RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 FAPQ12884 760 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 MMRN1Q13201 1228 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 IKBKEQ14164 716 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 SHROOM1Q2M3G4 852 aaPredicted RBP10.12□□□□□ -0.79
TRERF1-204ENST00000372922 TAF8Q7Z7C8 310 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 SYTL1Q8IYJ3 562 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 MAGEB18Q96M61 343 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 SMAD5Q99717 465 aaKnown RBP10.12□□□□□ -0.79
TRERF1-204ENST00000372922 GPRC5DQ9NZD1 345 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 PLAGL2Q9UPG8 496 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 MFN2O95140 757 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 POLR2EP19388 210 aaKnown RBP10.12□□□□□ -0.79
TRERF1-204ENST00000372922 HSD17B3P37058 310 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 ALDH9A1P49189 494 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 PSMC6P62333 389 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 ADIGQ0VDE8 80 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 DNAJC3Q13217 504 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 IQSEC1Q6DN90 963 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 NIPA1Q7RTP0 329 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 SLC47A2Q86VL8 602 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 MIER2Q8N344 545 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 CAMKK1Q8N5S9 505 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 PABPC3Q9H361 631 aaKnown RBP10.12□□□□□ -0.79
TRERF1-204ENST00000372922 TDRKHQ9Y2W6 561 aaKnown RBP10.12□□□□□ -0.79
TRERF1-204ENST00000372922 SNX8Q9Y5X2 465 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 CNPP09543 421 aaKnown RBP10.12□□□□□ -0.79
TRERF1-204ENST00000372922 TUBP50607 506 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 CSHL1Q14406 222 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 USP50Q70EL3 339 aaPredicted RBP10.12□□□□□ -0.79
TRERF1-204ENST00000372922 GPC2Q8N158 579 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 DNAJC9Q8WXX5 260 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 VPS33AQ96AX1 596 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 FAM136AQ96C01 138 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 NMD3Q96D46 503 aaKnown RBP10.12□□□□□ -0.79
TRERF1-204ENST00000372922 PDLIM2Q96JY6 352 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 ACOX2Q99424 681 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 PHACTR1Q9C0D0 580 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 ASB7Q9H672 318 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 PHTF1Q9UMS5 762 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 CABYRO75952 493 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 DDNO94850 711 aaPredicted RBP10.12□□□□□ -0.79
TRERF1-204ENST00000372922 ZNF23P17027 643 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 AKAP5P24588 427 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 NDST1P52848 882 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 CREMQ03060 361 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 ACVR2BQ13705 512 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 C11orf88Q6PI97 169 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 TMEM110Q86TL2 294 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 CLYBLQ8N0X4 340 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 ATG4AQ8WYN0 398 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 KCNB2Q92953 911 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 APOL2Q9BQE5 337 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 NR5A2O00482 541 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 CCNT2O60583 730 aaKnown RBP10.12□□□□□ -0.79
TRERF1-204ENST00000372922 ATP5BP06576 529 aaKnown RBP10.12□□□□□ -0.79
TRERF1-204ENST00000372922 DENND6AQ8IWF6 608 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 TDRD5Q8NAT2 981 aaKnown RBP10.12□□□□□ -0.79
TRERF1-204ENST00000372922 EDEM1Q92611 657 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 PRKD2Q9BZL6 878 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 TSPAN16Q9UKR8 245 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 TRHDEQ9UKU6 1024 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 UMODL1Q5DID0 1318 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 NFICP08651 508 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 CLTBP09497 229 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 HNRNPH1P31943 449 aaKnown RBP10.12□□□□□ -0.79
TRERF1-204ENST00000372922 MGAT5Q09328 741 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 CCNG2Q16589 344 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 MAGEC3Q8TD91 643 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 TAS1R2Q8TE23 839 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 PPP1R16AQ96I34 528 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 QKIQ96PU8 341 aaKnown RBP eCLIP10.12□□□□□ -0.79
TRERF1-204ENST00000372922 NDOR1Q9UHB4 597 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 KLF15Q9UIH9 416 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 DAPK2Q9UIK4 370 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 WBP11Q9Y2W2 641 aaKnown RBP10.12□□□□□ -0.79
TRERF1-204ENST00000372922 TIMM13Q9Y5L4 95 aaPredicted RBP10.12□□□□□ -0.79
TRERF1-204ENST00000372922 ERCC6L2Q5T890 1561 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 A0A088AWK7 358 aa10.11□□□□□ -0.79
TRERF1-204ENST00000372922 DDTLA6NHG4 134 aaPredicted RBP10.11□□□□□ -0.79
TRERF1-204ENST00000372922 F8VZ95 297 aa10.11□□□□□ -0.79
TRERF1-204ENST00000372922 ZNF682O95780 498 aa10.11□□□□□ -0.79
TRERF1-204ENST00000372922 ZNF10P21506 573 aaPredicted RBP10.11□□□□□ -0.79
TRERF1-204ENST00000372922 NUP62P37198 522 aaPredicted RBP10.11□□□□□ -0.79
TRERF1-204ENST00000372922 CPA2P48052 419 aa10.11□□□□□ -0.79
TRERF1-204ENST00000372922 CDH17Q12864 832 aa10.11□□□□□ -0.79
TRERF1-204ENST00000372922 PABPC1LQ4VXU2 614 aaKnown RBP10.11□□□□□ -0.79
TRERF1-204ENST00000372922 GRTP1Q5TC63 336 aa10.11□□□□□ -0.79
TRERF1-204ENST00000372922 CES5AQ6NT32 575 aa10.11□□□□□ -0.79
TRERF1-204ENST00000372922 SLC26A11Q86WA9 606 aa10.11□□□□□ -0.79
TRERF1-204ENST00000372922 ABRAQ8N0Z2 381 aa10.11□□□□□ -0.79
TRERF1-204ENST00000372922 MAGED4Q96JG8 741 aa10.11□□□□□ -0.79
TRERF1-204ENST00000372922 CHMP1AQ9HD42 196 aaPredicted RBP10.11□□□□□ -0.79
TRERF1-204ENST00000372922 A0A087X0T9 212 aa10.11□□□□□ -0.79
TRERF1-204ENST00000372922 CCDC189A1A4V9 331 aa10.11□□□□□ -0.79
TRERF1-204ENST00000372922 TM9SF1O15321 606 aa10.11□□□□□ -0.79
TRERF1-204ENST00000372922 MICAL2O94851 1124 aa10.11□□□□□ -0.79
TRERF1-204ENST00000372922 FAM228BP0C875 321 aa10.11□□□□□ -0.79
TRERF1-204ENST00000372922 RRM1P23921 792 aa10.11□□□□□ -0.79
TRERF1-204ENST00000372922 PPATQ06203 517 aa10.11□□□□□ -0.79
TRERF1-204ENST00000372922 BCL2L1Q07817 233 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms