RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 FAM163AQ96GL9 167 aaPredicted RBP14.4□□□□□ -0.1
RAPGEF1-202ENST00000372190 TMEM8AQ9HCN3 771 aa14.4□□□□□ -0.1
RAPGEF1-202ENST00000372190 ARSEP51690 589 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 EPHB3P54753 998 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 RPL19P84098 196 aaKnown RBP14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 EFL1Q7Z2Z2 1120 aaKnown RBP14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 RIOX2Q8IUF8 465 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 PEX5LQ8IYB4 626 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 ITFG2Q969R8 447 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 HAO1Q9UJM8 370 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 TMEM120BA0PK00 339 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 EPN2O95208 641 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 ANKRD26P1Q6NSI1 321 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 HMBOX1Q6NT76 420 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 ESRP1Q6NXG1 681 aaKnown RBP14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 ROGDIQ9GZN7 287 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 WDR35Q9P2L0 1181 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 A0A087WZ62 844 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 ADGRB2O60241 1585 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 RTN2O75298 545 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 ATP6V1G1O75348 118 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 SLC18A3Q16572 532 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 AMHR2Q16671 573 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 SWI5Q1ZZU3 235 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 EFHC1Q5JVL4 640 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 PRMT9Q6P2P2 845 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 HASPINQ8TF76 798 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 FDXACB1Q9BRP7 624 aaPredicted RBP14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 EMILIN2Q9BXX0 1053 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 PHF11Q9UIL8 331 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 ZNF541Q9H0D2 1346 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 WEE2P0C1S8 567 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 SLC1A1P43005 524 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 TSNQ15631 228 aaKnown RBP14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 SCARA3Q6AZY7 606 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 DENND5AQ6IQ26 1287 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 NECAB2Q7Z6G3 386 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 ATL2Q8NHH9 583 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 SLC7A14Q8TBB6 771 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 DCUN1D1Q96GG9 259 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 APBA2Q99767 749 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 IGFLR1Q9H665 355 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 LOC100653049A0A140TA62 436 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 TRPC5OSA6NMA1 111 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 STX11O75558 287 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 KRT34O76011 436 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 MYL2P10916 166 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 MUTP22033 750 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 IKBKEQ14164 716 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 P3H1Q32P28 736 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 SPDYAQ5MJ70 313 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 GPR142Q7Z601 462 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 RAB42Q8N4Z0 105 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 TC2NQ8N9U0 490 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 CAMKK2Q96RR4 588 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 NIF3L1Q9GZT8 377 aa14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 GPN3Q9UHW5 284 aaPredicted RBP14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 COL3A1P02461 1466 aaPredicted RBP14.39□□□□□ -0.11
RAPGEF1-202ENST00000372190 MBL2P11226 248 aaPredicted RBP14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 RPS7P62081 194 aaKnown RBP14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 OLFML2AQ68BL7 652 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 EZH1Q92800 747 aaPredicted RBP14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 RUSC1Q9BVN2 902 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 ABCB10Q9NRK6 738 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 OGTO15294 1046 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 MLNP12872 115 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 HOXC8P31273 242 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 SEZ6Q53EL9 994 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 CYP4Z2PQ8N1L4 340 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 GSDMCQ9BYG8 508 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 IL1RL2Q9HB29 575 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 GPRC5CQ9NQ84 441 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 RGS18Q9NS28 235 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 RIC8BQ9NVN3 520 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 CYP39A1Q9NYL5 469 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 UBA6A0AVT1 1052 aaPredicted RBP14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 CYB561D2O14569 222 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 FARP2O94887 1054 aaPredicted RBP14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 KLRC2P26717 231 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 CNTN2Q02246 1040 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 MAP2K5Q13163 448 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 TAF5Q15542 800 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 LONRF1Q17RB8 773 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 DDI2Q5TDH0 399 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 SETD9Q8NE22 299 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 UPF1Q92900 1129 aaKnown RBP eCLIP14.38□□□□□ -0.113e-8■■■■■ 29.1
RAPGEF1-202ENST00000372190 BORCS5Q969J3 196 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 RBM12Q9NTZ6 932 aaKnown RBP14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 TMCC3Q9ULS5 477 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 IFNA16P05015 189 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 PDGFRAP16234 1089 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 SOX11P35716 441 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 ZNF280DQ6N043 979 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 ADSSL1Q8N142 457 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 CPA5Q8WXQ8 436 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 RIN2Q8WYP3 895 aaPredicted RBP14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 TMEM138Q9NPI0 162 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 TRIM10Q9UDY6 481 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 PTPN4P29074 926 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms