RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 MKL1Q969V6 931 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 C18orf25Q96B23 403 aaPredicted RBP11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 DTNBP1Q96EV8 351 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 MAGEB10Q96LZ2 347 aaPredicted RBP11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 ADAM2Q99965 735 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 C15orf38-AP3S2A0A0A6YYH1 394 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 RNF103O00237 685 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 ZBTB39O15060 712 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 FKTNO75072 461 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 CATP04040 527 aaKnown RBP11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 FYNP06241 537 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 ACADSP16219 412 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 ITGB6P18564 788 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 CXCR2P25025 360 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 SP3Q02447 781 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 KRR1Q13601 381 aaKnown RBP11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 CSHL1Q14406 222 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 ITIH4Q14624 930 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 CCDC157Q569K6 752 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 PAPD7Q5XG87 772 aaKnown RBP11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 ARPINQ7Z6K5 226 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 B3GALNT2Q8NCR0 500 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 OR2W6PQ8NHA6 318 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 AHCYL2Q96HN2 611 aaKnown RBP11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 SERAC1Q96JX3 654 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 CNBD2Q96M20 576 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 USE1Q9NZ43 259 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 PHTF1Q9UMS5 762 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 ADM5C9JUS6 153 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 PIK3CDO00329 1044 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 TBC1D12O60347 775 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 SLITRK3O94933 977 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 UQCRBP14927 111 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 PLOD1Q02809 727 aaPredicted RBP11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 NR6A1Q15406 480 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 APLFQ8IW19 511 aaPredicted RBP11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 DPY30Q9C005 99 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 TNFSF13BQ9Y275 285 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 TNPO3Q9Y5L0 923 aaKnown RBP11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 MST1RQ04912 1400 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 ZSCAN5CA6NGD5 496 aaPredicted RBP11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 E7ENQ6 273 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 ENDOD1O94919 500 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 FGF19O95750 216 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 ADH1AP07327 375 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 TCN1P20061 433 aaPredicted RBP11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 RFX3P48380 749 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 CDK7P50613 346 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 CDKAL1Q5VV42 579 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 FBXO39Q8N4B4 442 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 TERB1Q8NA31 727 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 ATL1Q8WXF7 558 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 CPNE1Q99829 537 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 CCT7Q99832 543 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 WDR18Q9BV38 432 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 AGXT2Q9BYV1 514 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 PORCNQ9H237 461 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 NDUFA13Q9P0J0 144 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 AP4S1Q9Y587 144 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 NCF1BA6NI72 391 aaPredicted RBP11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 NCF1CA8MVU1 366 aaPredicted RBP11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 ERBB2P04626 1255 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 NCF1P14598 390 aaPredicted RBP11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 RPS7P62081 194 aaKnown RBP11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 MRPS15P82914 257 aaKnown RBP11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 ACOX1Q15067 660 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 CCDC142Q17RM4 750 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 CELF3Q5SZQ8 465 aaKnown RBP11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 TTC33Q6PID6 262 aaPredicted RBP11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 DPP10Q8N608 796 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 OSBPL6Q9BZF3 934 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 YIPF3Q9GZM5 350 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 VWDEQ8N2E2 1590 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 LACTBL1A8MY62 500 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 UBDO15205 165 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 DGKIO75912 1065 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 RPL9P32969 192 aaKnown RBP11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 DNAJC3Q13217 504 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 MSLNQ13421 630 aaPredicted RBP11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 SLC39A12Q504Y0 691 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 APOBEC3HQ6NTF7 200 aaKnown RBP11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 FBXL19Q6PCT2 694 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 EMC1Q8N766 993 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 CHORDC1Q9UHD1 332 aaPredicted RBP11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 CDH9Q9ULB4 789 aa11.35□□□□□ -0.59
PHACTR4-202ENST00000373839 MICAL2O94851 1124 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 WEE1P30291 646 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 GRK4P32298 578 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 NOS2P35228 1153 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 MRPS6P82932 125 aaKnown RBP11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 SMARCB1Q12824 385 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 MAP2K5Q13163 448 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 GSTA3Q16772 222 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 DEFB115Q30KQ5 88 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 SETMARQ53H47 684 aaPredicted RBP11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 HECTD3Q5T447 861 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 SLC47A2Q86VL8 602 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 DEFB106AQ8N104 65 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 SLC2A14Q8TDB8 520 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 ATG4AQ8WYN0 398 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms