RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 EIF2B3Q9NR50 452 aaKnown RBP29.81■■■□□ 2.36
SSBP3-204ENST00000371320 NRP1O14786 923 aa29.81■■■□□ 2.36
SSBP3-204ENST00000371320 PPP1R12AO14974 1030 aaPredicted RBP29.81■■■□□ 2.36
SSBP3-204ENST00000371320 FBXO21O94952 628 aa29.81■■■□□ 2.36
SSBP3-204ENST00000371320 CBX6O95503 412 aa29.81■■■□□ 2.36
SSBP3-204ENST00000371320 EZRP15311 586 aaKnown RBP29.81■■■□□ 2.36
SSBP3-204ENST00000371320 MLH1P40692 756 aa29.81■■■□□ 2.36
SSBP3-204ENST00000371320 RGS2P41220 211 aa29.81■■■□□ 2.36
SSBP3-204ENST00000371320 MRPS6P82932 125 aaKnown RBP29.81■■■□□ 2.36
SSBP3-204ENST00000371320 STEAP4Q687X5 459 aa29.81■■■□□ 2.36
SSBP3-204ENST00000371320 RFX8Q6ZV50 586 aa29.81■■■□□ 2.36
SSBP3-204ENST00000371320 CLNKQ7Z7G1 428 aa29.81■■■□□ 2.36
SSBP3-204ENST00000371320 SLC7A14Q8TBB6 771 aa29.81■■■□□ 2.36
SSBP3-204ENST00000371320 SYT15Q9BQS2 421 aa29.81■■■□□ 2.36
SSBP3-204ENST00000371320 CEP41Q9BYV8 373 aa29.81■■■□□ 2.36
SSBP3-204ENST00000371320 PRDM12Q9H4Q4 367 aa29.81■■■□□ 2.36
SSBP3-204ENST00000371320 IL1BP01584 269 aa29.8■■■□□ 2.36
SSBP3-204ENST00000371320 DPYSQ14117 519 aa29.8■■■□□ 2.36
SSBP3-204ENST00000371320 PAFAH1B3Q15102 231 aaKnown RBP29.8■■■□□ 2.36
SSBP3-204ENST00000371320 TRIM42Q8IWZ5 723 aa29.8■■■□□ 2.36
SSBP3-204ENST00000371320 ARMC2Q8NEN0 867 aa29.8■■■□□ 2.36
SSBP3-204ENST00000371320 UTP4Q969X6 686 aaKnown RBP29.8■■■□□ 2.36
SSBP3-204ENST00000371320 CDY2AQ9Y6F7 541 aa29.8■■■□□ 2.36
SSBP3-204ENST00000371320 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP29.8■■■□□ 2.36
SSBP3-204ENST00000371320 HMX2A2RU54 273 aa29.8■■■□□ 2.36
SSBP3-204ENST00000371320 AP1G2O75843 785 aa29.8■■■□□ 2.36
SSBP3-204ENST00000371320 LHX1P48742 406 aa29.8■■■□□ 2.36
SSBP3-204ENST00000371320 RABGGTBP53611 331 aa29.8■■■□□ 2.36
SSBP3-204ENST00000371320 SESN2P58004 480 aaPredicted RBP29.8■■■□□ 2.36
SSBP3-204ENST00000371320 NDUFAF2Q8N183 169 aa29.8■■■□□ 2.36
SSBP3-204ENST00000371320 AGAP11Q8TF27 550 aa29.8■■■□□ 2.36
SSBP3-204ENST00000371320 GAD1Q99259 594 aa29.8■■■□□ 2.36
SSBP3-204ENST00000371320 SAR1AQ9NR31 198 aa29.8■■■□□ 2.36
SSBP3-204ENST00000371320 PCMTD2Q9NV79 361 aa29.8■■■□□ 2.36
SSBP3-204ENST00000371320 HEY2Q9UBP5 337 aa29.8■■■□□ 2.36
SSBP3-204ENST00000371320 ST3GAL5Q9UNP4 418 aa29.8■■■□□ 2.36
SSBP3-204ENST00000371320 MTO1Q9Y2Z2 717 aaKnown RBP29.8■■■□□ 2.36
SSBP3-204ENST00000371320 FYNP06241 537 aa29.79■■■□□ 2.36
SSBP3-204ENST00000371320 ADRA1BP35368 520 aa29.79■■■□□ 2.36
SSBP3-204ENST00000371320 CRADDP78560 199 aa29.79■■■□□ 2.36
SSBP3-204ENST00000371320 TMEM86AQ8N2M4 240 aa29.79■■■□□ 2.36
SSBP3-204ENST00000371320 RNF169Q8NCN4 708 aa29.79■■■□□ 2.36
SSBP3-204ENST00000371320 GSTCDQ8NEC7 633 aa29.79■■■□□ 2.36
SSBP3-204ENST00000371320 SLC7A6OSQ96CW6 309 aaPredicted RBP29.79■■■□□ 2.36
SSBP3-204ENST00000371320 SLC9A7Q96T83 725 aa29.79■■■□□ 2.36
SSBP3-204ENST00000371320 FAM105AQ9NUU6 356 aa29.79■■■□□ 2.36
SSBP3-204ENST00000371320 TIMM13Q9Y5L4 95 aaPredicted RBP29.79■■■□□ 2.36
SSBP3-204ENST00000371320 ALDH1A2O94788 518 aa29.78■■■□□ 2.36
SSBP3-204ENST00000371320 THP07101 528 aa29.78■■■□□ 2.36
SSBP3-204ENST00000371320 PSMB4P28070 264 aa29.78■■■□□ 2.36
SSBP3-204ENST00000371320 DAOAP59103 153 aa29.78■■■□□ 2.36
SSBP3-204ENST00000371320 WASHC5Q12768 1159 aa29.78■■■□□ 2.36
SSBP3-204ENST00000371320 FAM35AQ86V20 835 aa29.78■■■□□ 2.36
SSBP3-204ENST00000371320 ADAM32Q8TC27 787 aa29.78■■■□□ 2.36
SSBP3-204ENST00000371320 SMOQ99835 787 aa29.78■■■□□ 2.36
SSBP3-204ENST00000371320 MECRQ9BV79 373 aa29.78■■■□□ 2.36
SSBP3-204ENST00000371320 TMEM120AQ9BXJ8 343 aa29.78■■■□□ 2.36
SSBP3-204ENST00000371320 KCNK13Q9HB14 408 aa29.78■■■□□ 2.36
SSBP3-204ENST00000371320 PIH1D1Q9NWS0 290 aaKnown RBP29.78■■■□□ 2.36
SSBP3-204ENST00000371320 NUMBLQ9Y6R0 609 aa29.78■■■□□ 2.36
SSBP3-204ENST00000371320 YJEFN3A6XGL0 299 aa29.78■■■□□ 2.36
SSBP3-204ENST00000371320 E7ENQ6 273 aa29.78■■■□□ 2.36
SSBP3-204ENST00000371320 I3L4J1 428 aa29.78■■■□□ 2.36
SSBP3-204ENST00000371320 DLDP09622 509 aaKnown RBP29.78■■■□□ 2.36
SSBP3-204ENST00000371320 CNTFP26441 200 aa29.78■■■□□ 2.36
SSBP3-204ENST00000371320 MGAT1P26572 445 aa29.78■■■□□ 2.36
SSBP3-204ENST00000371320 DSTYKQ6XUX3 929 aa29.78■■■□□ 2.36
SSBP3-204ENST00000371320 UNC5BQ8IZJ1 945 aa29.78■■■□□ 2.36
SSBP3-204ENST00000371320 ZNF567Q8N184 647 aa29.78■■■□□ 2.36
SSBP3-204ENST00000371320 APBA2Q99767 749 aa29.78■■■□□ 2.36
SSBP3-204ENST00000371320 EPB41L3Q9Y2J2 1087 aaPredicted RBP29.78■■■□□ 2.36
SSBP3-204ENST00000371320 TRPV2Q9Y5S1 764 aa29.78■■■□□ 2.36
SSBP3-204ENST00000371320 MYBPHLA2RUH7 354 aa29.77■■■□□ 2.36
SSBP3-204ENST00000371320 DCLK1O15075 740 aa29.77■■■□□ 2.36
SSBP3-204ENST00000371320 C6orf222P0C671 652 aaPredicted RBP29.77■■■□□ 2.36
SSBP3-204ENST00000371320 CRHR1P34998 444 aa29.77■■■□□ 2.36
SSBP3-204ENST00000371320 CLCNKBP51801 687 aa29.77■■■□□ 2.36
SSBP3-204ENST00000371320 AFF1P51825 1210 aaKnown RBP29.77■■■□□ 2.36
SSBP3-204ENST00000371320 AIF1P55008 147 aa29.77■■■□□ 2.36
SSBP3-204ENST00000371320 IFRD2Q12894 506 aaPredicted RBP29.77■■■□□ 2.36
SSBP3-204ENST00000371320 BSPRYQ5W0U4 402 aa29.77■■■□□ 2.36
SSBP3-204ENST00000371320 TIFABQ6ZNK6 161 aa29.77■■■□□ 2.36
SSBP3-204ENST00000371320 CCNJLQ8IV13 435 aa29.77■■■□□ 2.36
SSBP3-204ENST00000371320 PCED1BQ96HM7 432 aa29.77■■■□□ 2.36
SSBP3-204ENST00000371320 KCNK16Q96T55 309 aa29.77■■■□□ 2.36
SSBP3-204ENST00000371320 HUNKP57058 714 aa29.76■■■□□ 2.36
SSBP3-204ENST00000371320 CTC1Q2NKJ3 1217 aa29.76■■■□□ 2.36
SSBP3-204ENST00000371320 ATG16L1Q676U5 607 aa29.76■■■□□ 2.36
SSBP3-204ENST00000371320 PDZD4Q76G19 769 aaPredicted RBP29.76■■■□□ 2.36
SSBP3-204ENST00000371320 MARK2Q7KZI7 788 aaKnown RBP29.76■■■□□ 2.36
SSBP3-204ENST00000371320 CDKL2Q92772 493 aa29.76■■■□□ 2.36
SSBP3-204ENST00000371320 NTAN1Q96AB6 310 aa29.76■■■□□ 2.36
SSBP3-204ENST00000371320 CNGB3Q9NQW8 809 aa29.76■■■□□ 2.36
SSBP3-204ENST00000371320 MYADML2A6NDP7 307 aa29.76■■■□□ 2.35
SSBP3-204ENST00000371320 FAM72CH0Y354 149 aa29.76■■■□□ 2.35
SSBP3-204ENST00000371320 PGAM1P18669 254 aa29.76■■■□□ 2.35
SSBP3-204ENST00000371320 CCND1P24385 295 aa29.76■■■□□ 2.35
SSBP3-204ENST00000371320 TMPRSS15P98073 1019 aa29.76■■■□□ 2.35
SSBP3-204ENST00000371320 ZBTB16Q05516 673 aa29.76■■■□□ 2.35
SSBP3-204ENST00000371320 FAM72AQ5TYM5 149 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms