RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 COLGALT1Q8NBJ5 622 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 APPL2Q8NEU8 664 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 KCNV2Q8TDN2 545 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 RNF139Q8WU17 664 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 LGMNQ99538 433 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 TINF2Q9BSI4 451 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 DNAI2Q9GZS0 605 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 EMCNQ9ULC0 261 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 NR2E3Q9Y5X4 410 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 CCDC195A0A1B0GUA6 201 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 SDR42E2A6NKP2 422 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 H3BRJ5 948 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 RNF103O00237 685 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 GYG2O15488 501 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 ALDOAP04075 364 aaKnown RBP12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 ESRRAP11474 423 aaPredicted RBP12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 ADIGQ0VDE8 80 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 WASHC5Q12768 1159 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 DPYSQ14117 519 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 PAFAH1B3Q15102 231 aaKnown RBP12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 PACS1Q6VY07 963 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 TREML1Q86YW5 311 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 TOP6BLQ8N6T0 577 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 B3GALNT2Q8NCR0 500 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 TMEM40Q8WWA1 233 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 KCTD13Q8WZ19 329 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 P2RY11Q96G91 374 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 TNIP3Q96KP6 325 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 SLC2A13Q96QE2 648 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 DUSP16Q9BY84 665 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 TRIM6Q9C030 488 aaPredicted RBP12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 C20orf27Q9GZN8 174 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 RNF19AQ9NV58 838 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 IGSF9Q9P2J2 1179 aa12.93□□□□□ -0.34
TSPAN6-201ENST00000373020 LIN7AO14910 233 aaPredicted RBP12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 GLRA3O75311 464 aa12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 TOP3BO95985 862 aaKnown RBP12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 CYP2C9P11712 490 aa12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 EPHX2P34913 555 aa12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 NOS2P35228 1153 aa12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 PITX1P78337 314 aaPredicted RBP12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 SNX17Q15036 470 aa12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 TAF11Q15544 211 aa12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 KHDC1Q4VXA5 237 aaKnown RBP12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 MBLAC2Q68D91 279 aa12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 CRLF3Q8IUI8 442 aa12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 UNC5BQ8IZJ1 945 aa12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 PDCD7Q8N8D1 485 aaKnown RBP12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 MIEF2Q96C03 454 aa12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 SLC10A4Q96EP9 437 aa12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 SIKE1Q9BRV8 207 aa12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 NAT9Q9BTE0 207 aa12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 APOL6Q9BWW8 343 aa12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 ZNF395Q9H8N7 513 aaPredicted RBP12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 PIN4Q9Y237 131 aaKnown RBP12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 MYO18AQ92614 2054 aaKnown RBP12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 DCLK1O15075 740 aa12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 STK10O94804 968 aaKnown RBP12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 PTDSS1P48651 473 aaKnown RBP12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 RAP1GDS1P52306 607 aa12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 HIC1Q14526 733 aa12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 PDK1Q15118 436 aa12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 TBCCQ15814 346 aa12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 DPP9Q86TI2 863 aa12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 TEX9Q8N6V9 391 aa12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 CDKL2Q92772 493 aa12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 NAF1Q96HR8 494 aaKnown RBP12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 RNF39Q9H2S5 420 aa12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 GOLGA2P5Q9HBQ8 144 aa12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 XPNPEP3Q9NQH7 507 aa12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 THAP1Q9NVV9 213 aa12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 ARMCX1Q9P291 453 aa12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 SLC17A6Q9P2U8 582 aa12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 COL4A4P53420 1690 aaPredicted RBP12.92□□□□□ -0.34
TSPAN6-201ENST00000373020 PLIN3O60664 434 aa12.91□□□□□ -0.34
TSPAN6-201ENST00000373020 MAGEC1O60732 1142 aa12.91□□□□□ -0.34
TSPAN6-201ENST00000373020 HUS1O60921 280 aa12.91□□□□□ -0.34
TSPAN6-201ENST00000373020 ZNF189O75820 626 aaPredicted RBP12.91□□□□□ -0.34
TSPAN6-201ENST00000373020 LUC7L3O95232 432 aaKnown RBP12.91□□□□□ -0.34
TSPAN6-201ENST00000373020 FGF3P11487 239 aaPredicted RBP12.91□□□□□ -0.34
TSPAN6-201ENST00000373020 NPR3P17342 541 aa12.91□□□□□ -0.34
TSPAN6-201ENST00000373020 MGAT1P26572 445 aa12.91□□□□□ -0.34
TSPAN6-201ENST00000373020 PSMB4P28070 264 aa12.91□□□□□ -0.34
TSPAN6-201ENST00000373020 LRPAP1P30533 357 aa12.91□□□□□ -0.34
TSPAN6-201ENST00000373020 STX3Q13277 289 aa12.91□□□□□ -0.34
TSPAN6-201ENST00000373020 PDE1CQ14123 709 aaPredicted RBP12.91□□□□□ -0.34
TSPAN6-201ENST00000373020 ACSBG2Q5FVE4 666 aa12.91□□□□□ -0.34
TSPAN6-201ENST00000373020 PAQR9Q6ZVX9 377 aa12.91□□□□□ -0.34
TSPAN6-201ENST00000373020 ANKRD23Q86SG2 305 aa12.91□□□□□ -0.34
TSPAN6-201ENST00000373020 BRI3BPQ8WY22 251 aa12.91□□□□□ -0.34
TSPAN6-201ENST00000373020 ISL2Q96A47 359 aa12.91□□□□□ -0.34
TSPAN6-201ENST00000373020 MCUR1Q96AQ8 359 aa12.91□□□□□ -0.34
TSPAN6-201ENST00000373020 FAM149B1Q96BN6 582 aa12.91□□□□□ -0.34
TSPAN6-201ENST00000373020 CCDC106Q9BWC9 280 aa12.91□□□□□ -0.34
TSPAN6-201ENST00000373020 KLK14Q9P0G3 267 aa12.91□□□□□ -0.34
TSPAN6-201ENST00000373020 H0Y3Z8 333 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 TPP1O14773 563 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 PPP1R12AO14974 1030 aaPredicted RBP12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 PRKCGP05129 697 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 FAM163BP0C2L3 166 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms