RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 NT5C1AQ9BXI3 368 aa16.09■□□□□ 0.17
SSR4-204ENST00000370087 BACH2Q9BYV9 841 aa16.09■□□□□ 0.17
SSR4-204ENST00000370087 ABCB8Q9NUT2 735 aa16.09■□□□□ 0.17
SSR4-204ENST00000370087 SPTLC2O15270 562 aa16.08■□□□□ 0.16
SSR4-204ENST00000370087 TIMM44O43615 452 aa16.08■□□□□ 0.16
SSR4-204ENST00000370087 BCAT1P54687 386 aa16.08■□□□□ 0.16
SSR4-204ENST00000370087 STK4Q13043 487 aa16.08■□□□□ 0.16
SSR4-204ENST00000370087 TRIP4Q15650 581 aaPredicted RBP16.08■□□□□ 0.16
SSR4-204ENST00000370087 ZNF394Q53GI3 561 aa16.08■□□□□ 0.16
SSR4-204ENST00000370087 HES3Q5TGS1 186 aa16.08■□□□□ 0.16
SSR4-204ENST00000370087 KIAA0895LQ68EN5 471 aa16.08■□□□□ 0.16
SSR4-204ENST00000370087 ADAT2Q7Z6V5 191 aaKnown RBP16.08■□□□□ 0.16
SSR4-204ENST00000370087 KIAA0907Q7Z7F0 614 aaPredicted RBP16.08■□□□□ 0.16
SSR4-204ENST00000370087 IQUBQ8NA54 791 aa16.08■□□□□ 0.16
SSR4-204ENST00000370087 TAS1R2Q8TE23 839 aa16.08■□□□□ 0.16
SSR4-204ENST00000370087 CNDP2Q96KP4 475 aaKnown RBP16.08■□□□□ 0.16
SSR4-204ENST00000370087 CDK5RAP1Q96SZ6 601 aaKnown RBP16.08■□□□□ 0.16
SSR4-204ENST00000370087 KCTD10Q9H3F6 313 aa16.08■□□□□ 0.16
SSR4-204ENST00000370087 PCDHGA1Q9Y5H4 931 aa16.08■□□□□ 0.16
SSR4-204ENST00000370087 TULP2O00295 520 aa16.07■□□□□ 0.16
SSR4-204ENST00000370087 VILLO15195 856 aa16.07■□□□□ 0.16
SSR4-204ENST00000370087 POLR2DO15514 142 aaKnown RBP16.07■□□□□ 0.16
SSR4-204ENST00000370087 KLRC4O43908 158 aa16.07■□□□□ 0.16
SSR4-204ENST00000370087 RFPL3O75679 317 aa16.07■□□□□ 0.16
SSR4-204ENST00000370087 DNTTP04053 509 aa16.07■□□□□ 0.16
SSR4-204ENST00000370087 TRIM49P0CI25 452 aa16.07■□□□□ 0.16
SSR4-204ENST00000370087 TRIM49CP0CI26 452 aa16.07■□□□□ 0.16
SSR4-204ENST00000370087 JUPP14923 745 aa16.07■□□□□ 0.16
SSR4-204ENST00000370087 AFMP43652 599 aa16.07■□□□□ 0.16
SSR4-204ENST00000370087 YWHAGP61981 247 aaKnown RBP eCLIP16.07■□□□□ 0.16
SSR4-204ENST00000370087 INAVAQ3KP66 663 aa16.07■□□□□ 0.16
SSR4-204ENST00000370087 RAB41Q5JT25 222 aa16.07■□□□□ 0.16
SSR4-204ENST00000370087 C6orf118Q5T5N4 469 aa16.07■□□□□ 0.16
SSR4-204ENST00000370087 FBXL19Q6PCT2 694 aa16.07■□□□□ 0.16
SSR4-204ENST00000370087 RSRC2Q7L4I2 434 aaKnown RBP16.07■□□□□ 0.16
SSR4-204ENST00000370087 SLC9A9Q8IVB4 645 aa16.07■□□□□ 0.16
SSR4-204ENST00000370087 FMNL3Q8IVF7 1028 aa16.07■□□□□ 0.16
SSR4-204ENST00000370087 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.07■□□□□ 0.16
SSR4-204ENST00000370087 ENGASEQ8NFI3 743 aa16.07■□□□□ 0.16
SSR4-204ENST00000370087 TMC2Q8TDI7 906 aa16.07■□□□□ 0.16
SSR4-204ENST00000370087 SAP25Q8TEE9 199 aa16.07■□□□□ 0.16
SSR4-204ENST00000370087 PLD4Q96BZ4 506 aa16.07■□□□□ 0.16
SSR4-204ENST00000370087 MYO19Q96H55 970 aa16.07■□□□□ 0.16
SSR4-204ENST00000370087 ELF4Q99607 663 aaPredicted RBP16.07■□□□□ 0.16
SSR4-204ENST00000370087 SGK2Q9HBY8 427 aa16.07■□□□□ 0.16
SSR4-204ENST00000370087 GGA2Q9UJY4 613 aa16.07■□□□□ 0.16
SSR4-204ENST00000370087 AK5Q9Y6K8 562 aa16.07■□□□□ 0.16
SSR4-204ENST00000370087 A0A1W2PPC4 97 aa16.06■□□□□ 0.16
SSR4-204ENST00000370087 FAM47DPA6NHR8 397 aa16.06■□□□□ 0.16
SSR4-204ENST00000370087 C10orf142B7Z368 130 aa16.06■□□□□ 0.16
SSR4-204ENST00000370087 PPP6R2O75170 966 aa16.06■□□□□ 0.16
SSR4-204ENST00000370087 LDOC1O95751 146 aaPredicted RBP16.06■□□□□ 0.16
SSR4-204ENST00000370087 NR3C1P04150 777 aa16.06■□□□□ 0.16
SSR4-204ENST00000370087 CD70P32970 193 aa16.06■□□□□ 0.16
SSR4-204ENST00000370087 C21orf59P57076 290 aa16.06■□□□□ 0.16
SSR4-204ENST00000370087 RACK1P63244 317 aaKnown RBP16.06■□□□□ 0.16
SSR4-204ENST00000370087 PPP3CAQ08209 521 aa16.06■□□□□ 0.16
SSR4-204ENST00000370087 KCNJ12Q14500 433 aa16.06■□□□□ 0.16
SSR4-204ENST00000370087 MPPE1Q53F39 396 aa16.06■□□□□ 0.16
SSR4-204ENST00000370087 MBLAC2Q68D91 279 aa16.06■□□□□ 0.16
SSR4-204ENST00000370087 PIGZQ86VD9 579 aa16.06■□□□□ 0.16
SSR4-204ENST00000370087 EID2Q8N6I1 236 aa16.06■□□□□ 0.16
SSR4-204ENST00000370087 GOLGA5Q8TBA6 731 aa16.06■□□□□ 0.16
SSR4-204ENST00000370087 WFIKKN2Q8TEU8 576 aa16.06■□□□□ 0.16
SSR4-204ENST00000370087 TSC1Q92574 1164 aa16.06■□□□□ 0.16
SSR4-204ENST00000370087 ACE2Q9BYF1 805 aaPredicted RBP16.06■□□□□ 0.16
SSR4-204ENST00000370087 NIF3L1Q9GZT8 377 aa16.06■□□□□ 0.16
SSR4-204ENST00000370087 PABPC3Q9H361 631 aaKnown RBP16.06■□□□□ 0.16
SSR4-204ENST00000370087 CYP3A43Q9HB55 503 aa16.06■□□□□ 0.16
SSR4-204ENST00000370087 FOXD4L1Q9NU39 408 aa16.06■□□□□ 0.16
SSR4-204ENST00000370087 STRIP2Q9ULQ0 834 aa16.06■□□□□ 0.16
SSR4-204ENST00000370087 KNTC1P50748 2209 aa16.05■□□□□ 0.16
SSR4-204ENST00000370087 PVALEFA0A1B0GWK0 134 aa16.05■□□□□ 0.16
SSR4-204ENST00000370087 MSI1O43347 362 aaKnown RBP16.05■□□□□ 0.16
SSR4-204ENST00000370087 BRINP1O60477 761 aa16.05■□□□□ 0.16
SSR4-204ENST00000370087 PABPC1P11940 636 aaKnown RBP16.05■□□□□ 0.16
SSR4-204ENST00000370087 HNF1BP35680 557 aa16.05■□□□□ 0.16
SSR4-204ENST00000370087 GCLMP48507 274 aa16.05■□□□□ 0.16
SSR4-204ENST00000370087 GALCP54803 685 aa16.05■□□□□ 0.16
SSR4-204ENST00000370087 ZBTB16Q05516 673 aa16.05■□□□□ 0.16
SSR4-204ENST00000370087 RTP5Q14D33 572 aa16.05■□□□□ 0.16
SSR4-204ENST00000370087 E2F5Q15329 346 aa16.05■□□□□ 0.16
SSR4-204ENST00000370087 TTC31Q49AM3 519 aaPredicted RBP16.05■□□□□ 0.16
SSR4-204ENST00000370087 CEP135Q66GS9 1140 aa16.05■□□□□ 0.16
SSR4-204ENST00000370087 ZNF776Q68DI1 518 aaPredicted RBP16.05■□□□□ 0.16
SSR4-204ENST00000370087 NCEH1Q6PIU2 408 aa16.05■□□□□ 0.16
SSR4-204ENST00000370087 LRRC69Q6ZNQ3 347 aa16.05■□□□□ 0.16
SSR4-204ENST00000370087 AHI1Q8N157 1196 aa16.05■□□□□ 0.16
SSR4-204ENST00000370087 SNIP1Q8TAD8 396 aaKnown RBP16.05■□□□□ 0.16
SSR4-204ENST00000370087 TMEM174Q8WUU8 243 aa16.05■□□□□ 0.16
SSR4-204ENST00000370087 ULBP1Q9BZM6 244 aa16.05■□□□□ 0.16
SSR4-204ENST00000370087 RSPH9Q9H1X1 276 aaPredicted RBP16.05■□□□□ 0.16
SSR4-204ENST00000370087 MAGEF1Q9HAY2 307 aa16.05■□□□□ 0.16
SSR4-204ENST00000370087 SFMBT1Q9UHJ3 866 aa16.05■□□□□ 0.16
SSR4-204ENST00000370087 PLA2G4CQ9UP65 541 aa16.05■□□□□ 0.16
SSR4-204ENST00000370087 A0A1W2PR77 199 aa16.04■□□□□ 0.16
SSR4-204ENST00000370087 CUTAO60888 179 aa16.04■□□□□ 0.16
SSR4-204ENST00000370087 ITGAVP06756 1048 aa16.04■□□□□ 0.16
SSR4-204ENST00000370087 DLDP09622 509 aaKnown RBP16.04■□□□□ 0.16
SSR4-204ENST00000370087 EPHA8P29322 1005 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms