Z5M5 1100 aa16.21■□□□□ 0.19
NIPAL3-204ENST00000374399 MRPL43Q8N983 215 aaKnown RBP16.21■□□□□ 0.19
NIPAL3-204ENST00000374399 FMO2Q99518 471 aa16.21■□□□□ 0.19
NIPAL3-204ENST00000374399 SIK2Q9H0K1 926 aa16.21■□□□□ 0.19
NIPAL3-204ENST00000374399 IL21Q9HBE4 155 aa16.21■□□□□ 0.19
NIPAL3-204ENST00000374399 SSX2IPQ9Y2D8 614 aa16.21■□□□□ 0.19
NIPAL3-204ENST00000374399 DOCK6Q96HP0 2047 aa16.2■□□□□ 0.18
NIPAL3-204ENST00000374399 H7C0C1 242 aa16.2■□□□□ 0.18
NIPAL3-204ENST00000374399 PRRG1O14668 218 aa16.2■□□□□ 0.18
NIPAL3-204ENST00000374399 IFNB1P01574 187 aa16.2■□□□□ 0.18
NIPAL3-204ENST00000374399 MAGEA10P43363 369 aaPredicted RBP16.2■□□□□ 0.18
NIPAL3-204ENST00000374399 ATP5OP48047 213 aa16.2■□□□□ 0.18
NIPAL3-204ENST00000374399 ZNF135P52742 658 aaPredicted RBP16.2■□□□□ 0.18
NIPAL3-204ENST00000374399 MLLT6P55198 1093 aaPredicted RBP16.2■□□□□ 0.18
NIPAL3-204ENST00000374399 NRG1Q02297 640 aaPredicted RBP16.2■□□□□ 0.18
NIPAL3-204ENST00000374399 GPS1Q13098 491 aa16.2■□□□□ 0.18
NIPAL3-204ENST00000374399 PLD1Q13393 1074 aa16.2■□□□□ 0.18
NIPAL3-204ENST00000374399 HIBCHQ6NVY1 386 aaPredicted RBP16.2■□□□□ 0.18
NIPAL3-204ENST00000374399 MIB1Q86YT6 1006 aa16.2■□□□□ 0.18
NIPAL3-204ENST00000374399 POF1BQ8WVV4 589 aa16.2■□□□□ 0.18
NIPAL3-204ENST00000374399 PSMG2Q969U7 264 aa16.2■□□□□ 0.18
NIPAL3-204ENST00000374399 QKIQ96PU8 341 aaKnown RBP eCLIP16.2■□□□□ 0.182e-11■■■■■ 42
NIPAL3-204ENST00000374399 EPAS1Q99814 870 aa16.2■□□□□ 0.18
NIPAL3-204ENST00000374399 NR2E3Q9Y5X4 410 aa16.2■□□□□ 0.18
NIPAL3-204ENST00000374399 TRANK1O15050 2925 aa16.2■□□□□ 0.18
NIPAL3-204ENST00000374399 ATG2AQ2TAZ0 1938 aa16.2■□□□□ 0.18
NIPAL3-204ENST00000374399 NRG2O14511 850 aaPredicted RBP16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 DNALI1O14645 258 aaPredicted RBP16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 PPFIA2O75334 1257 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 MOCS2O96007 188 aaPredicted RBP16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 VAV1P15498 845 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 STIP1P31948 543 aaKnown RBP16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 ELF1P32519 619 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 IRS1P35568 1242 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 CHKAP35790 457 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 SLC45A4Q5BKX6 768 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 UBAP2Q5T6F2 1119 aaKnown RBP16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 IZUMO3Q5VZ72 239 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 PDZD8Q8NEN9 1154 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 RSAD2Q8WXG1 361 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 ZBTB9Q96C00 473 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 ABHD8Q96I13 439 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 C1orf74Q96LT6 269 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 ZNF512Q96ME7 567 aaPredicted RBP16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 PWWP2AQ96N64 755 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 1608.9 ms