RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 DAAM2Q86T65 1068 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 DNAAF5Q86Y56 855 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 OR2W6PQ8NHA6 318 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 ARHGEF26Q96DR7 871 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 OSBPL9Q96SU4 736 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 TLR10Q9BXR5 811 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 DNAI2Q9GZS0 605 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 SMYD3Q9H7B4 428 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 ATP13A2Q9NQ11 1180 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 CTTNBP2NLQ9P2B4 639 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 RNF14Q9UBS8 474 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 TUBGCP4Q9UGJ1 667 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 PUF60Q9UHX1 559 aaKnown RBP9.19□□□□□ -0.94
TPM3-213ENST00000368545 PADI3Q9ULW8 664 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 BARX2Q9UMQ3 279 aaPredicted RBP9.19□□□□□ -0.94
TPM3-213ENST00000368545 GIT1Q9Y2X7 761 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 SPEF1Q9Y4P9 236 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 MKI67P46013 3256 aaKnown RBP9.19□□□□□ -0.94
TPM3-213ENST00000368545 C5orf67F2Z3F1 127 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 H0Y858 1186 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 FOXD2O60548 495 aaPredicted RBP9.19□□□□□ -0.94
TPM3-213ENST00000368545 TADA3O75528 432 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 PRKD3O94806 890 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 GHRP10912 638 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 CKBP12277 381 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 LRPAP1P30533 357 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 CD52P31358 61 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 CDH5P33151 784 aaPredicted RBP9.19□□□□□ -0.94
TPM3-213ENST00000368545 FLT3P36888 993 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 VCPP55072 806 aaKnown RBP9.19□□□□□ -0.94
TPM3-213ENST00000368545 HTRA4P83105 476 aaPredicted RBP9.19□□□□□ -0.94
TPM3-213ENST00000368545 LPIN1Q14693 890 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 LIN9Q5TKA1 542 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 FOXR1Q6PIV2 292 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 PEX26Q7Z412 305 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 PHF13Q86YI8 300 aaPredicted RBP9.19□□□□□ -0.94
TPM3-213ENST00000368545 MCOLN2Q8IZK6 566 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 GOLGA1Q92805 767 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 TMEM176AQ96HP8 235 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 MMS19Q96T76 1030 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 C11orf84Q9BUA3 381 aaPredicted RBP9.19□□□□□ -0.94
TPM3-213ENST00000368545 AGO3Q9H9G7 860 aaKnown RBP9.19□□□□□ -0.94
TPM3-213ENST00000368545 UBN1Q9NPG3 1134 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 TLR9Q9NR96 1032 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 OBP2AQ9NY56 170 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 KIAA1257Q9ULG3 409 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 CTAGE15A4D2H0 777 aa9.18□□□□□ -0.94
TPM3-213ENST00000368545 ZNF891A8MT65 544 aaPredicted RBP9.18□□□□□ -0.94
TPM3-213ENST00000368545 PIRO00625 290 aa9.18□□□□□ -0.94
TPM3-213ENST00000368545 ZNF623O75123 536 aa9.18□□□□□ -0.94
TPM3-213ENST00000368545 FTCDO95954 541 aa9.18□□□□□ -0.94
TPM3-213ENST00000368545 CTAGE8P0CG41 777 aa9.18□□□□□ -0.94
TPM3-213ENST00000368545 RAP1GAPP47736 663 aa9.18□□□□□ -0.94
TPM3-213ENST00000368545 SCNN1BP51168 640 aa9.18□□□□□ -0.94
TPM3-213ENST00000368545 RAD23BP54727 409 aa9.18□□□□□ -0.94
TPM3-213ENST00000368545 STILQ15468 1287 aa9.18□□□□□ -0.94
TPM3-213ENST00000368545 ANKRD39Q53RE8 183 aa9.18□□□□□ -0.94
TPM3-213ENST00000368545 ZNF618Q5T7W0 954 aa9.18□□□□□ -0.94
TPM3-213ENST00000368545 NAA35Q5VZE5 725 aa9.18□□□□□ -0.94
TPM3-213ENST00000368545 UBE2R2Q712K3 238 aaPredicted RBP9.18□□□□□ -0.94
TPM3-213ENST00000368545 MON1BQ7L1V2 547 aa9.18□□□□□ -0.94
TPM3-213ENST00000368545 ZNF572Q7Z3I7 529 aaPredicted RBP9.18□□□□□ -0.94
TPM3-213ENST00000368545 UBE3DQ7Z6J8 389 aa9.18□□□□□ -0.94
TPM3-213ENST00000368545 MRPL10Q7Z7H8 261 aaKnown RBP9.18□□□□□ -0.94
TPM3-213ENST00000368545 CTAGE6Q86UF2 777 aa9.18□□□□□ -0.94
TPM3-213ENST00000368545 CTAGE4Q8IX94 777 aa9.18□□□□□ -0.94
TPM3-213ENST00000368545 CBARPQ8N350 705 aaPredicted RBP9.18□□□□□ -0.94
TPM3-213ENST00000368545 TMEM35BQ8NCS4 154 aa9.18□□□□□ -0.94
TPM3-213ENST00000368545 ZNF564Q8TBZ8 553 aaPredicted RBP9.18□□□□□ -0.94
TPM3-213ENST00000368545 RUBCNQ92622 972 aa9.18□□□□□ -0.94
TPM3-213ENST00000368545 C18orf25Q96B23 403 aaPredicted RBP9.18□□□□□ -0.94
TPM3-213ENST00000368545 PGBD4Q96DM1 585 aa9.18□□□□□ -0.94
TPM3-213ENST00000368545 CYFIP2Q96F07 1278 aa9.18□□□□□ -0.94
TPM3-213ENST00000368545 PPP1R10Q96QC0 940 aaKnown RBP9.18□□□□□ -0.94
TPM3-213ENST00000368545 CDCA3Q99618 268 aaPredicted RBP9.18□□□□□ -0.94
TPM3-213ENST00000368545 NUP85Q9BW27 656 aa9.18□□□□□ -0.94
TPM3-213ENST00000368545 PLVAPQ9BX97 442 aa9.18□□□□□ -0.94
TPM3-213ENST00000368545 LHX5Q9H2C1 402 aa9.18□□□□□ -0.94
TPM3-213ENST00000368545 CNOT8Q9UFF9 292 aaKnown RBP9.18□□□□□ -0.94
TPM3-213ENST00000368545 LCMT1Q9UIC8 334 aa9.18□□□□□ -0.94
TPM3-213ENST00000368545 GDF2Q9UK05 429 aaPredicted RBP9.18□□□□□ -0.94
TPM3-213ENST00000368545 AMFRQ9UKV5 643 aa9.18□□□□□ -0.94
TPM3-213ENST00000368545 APOBEC2Q9Y235 224 aaKnown RBP9.18□□□□□ -0.94
TPM3-213ENST00000368545 NR2E1Q9Y466 385 aa9.18□□□□□ -0.94
TPM3-213ENST00000368545 SCINQ9Y6U3 715 aa9.18□□□□□ -0.94
TPM3-213ENST00000368545 A0A0U1RQF3 1178 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 CDC14CA4D256 554 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 H3BQ06 376 aaPredicted RBP9.17□□□□□ -0.94
TPM3-213ENST00000368545 DDX3YO15523 660 aaKnown RBP9.17□□□□□ -0.94
TPM3-213ENST00000368545 BUB1BO60566 1050 aaPredicted RBP9.17□□□□□ -0.94
TPM3-213ENST00000368545 KCNH1O95259 989 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 CRTAMO95727 393 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 CALB1P05937 261 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 VDRP11473 427 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 PAFAH1B1P43034 410 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 TAF6P49848 677 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 AFF1P51825 1210 aaKnown RBP9.17□□□□□ -0.94
TPM3-213ENST00000368545 GFRA1P56159 465 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 ITIH3Q06033 890 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 RPS6KA1Q15418 735 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms