RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 ISXQ2M1V0 245 aa12.9□□□□□ -0.34
HDAC8-204ENST00000373560 FOXR1Q6PIV2 292 aa12.9□□□□□ -0.34
HDAC8-204ENST00000373560 ZC3H3Q8IXZ2 948 aaKnown RBP12.9□□□□□ -0.34
HDAC8-204ENST00000373560 NUP93Q8N1F7 819 aa12.9□□□□□ -0.34
HDAC8-204ENST00000373560 CSGALNACT2Q8N6G5 542 aa12.9□□□□□ -0.34
HDAC8-204ENST00000373560 MRPL45Q9BRJ2 306 aaKnown RBP12.9□□□□□ -0.34
HDAC8-204ENST00000373560 TIPINQ9BVW5 301 aa12.9□□□□□ -0.34
HDAC8-204ENST00000373560 B3GNT5Q9BYG0 378 aa12.9□□□□□ -0.34
HDAC8-204ENST00000373560 MTMR12Q9C0I1 747 aa12.9□□□□□ -0.34
HDAC8-204ENST00000373560 SLC25A18Q9H1K4 315 aa12.9□□□□□ -0.34
HDAC8-204ENST00000373560 TMEM245Q9H330 911 aa12.9□□□□□ -0.34
HDAC8-204ENST00000373560 EHD2Q9NZN4 543 aa12.9□□□□□ -0.34
HDAC8-204ENST00000373560 TJP2Q9UDY2 1190 aa12.9□□□□□ -0.34
HDAC8-204ENST00000373560 NUDT5Q9UKK9 219 aa12.9□□□□□ -0.34
HDAC8-204ENST00000373560 AGO2Q9UKV8 859 aaKnown RBP12.9□□□□□ -0.34
HDAC8-204ENST00000373560 ENTPD2Q9Y5L3 495 aa12.9□□□□□ -0.34
HDAC8-204ENST00000373560 CRYBG3Q68DQ2 2970 aa12.9□□□□□ -0.35
HDAC8-204ENST00000373560 FFAR2O15552 330 aa12.89□□□□□ -0.35
HDAC8-204ENST00000373560 CYP26A1O43174 497 aa12.89□□□□□ -0.35
HDAC8-204ENST00000373560 JAK2O60674 1132 aa12.89□□□□□ -0.35
HDAC8-204ENST00000373560 RTN2O75298 545 aa12.89□□□□□ -0.35
HDAC8-204ENST00000373560 PSMA5P28066 241 aa12.89□□□□□ -0.35
HDAC8-204ENST00000373560 RBMS1P29558 406 aaKnown RBP12.89□□□□□ -0.35
HDAC8-204ENST00000373560 AFMP43652 599 aa12.89□□□□□ -0.35
HDAC8-204ENST00000373560 TUBP50607 506 aa12.89□□□□□ -0.35
HDAC8-204ENST00000373560 ZRSR1Q15695 479 aaKnown RBP12.89□□□□□ -0.35
HDAC8-204ENST00000373560 ANKS1BQ7Z6G8 1248 aa12.89□□□□□ -0.35
HDAC8-204ENST00000373560 CLEC14AQ86T13 490 aa12.89□□□□□ -0.35
HDAC8-204ENST00000373560 PDZD8Q8NEN9 1154 aa12.89□□□□□ -0.35
HDAC8-204ENST00000373560 ZNF564Q8TBZ8 553 aaPredicted RBP12.89□□□□□ -0.35
HDAC8-204ENST00000373560 OVCA2Q8WZ82 227 aa12.89□□□□□ -0.35
HDAC8-204ENST00000373560 REEP2Q9BRK0 252 aa12.89□□□□□ -0.35
HDAC8-204ENST00000373560 FUCA2Q9BTY2 467 aa12.89□□□□□ -0.35
HDAC8-204ENST00000373560 SGK2Q9HBY8 427 aa12.89□□□□□ -0.35
HDAC8-204ENST00000373560 PRSS16Q9NQE7 514 aa12.89□□□□□ -0.35
HDAC8-204ENST00000373560 CENPEQ02224 2701 aa12.89□□□□□ -0.35
HDAC8-204ENST00000373560 OTOGQ6ZRI0 2925 aa12.89□□□□□ -0.35
HDAC8-204ENST00000373560 TLR4O00206 839 aa12.88□□□□□ -0.35
HDAC8-204ENST00000373560 NPC1O15118 1278 aa12.88□□□□□ -0.35
HDAC8-204ENST00000373560 LZTS3O60299 673 aaPredicted RBP12.88□□□□□ -0.35
HDAC8-204ENST00000373560 PFKFB2O60825 505 aa12.88□□□□□ -0.35
HDAC8-204ENST00000373560 KLKB1P03952 638 aa12.88□□□□□ -0.35
HDAC8-204ENST00000373560 TGM2P21980 687 aa12.88□□□□□ -0.35
HDAC8-204ENST00000373560 WARSP23381 471 aaKnown RBP12.88□□□□□ -0.35
HDAC8-204ENST00000373560 COL8A1P27658 744 aa12.88□□□□□ -0.35
HDAC8-204ENST00000373560 PPP2CBP62714 309 aa12.88□□□□□ -0.35
HDAC8-204ENST00000373560 PPP2CAP67775 309 aa12.88□□□□□ -0.35
HDAC8-204ENST00000373560 ZNF211Q13398 564 aaPredicted RBP12.88□□□□□ -0.35
HDAC8-204ENST00000373560 SGO2Q562F6 1265 aa12.88□□□□□ -0.35
HDAC8-204ENST00000373560 NECAB1Q8N987 351 aa12.88□□□□□ -0.35
HDAC8-204ENST00000373560 SYT2Q8N9I0 419 aaPredicted RBP12.88□□□□□ -0.35
HDAC8-204ENST00000373560 UCMAQ8WVF2 138 aa12.88□□□□□ -0.35
HDAC8-204ENST00000373560 SAAL1Q96ER3 474 aa12.88□□□□□ -0.35
HDAC8-204ENST00000373560 NACA2Q9H009 215 aa12.88□□□□□ -0.35
HDAC8-204ENST00000373560 STYXL1Q9Y6J8 313 aa12.88□□□□□ -0.35
HDAC8-204ENST00000373560 SCN8AQ9UQD0 1980 aa12.87□□□□□ -0.35
HDAC8-204ENST00000373560 TNFSF15O95150 251 aa12.87□□□□□ -0.35
HDAC8-204ENST00000373560 IL18RAPO95256 599 aa12.87□□□□□ -0.35
HDAC8-204ENST00000373560 DNTTP04053 509 aa12.87□□□□□ -0.35
HDAC8-204ENST00000373560 DUSP3P51452 185 aaPredicted RBP12.87□□□□□ -0.35
HDAC8-204ENST00000373560 ASIC1P78348 528 aa12.87□□□□□ -0.35
HDAC8-204ENST00000373560 EHHADHQ08426 723 aa12.87□□□□□ -0.35
HDAC8-204ENST00000373560 FNDC3BQ53EP0 1204 aaKnown RBP12.87□□□□□ -0.35
HDAC8-204ENST00000373560 BMP2KLQ5H9B9 411 aa12.87□□□□□ -0.35
HDAC8-204ENST00000373560 TTC38Q5R3I4 469 aa12.87□□□□□ -0.35
HDAC8-204ENST00000373560 XKR5Q6UX68 686 aa12.87□□□□□ -0.35
HDAC8-204ENST00000373560 VASH2Q86V25 355 aa12.87□□□□□ -0.35
HDAC8-204ENST00000373560 BRSK2Q8IWQ3 736 aa12.87□□□□□ -0.35
HDAC8-204ENST00000373560 OR4C6Q8NH72 309 aa12.87□□□□□ -0.35
HDAC8-204ENST00000373560 CCDC97Q96F63 343 aaPredicted RBP12.87□□□□□ -0.35
HDAC8-204ENST00000373560 SERAC1Q96JX3 654 aa12.87□□□□□ -0.35
HDAC8-204ENST00000373560 FAM213AQ9BRX8 229 aa12.87□□□□□ -0.35
HDAC8-204ENST00000373560 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.87□□□□□ -0.35
HDAC8-204ENST00000373560 IL37Q9NZH6 218 aa12.87□□□□□ -0.35
HDAC8-204ENST00000373560 LARSQ9P2J5 1176 aaKnown RBP12.87□□□□□ -0.35
HDAC8-204ENST00000373560 ITGA11Q9UKX5 1188 aa12.87□□□□□ -0.35
HDAC8-204ENST00000373560 CA5BQ9Y2D0 317 aa12.87□□□□□ -0.35
HDAC8-204ENST00000373560 A0A1W2PP55 124 aa12.86□□□□□ -0.35
HDAC8-204ENST00000373560 A1L4Q6 167 aa12.86□□□□□ -0.35
HDAC8-204ENST00000373560 FAM92AA1XBS5 289 aa12.86□□□□□ -0.35
HDAC8-204ENST00000373560 STC2O76061 302 aa12.86□□□□□ -0.35
HDAC8-204ENST00000373560 RTN3O95197 1032 aaPredicted RBP12.86□□□□□ -0.35
HDAC8-204ENST00000373560 PLA2G4BP0C869 781 aa12.86□□□□□ -0.35
HDAC8-204ENST00000373560 CKMT1AP12532 417 aa12.86□□□□□ -0.35
HDAC8-204ENST00000373560 CASRP41180 1078 aa12.86□□□□□ -0.35
HDAC8-204ENST00000373560 PDX1P52945 283 aa12.86□□□□□ -0.35
HDAC8-204ENST00000373560 MAPRE1Q15691 268 aaKnown RBP12.86□□□□□ -0.35
HDAC8-204ENST00000373560 CRTC1Q6UUV9 634 aa12.86□□□□□ -0.35
HDAC8-204ENST00000373560 PAQR9Q6ZVX9 377 aa12.86□□□□□ -0.35
HDAC8-204ENST00000373560 ZMIZ2Q8NF64 920 aa12.86□□□□□ -0.35
HDAC8-204ENST00000373560 OR5B17Q8NGF7 314 aa12.86□□□□□ -0.35
HDAC8-204ENST00000373560 ARRDC3Q96B67 414 aa12.86□□□□□ -0.35
HDAC8-204ENST00000373560 ELOVL4Q9GZR5 314 aa12.86□□□□□ -0.35
HDAC8-204ENST00000373560 NEUROG2Q9H2A3 272 aa12.86□□□□□ -0.35
HDAC8-204ENST00000373560 PABPC3Q9H361 631 aaKnown RBP12.86□□□□□ -0.35
HDAC8-204ENST00000373560 ERVMER34-1Q9H9K5 563 aa12.86□□□□□ -0.35
HDAC8-204ENST00000373560 NMUR1Q9HB89 426 aa12.86□□□□□ -0.35
HDAC8-204ENST00000373560 GEMIN8Q9NWZ8 242 aaKnown RBP12.86□□□□□ -0.35
HDAC8-204ENST00000373560 LSM7Q9UK45 103 aaKnown RBP12.86□□□□□ -0.35
HDAC8-204ENST00000373560 PCDHGA8Q9Y5G5 932 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms