RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 DDX42Q86XP3 938 aaKnown RBP eCLIP15.59■□□□□ 0.09
LMO4-201ENST00000370542 ZMIZ2Q8NF64 920 aa15.59■□□□□ 0.09
LMO4-201ENST00000370542 USP33Q8TEY7 942 aa15.59■□□□□ 0.09
LMO4-201ENST00000370542 ACDQ96AP0 544 aa15.59■□□□□ 0.09
LMO4-201ENST00000370542 SMARCD1Q96GM5 515 aa15.59■□□□□ 0.09
LMO4-201ENST00000370542 OSBPL9Q96SU4 736 aa15.59■□□□□ 0.09
LMO4-201ENST00000370542 DMAP1Q9NPF5 467 aaPredicted RBP15.59■□□□□ 0.09
LMO4-201ENST00000370542 LHX6Q9UPM6 363 aa15.59■□□□□ 0.09
LMO4-201ENST00000370542 PCDHGA5Q9Y5G8 931 aa15.59■□□□□ 0.09
LMO4-201ENST00000370542 SMG1Q96Q15 3661 aaKnown RBP15.58■□□□□ 0.09
LMO4-201ENST00000370542 DMXL2Q8TDJ6 3036 aa15.58■□□□□ 0.09
LMO4-201ENST00000370542 SSU72P8A0A1W2PR75 194 aa15.58■□□□□ 0.08
LMO4-201ENST00000370542 E2F8A0AVK6 867 aa15.58■□□□□ 0.08
LMO4-201ENST00000370542 TMEM8BA6NDV4 472 aa15.58■□□□□ 0.08
LMO4-201ENST00000370542 RNF225M0QZC1 329 aaPredicted RBP15.58■□□□□ 0.08
LMO4-201ENST00000370542 AXIN1O15169 862 aa15.58■□□□□ 0.08
LMO4-201ENST00000370542 ABL1P00519 1130 aa15.58■□□□□ 0.08
LMO4-201ENST00000370542 ZNF806P0C7X5 589 aa15.58■□□□□ 0.08
LMO4-201ENST00000370542 LSP1P33241 339 aa15.58■□□□□ 0.08
LMO4-201ENST00000370542 ASPAP45381 313 aa15.58■□□□□ 0.08
LMO4-201ENST00000370542 PXNP49023 591 aaPredicted RBP15.58■□□□□ 0.08
LMO4-201ENST00000370542 SLC5A3P53794 718 aa15.58■□□□□ 0.08
LMO4-201ENST00000370542 INCA1Q0VD86 236 aa15.58■□□□□ 0.08
LMO4-201ENST00000370542 DMC1Q14565 340 aa15.58■□□□□ 0.08
LMO4-201ENST00000370542 WLSQ5T9L3 541 aa15.58■□□□□ 0.08
LMO4-201ENST00000370542 CCDC121Q6ZUS5 278 aa15.58■□□□□ 0.08
LMO4-201ENST00000370542 KBTBD6Q86V97 674 aa15.58■□□□□ 0.08
LMO4-201ENST00000370542 RASSF3Q86WH2 238 aa15.58■□□□□ 0.08
LMO4-201ENST00000370542 IQCKQ8N0W5 287 aa15.58■□□□□ 0.08
LMO4-201ENST00000370542 SCAMP5Q8TAC9 235 aa15.58■□□□□ 0.08
LMO4-201ENST00000370542 ZNF473Q8WTR7 871 aaKnown RBP15.58■□□□□ 0.08
LMO4-201ENST00000370542 OTUB2Q96DC9 234 aa15.58■□□□□ 0.08
LMO4-201ENST00000370542 ATP6V1G3Q96LB4 118 aa15.58■□□□□ 0.08
LMO4-201ENST00000370542 SMOQ99835 787 aa15.58■□□□□ 0.08
LMO4-201ENST00000370542 TUBGCP2Q9BSJ2 902 aa15.58■□□□□ 0.08
LMO4-201ENST00000370542 KLC4Q9NSK0 619 aa15.58■□□□□ 0.08
LMO4-201ENST00000370542 WASF3Q9UPY6 502 aa15.58■□□□□ 0.08
LMO4-201ENST00000370542 ATP8B3O60423 1300 aa15.58■□□□□ 0.08
LMO4-201ENST00000370542 MYOFQ9NZM1 2061 aa15.58■□□□□ 0.08
LMO4-201ENST00000370542 PDE2AO00408 941 aaPredicted RBP15.57■□□□□ 0.08
LMO4-201ENST00000370542 COCHO43405 550 aa15.57■□□□□ 0.08
LMO4-201ENST00000370542 SRGAP2O75044 1071 aa15.57■□□□□ 0.08
LMO4-201ENST00000370542 APBB3O95704 486 aa15.57■□□□□ 0.08
LMO4-201ENST00000370542 MYBL2P10244 700 aa15.57■□□□□ 0.08
LMO4-201ENST00000370542 P4HA1P13674 534 aa15.57■□□□□ 0.08
LMO4-201ENST00000370542 EZRP15311 586 aaKnown RBP15.57■□□□□ 0.08
LMO4-201ENST00000370542 NR1D1P20393 614 aa15.57■□□□□ 0.08
LMO4-201ENST00000370542 MDH1P40925 334 aaKnown RBP15.57■□□□□ 0.08
LMO4-201ENST00000370542 MRPS21P82921 87 aaKnown RBP15.57■□□□□ 0.08
LMO4-201ENST00000370542 C1QBPQ07021 282 aaKnown RBP15.57■□□□□ 0.08
LMO4-201ENST00000370542 SLMAPQ14BN4 828 aa15.57■□□□□ 0.08
LMO4-201ENST00000370542 PLK5Q496M5 336 aa15.57■□□□□ 0.08
LMO4-201ENST00000370542 CCDC40Q4G0X9 1142 aa15.57■□□□□ 0.08
LMO4-201ENST00000370542 HECTD3Q5T447 861 aa15.57■□□□□ 0.08
LMO4-201ENST00000370542 NAA35Q5VZE5 725 aa15.57■□□□□ 0.08
LMO4-201ENST00000370542 IRF2BP1Q8IU81 584 aa15.57■□□□□ 0.08
LMO4-201ENST00000370542 PHTF2Q8N3S3 785 aa15.57■□□□□ 0.08
LMO4-201ENST00000370542 GUF1Q8N442 669 aaKnown RBP15.57■□□□□ 0.08
LMO4-201ENST00000370542 FBXO32Q969P5 355 aa15.57■□□□□ 0.08
LMO4-201ENST00000370542 LRRC45Q96CN5 670 aa15.57■□□□□ 0.08
LMO4-201ENST00000370542 NOX5Q96PH1 765 aa15.57■□□□□ 0.08
LMO4-201ENST00000370542 HHIPQ96QV1 700 aa15.57■□□□□ 0.08
LMO4-201ENST00000370542 LRRC1Q9BTT6 524 aa15.57■□□□□ 0.08
LMO4-201ENST00000370542 DUSP15Q9H1R2 295 aaPredicted RBP15.57■□□□□ 0.08
LMO4-201ENST00000370542 TBC1D14Q9P2M4 693 aa15.57■□□□□ 0.08
LMO4-201ENST00000370542 TRIM10Q9UDY6 481 aa15.57■□□□□ 0.08
LMO4-201ENST00000370542 CHORDC1Q9UHD1 332 aaPredicted RBP15.57■□□□□ 0.08
LMO4-201ENST00000370542 MCM8Q9UJA3 840 aa15.57■□□□□ 0.08
LMO4-201ENST00000370542 PCDHA13Q9Y5I0 950 aa15.57■□□□□ 0.08
LMO4-201ENST00000370542 LOC400499M0QZD8 3231 aa15.56■□□□□ 0.08
LMO4-201ENST00000370542 CALUO43852 315 aaPredicted RBP15.56■□□□□ 0.08
LMO4-201ENST00000370542 GREM1O60565 184 aa15.56■□□□□ 0.08
LMO4-201ENST00000370542 BEST1O76090 585 aa15.56■□□□□ 0.08
LMO4-201ENST00000370542 HLA-DRAP01903 254 aa15.56■□□□□ 0.08
LMO4-201ENST00000370542 MBL2P11226 248 aaPredicted RBP15.56■□□□□ 0.08
LMO4-201ENST00000370542 NDST1P52848 882 aa15.56■□□□□ 0.08
LMO4-201ENST00000370542 MESP2Q0VG99 397 aa15.56■□□□□ 0.08
LMO4-201ENST00000370542 SNCBQ16143 134 aa15.56■□□□□ 0.08
LMO4-201ENST00000370542 HSF5Q4G112 596 aaPredicted RBP15.56■□□□□ 0.08
LMO4-201ENST00000370542 ZCWPW2Q504Y3 356 aa15.56■□□□□ 0.08
LMO4-201ENST00000370542 TTMPQ5BVD1 217 aa15.56■□□□□ 0.08
LMO4-201ENST00000370542 SPDYCQ5MJ68 293 aa15.56■□□□□ 0.08
LMO4-201ENST00000370542 AGBL2Q5U5Z8 902 aa15.56■□□□□ 0.08
LMO4-201ENST00000370542 FBXW10Q5XX13 1052 aa15.56■□□□□ 0.08
LMO4-201ENST00000370542 TTI2Q6NXR4 508 aa15.56■□□□□ 0.08
LMO4-201ENST00000370542 ACOT1Q86TX2 421 aa15.56■□□□□ 0.08
LMO4-201ENST00000370542 NLRP14Q86W24 1093 aa15.56■□□□□ 0.08
LMO4-201ENST00000370542 ETFBKMTQ8IXQ9 262 aa15.56■□□□□ 0.08
LMO4-201ENST00000370542 SMYD4Q8IYR2 804 aaPredicted RBP15.56■□□□□ 0.08
LMO4-201ENST00000370542 SYN2Q92777 582 aaPredicted RBP15.56■□□□□ 0.08
LMO4-201ENST00000370542 ELMO3Q96BJ8 720 aa15.56■□□□□ 0.08
LMO4-201ENST00000370542 FAXDC2Q96IV6 333 aa15.56■□□□□ 0.08
LMO4-201ENST00000370542 PCMTD1Q96MG8 357 aaPredicted RBP15.56■□□□□ 0.08
LMO4-201ENST00000370542 HNRNPABQ99729 332 aaKnown RBP15.56■□□□□ 0.08
LMO4-201ENST00000370542 ARRDC1-AS1Q9H2J1 176 aa15.56■□□□□ 0.08
LMO4-201ENST00000370542 SMPD4Q9NXE4 827 aa15.56■□□□□ 0.08
LMO4-201ENST00000370542 CFAP97Q9P2B7 532 aa15.56■□□□□ 0.08
LMO4-201ENST00000370542 MMP17Q9ULZ9 603 aa15.56■□□□□ 0.08
LMO4-201ENST00000370542 FRMD4BQ9Y2L6 1034 aa15.56■□□□□ 0.08
LMO4-201ENST00000370542 MYO18AQ92614 2054 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms