RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 TRPC7Q9HCX4 862 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 OR12D3Q9UGF7 316 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 SH3BP1Q9Y3L3 701 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 SF3B1O75533 1304 aaKnown RBP eCLIP5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 DNAJC25-GNG10A0A024R161 153 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 UBA6A0AVT1 1052 aaPredicted RBP5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 TBKBP1A7MCY6 615 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 DPYSL4O14531 572 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 SNAI1O95863 264 aaPredicted RBP5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 PYGLP06737 847 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 GRK2P25098 689 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 GP5P40197 560 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 PTGIRP43119 386 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 CLDN10P78369 228 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 FSTL1Q12841 308 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 MAPRE2Q15555 327 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 TBCCQ15814 346 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 SH2D4BQ5SQS7 431 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 SCARA3Q6AZY7 606 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 MFSD5Q6N075 450 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 MRNIPQ6NTE8 343 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 LLGL2Q6P1M3 1020 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 C15orf39Q6ZRI6 1047 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 NLRP9Q7RTR0 991 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 KDELC2Q7Z4H8 507 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 KIF2BQ8N4N8 673 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 IRGQQ8WZA9 623 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 KAT2BQ92831 832 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 MYLPFQ96A32 169 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 ERP27Q96DN0 273 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 ELMO2Q96JJ3 720 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 CINPQ9BW66 212 aaPredicted RBP5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 KDM4CQ9H3R0 1056 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 MINDY3Q9H8M7 445 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 RBM22Q9NW64 420 aaKnown RBP eCLIP5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 SAE1Q9UBE0 346 aaPredicted RBP5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 SCOCQ9UIL1 159 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 GGA2Q9UJY4 613 aa5.46□□□□□ -1.53
SMNDC1-202ENST00000369603 MYH7BA7E2Y1 1941 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 TAF1LQ8IZX4 1826 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 OR6C75A6NL08 312 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 C2CD4BA6NLJ0 364 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 TXNDC9O14530 226 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 BNIP3LO60238 219 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 NDUFS3O75489 264 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 ASGR1P07306 291 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 PTPN7P35236 360 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 FLT3P36888 993 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 GPD2P43304 727 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 TUBP50607 506 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 OCRLQ01968 901 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 MPP3Q13368 585 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 CHI3L2Q15782 390 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 FAM83EQ2M2I3 478 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 DNAL1Q4LDG9 190 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 BRMS1LQ5PSV4 323 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 ANKRD20A2Q5SQ80 823 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 ANKRD20A1Q5TYW2 823 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 MARC1Q5VT66 337 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 DAB2IPQ5VWQ8 1189 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 TAPT1Q6NXT6 567 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 RFX8Q6ZV50 586 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 SLC24A5Q71RS6 500 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 ITIH5Q86UX2 942 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 FUKQ8N0W3 1084 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 MRPS31Q92665 395 aaKnown RBP5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 EXT2Q93063 718 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 ZBTB10Q96DT7 871 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 CCDC126Q96EE4 140 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 APOPT1Q96IL0 206 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 SH3GL3Q99963 347 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 ACSS3Q9H6R3 686 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 VRTNQ9H8Y1 702 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 STOML1Q9UBI4 398 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 SUN2Q9UH99 717 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 SLC39A10Q9ULF5 831 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 PADI3Q9ULW8 664 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 FIS1Q9Y3D6 152 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 CLUHO75153 1309 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 SH3BP5O60239 455 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 RAMP2O60895 175 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 FKTNO75072 461 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 PARNO95453 639 aaKnown RBP5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 LRG1P02750 347 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 SHBGP04278 402 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 PAX7P23759 505 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 HTR7P34969 479 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 EPHB3P54753 998 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 TPD52P55327 224 aaPredicted RBP5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 PRMT2P55345 433 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 PDAP1Q13442 181 aaKnown RBP5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 C1orf220Q5T0J3 134 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 GRTP1Q5TC63 336 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 NAIF1Q69YI7 327 aaPredicted RBP5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 PMF1Q6P1K2 205 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 TTC27Q6P3X3 843 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 SPATA24Q86W54 205 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 SLC25A41Q8N5S1 370 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 PDZD8Q8NEN9 1154 aa5.46□□□□□ -1.54
SMNDC1-202ENST00000369603 NPLOC4Q8TAT6 608 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms