RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 SFMBT1Q9UHJ3 866 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 ZFP69BQ9UJL9 534 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 GGA2Q9UJY4 613 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 STAP1Q9ULZ2 295 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 I6L893 689 aaPredicted RBP12.11□□□□□ -0.47
PDE6C-201ENST00000371447 CHADO15335 359 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 CHRNA1P02708 482 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 SETSIPP0DME0 302 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 TROVE2P10155 538 aaKnown RBP eCLIP12.11□□□□□ -0.47
PDE6C-201ENST00000371447 NQO1P15559 274 aaKnown RBP12.11□□□□□ -0.47
PDE6C-201ENST00000371447 SESN3P58005 492 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 DPYSL2Q16555 572 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 ARHGAP17Q68EM7 881 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 ARID3BQ8IVW6 561 aaPredicted RBP12.11□□□□□ -0.47
PDE6C-201ENST00000371447 STAMBPL1Q96FJ0 436 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 RILPQ96NA2 401 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 ADAM2Q99965 735 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 ZNF358Q9NW07 568 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 ZMYND8Q9ULU4 1186 aaPredicted RBP12.11□□□□□ -0.47
PDE6C-201ENST00000371447 SLC12A4Q9UP95 1085 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 MDM4O15151 490 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 APOEP02649 317 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 GNAT1P11488 350 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 SERPINB3P29508 390 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 CDC25CP30307 473 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 PNPLA4P41247 253 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 MRPS6P82932 125 aaKnown RBP12.11□□□□□ -0.47
PDE6C-201ENST00000371447 LACTB2Q53H82 288 aaPredicted RBP12.11□□□□□ -0.47
PDE6C-201ENST00000371447 FAM35AQ86V20 835 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 B3GALT6Q96L58 329 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 TKTL2Q9H0I9 626 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 SENP1Q9P0U3 644 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 NUMBLQ9Y6R0 609 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 RPS6KL1Q9Y6S9 549 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 XPO1O14980 1071 aaKnown RBP12.1□□□□□ -0.47
PDE6C-201ENST00000371447 PRPF4O43172 522 aaKnown RBP eCLIP12.1□□□□□ -0.47
PDE6C-201ENST00000371447 ZWINTO95229 277 aa12.1□□□□□ -0.47
PDE6C-201ENST00000371447 JCHAINP01591 159 aa12.1□□□□□ -0.47
PDE6C-201ENST00000371447 SNRPAP09012 282 aaKnown RBP12.1□□□□□ -0.47
PDE6C-201ENST00000371447 SERPINB4P48594 390 aa12.1□□□□□ -0.47
PDE6C-201ENST00000371447 RPL10AP62906 217 aaKnown RBP12.1□□□□□ -0.47
PDE6C-201ENST00000371447 CMC1Q7Z7K0 106 aa12.1□□□□□ -0.47
PDE6C-201ENST00000371447 GSTCDQ8NEC7 633 aa12.1□□□□□ -0.47
PDE6C-201ENST00000371447 MYCBPQ99417 103 aaPredicted RBP12.1□□□□□ -0.47
PDE6C-201ENST00000371447 SYBUQ9NX95 663 aa12.1□□□□□ -0.47
PDE6C-201ENST00000371447 FZD10Q9ULW2 581 aa12.1□□□□□ -0.47
PDE6C-201ENST00000371447 PADI3Q9ULW8 664 aa12.1□□□□□ -0.47
PDE6C-201ENST00000371447 ACTL7BQ9Y614 415 aa12.1□□□□□ -0.47
PDE6C-201ENST00000371447 E7ESA3 106 aa12.1□□□□□ -0.47
PDE6C-201ENST00000371447 H3BRJ5 948 aa12.1□□□□□ -0.47
PDE6C-201ENST00000371447 STK10O94804 968 aaKnown RBP12.1□□□□□ -0.47
PDE6C-201ENST00000371447 OAS1P00973 400 aaKnown RBP12.1□□□□□ -0.47
PDE6C-201ENST00000371447 AKR1A1P14550 325 aa12.1□□□□□ -0.47
PDE6C-201ENST00000371447 ACADSBP45954 432 aa12.1□□□□□ -0.47
PDE6C-201ENST00000371447 TDRPQ86YL5 185 aa12.1□□□□□ -0.47
PDE6C-201ENST00000371447 NUDCD3Q8IVD9 361 aa12.1□□□□□ -0.47
PDE6C-201ENST00000371447 ZNF567Q8N184 647 aa12.1□□□□□ -0.47
PDE6C-201ENST00000371447 WDCPQ9H6R7 721 aa12.1□□□□□ -0.47
PDE6C-201ENST00000371447 PLAC1Q9HBJ0 212 aa12.1□□□□□ -0.47
PDE6C-201ENST00000371447 G3BP2Q9UN86 482 aaKnown RBP12.1□□□□□ -0.47
PDE6C-201ENST00000371447 USH1CQ9Y6N9 552 aa12.1□□□□□ -0.47
PDE6C-201ENST00000371447 ANK1P16157 1881 aa12.1□□□□□ -0.47
PDE6C-201ENST00000371447 BCLAF3A2AJT9 711 aaKnown RBP12.09□□□□□ -0.47
PDE6C-201ENST00000371447 MGEA5O60502 916 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 LYPLA1O75608 230 aaPredicted RBP12.09□□□□□ -0.47
PDE6C-201ENST00000371447 ATP6V1G2O95670 118 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 HMBSP08397 361 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 MYL2P10916 166 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 PTPN9P43378 593 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 BNIP1Q12981 228 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 TTC39BQ5VTQ0 682 aaPredicted RBP12.09□□□□□ -0.47
PDE6C-201ENST00000371447 AGMOQ6ZNB7 445 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 ALYREFQ86V81 257 aaKnown RBP12.09□□□□□ -0.47
PDE6C-201ENST00000371447 TEKT4Q8WW24 435 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 TRIB2Q92519 343 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 MYLPFQ96A32 169 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 ZNF669Q96BR6 464 aaPredicted RBP12.09□□□□□ -0.47
PDE6C-201ENST00000371447 HSFY1Q96LI6 401 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 EBNA1BP2Q99848 306 aaKnown RBP12.09□□□□□ -0.47
PDE6C-201ENST00000371447 FRMD8P1Q9BZ68 369 aaPredicted RBP12.09□□□□□ -0.47
PDE6C-201ENST00000371447 CAB39LQ9H9S4 337 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 TMLHEQ9NVH6 421 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 ABI2Q9NYB9 513 aaPredicted RBP12.09□□□□□ -0.47
PDE6C-201ENST00000371447 DERAQ9Y315 318 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 DPYSL4O14531 572 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 SOAT2O75908 522 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 ASGR1P07306 291 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 NOS2P35228 1153 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 PGFP49763 221 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 ARFIP2P53365 341 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 XRCC4Q13426 336 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 ACCSLQ4AC99 568 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 CERCAMQ5T4B2 595 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 ZNF534Q76KX8 674 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 TNS4Q8IZW8 715 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 NPWQ8N729 165 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 ZMIZ2Q8NF64 920 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 SIGLEC10Q96LC7 697 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 HNRNPABQ99729 332 aaKnown RBP12.09□□□□□ -0.47
PDE6C-201ENST00000371447 TRIM55Q9BYV6 548 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms