RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 DCAF12L1Q5VU92 463 aa16.7■□□□□ 0.26
CKS1B-202ENST00000368436 PMF1Q6P1K2 205 aa16.7■□□□□ 0.26
CKS1B-202ENST00000368436 OR2T3Q8NH03 318 aa16.7■□□□□ 0.26
CKS1B-202ENST00000368436 IRGQQ8WZA9 623 aa16.7■□□□□ 0.26
CKS1B-202ENST00000368436 CEP63Q96MT8 703 aa16.7■□□□□ 0.26
CKS1B-202ENST00000368436 ZSWIM1Q9BR11 485 aa16.7■□□□□ 0.26
CKS1B-202ENST00000368436 AKAP13Q12802 2813 aa16.69■□□□□ 0.26
CKS1B-202ENST00000368436 PSMA7O14818 248 aa16.69■□□□□ 0.26
CKS1B-202ENST00000368436 MSI1O43347 362 aaKnown RBP16.69■□□□□ 0.26
CKS1B-202ENST00000368436 SH3BP5O60239 455 aa16.69■□□□□ 0.26
CKS1B-202ENST00000368436 ACADMP11310 421 aa16.69■□□□□ 0.26
CKS1B-202ENST00000368436 ARID5AQ03989 594 aa16.69■□□□□ 0.26
CKS1B-202ENST00000368436 PTPRNQ16849 979 aa16.69■□□□□ 0.26
CKS1B-202ENST00000368436 MPP7Q5T2T1 576 aa16.69■□□□□ 0.26
CKS1B-202ENST00000368436 TMEM270Q6UE05 265 aa16.69■□□□□ 0.26
CKS1B-202ENST00000368436 ADIPOR2Q86V24 386 aa16.69■□□□□ 0.26
CKS1B-202ENST00000368436 ELOA2Q8IYF1 753 aaPredicted RBP16.69■□□□□ 0.26
CKS1B-202ENST00000368436 C1orf216Q8TAB5 229 aa16.69■□□□□ 0.26
CKS1B-202ENST00000368436 LMO3Q8TAP4 145 aa16.69■□□□□ 0.26
CKS1B-202ENST00000368436 AZIN2Q96A70 460 aa16.69■□□□□ 0.26
CKS1B-202ENST00000368436 CAMK1GQ96NX5 476 aa16.69■□□□□ 0.26
CKS1B-202ENST00000368436 NT5C1BQ96P26 610 aa16.69■□□□□ 0.26
CKS1B-202ENST00000368436 PCED1AQ9H1Q7 454 aa16.69■□□□□ 0.26
CKS1B-202ENST00000368436 HOOK1Q9UJC3 728 aaKnown RBP16.69■□□□□ 0.26
CKS1B-202ENST00000368436 KLK13Q9UKR3 277 aa16.69■□□□□ 0.26
CKS1B-202ENST00000368436 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.69■□□□□ 0.26
CKS1B-202ENST00000368436 PLA2G4CQ9UP65 541 aa16.69■□□□□ 0.26
CKS1B-202ENST00000368436 PCDHB4Q9Y5E5 795 aa16.69■□□□□ 0.26
CKS1B-202ENST00000368436 BCAT2O15382 392 aaPredicted RBP16.68■□□□□ 0.26
CKS1B-202ENST00000368436 HLA-EP13747 358 aa16.68■□□□□ 0.26
CKS1B-202ENST00000368436 CD44P16070 742 aaKnown RBP16.68■□□□□ 0.26
CKS1B-202ENST00000368436 RDXP35241 583 aaKnown RBP16.68■□□□□ 0.26
CKS1B-202ENST00000368436 RGS7P49802 495 aa16.68■□□□□ 0.26
CKS1B-202ENST00000368436 SGSHP51688 502 aa16.68■□□□□ 0.26
CKS1B-202ENST00000368436 RING1Q06587 406 aa16.68■□□□□ 0.26
CKS1B-202ENST00000368436 STIM1Q13586 685 aa16.68■□□□□ 0.26
CKS1B-202ENST00000368436 STILQ15468 1287 aa16.68■□□□□ 0.26
CKS1B-202ENST00000368436 ZNF423Q2M1K9 1284 aa16.68■□□□□ 0.26
CKS1B-202ENST00000368436 CHST9Q7L1S5 443 aa16.68■□□□□ 0.26
CKS1B-202ENST00000368436 RAB44Q7Z6P3 723 aaPredicted RBP16.68■□□□□ 0.26
CKS1B-202ENST00000368436 AHI1Q8N157 1196 aa16.68■□□□□ 0.26
CKS1B-202ENST00000368436 ZCCHC9Q8N567 271 aaKnown RBP16.68■□□□□ 0.26
CKS1B-202ENST00000368436 CYB5D2Q8WUJ1 264 aa16.68■□□□□ 0.26
CKS1B-202ENST00000368436 KAT5Q92993 513 aa16.68■□□□□ 0.26
CKS1B-202ENST00000368436 HSFY1Q96LI6 401 aa16.68■□□□□ 0.26
CKS1B-202ENST00000368436 ABCB8Q9NUT2 735 aa16.68■□□□□ 0.26
CKS1B-202ENST00000368436 GGA2Q9UJY4 613 aa16.68■□□□□ 0.26
CKS1B-202ENST00000368436 IGF2RP11717 2491 aa16.68■□□□□ 0.26
CKS1B-202ENST00000368436 NUMA1Q14980 2115 aa16.67■□□□□ 0.26
CKS1B-202ENST00000368436 CFAP47Q6ZTR5 3102 aa16.67■□□□□ 0.26
CKS1B-202ENST00000368436 P4HA2O15460 535 aa16.67■□□□□ 0.26
CKS1B-202ENST00000368436 ZNF883P0CG24 379 aa16.67■□□□□ 0.26
CKS1B-202ENST00000368436 PABPC1P11940 636 aaKnown RBP16.67■□□□□ 0.26
CKS1B-202ENST00000368436 PPP1R2P41236 205 aa16.67■□□□□ 0.26
CKS1B-202ENST00000368436 BNC1Q01954 994 aa16.67■□□□□ 0.26
CKS1B-202ENST00000368436 TRIP6Q15654 476 aaKnown RBP16.67■□□□□ 0.26
CKS1B-202ENST00000368436 FNDC3BQ53EP0 1204 aaKnown RBP16.67■□□□□ 0.26
CKS1B-202ENST00000368436 FAM133BQ5BKY9 247 aaKnown RBP16.67■□□□□ 0.26
CKS1B-202ENST00000368436 PIK3R6Q5UE93 754 aa16.67■□□□□ 0.26
CKS1B-202ENST00000368436 NUGGCQ68CJ6 796 aa16.67■□□□□ 0.26
CKS1B-202ENST00000368436 TTI2Q6NXR4 508 aa16.67■□□□□ 0.26
CKS1B-202ENST00000368436 FOXR2Q6PJQ5 311 aa16.67■□□□□ 0.26
CKS1B-202ENST00000368436 NAXDQ8IW45 347 aa16.67■□□□□ 0.26
CKS1B-202ENST00000368436 UNC45BQ8IWX7 931 aa16.67■□□□□ 0.26
CKS1B-202ENST00000368436 PPM1KQ8N3J5 372 aa16.67■□□□□ 0.26
CKS1B-202ENST00000368436 LMLNQ96KR4 655 aa16.67■□□□□ 0.26
CKS1B-202ENST00000368436 MIR1-1HGQ9H1L0 117 aa16.67■□□□□ 0.26
CKS1B-202ENST00000368436 LHX5Q9H2C1 402 aa16.67■□□□□ 0.26
CKS1B-202ENST00000368436 FBRSQ9HAH7 460 aa16.67■□□□□ 0.26
CKS1B-202ENST00000368436 EIF2B4Q9UI10 523 aaKnown RBP16.67■□□□□ 0.26
CKS1B-202ENST00000368436 MAN1B1Q9UKM7 699 aa16.67■□□□□ 0.26
CKS1B-202ENST00000368436 ASPMQ8IZT6 3477 aa16.67■□□□□ 0.26
CKS1B-202ENST00000368436 GOLGA6L7A0A1B0GV03 622 aa16.66■□□□□ 0.26
CKS1B-202ENST00000368436 M0QYV0 167 aa16.66■□□□□ 0.26
CKS1B-202ENST00000368436 PIK3R2O00459 728 aa16.66■□□□□ 0.26
CKS1B-202ENST00000368436 IRAK2O43187 625 aa16.66■□□□□ 0.26
CKS1B-202ENST00000368436 ACSL4O60488 711 aa16.66■□□□□ 0.26
CKS1B-202ENST00000368436 LTFP02788 710 aa16.66■□□□□ 0.26
CKS1B-202ENST00000368436 FYNP06241 537 aa16.66■□□□□ 0.26
CKS1B-202ENST00000368436 DLDP09622 509 aaKnown RBP16.66■□□□□ 0.26
CKS1B-202ENST00000368436 BRD2P25440 801 aaKnown RBP16.66■□□□□ 0.26
CKS1B-202ENST00000368436 SLC6A4P31645 630 aa16.66■□□□□ 0.26
CKS1B-202ENST00000368436 RPL34P49207 117 aaKnown RBP16.66■□□□□ 0.26
CKS1B-202ENST00000368436 SLC11A2P49281 568 aa16.66■□□□□ 0.26
CKS1B-202ENST00000368436 CCDC40Q4G0X9 1142 aa16.66■□□□□ 0.26
CKS1B-202ENST00000368436 MBLAC2Q68D91 279 aa16.66■□□□□ 0.26
CKS1B-202ENST00000368436 ISM2Q6H9L7 571 aa16.66■□□□□ 0.26
CKS1B-202ENST00000368436 RFWD3Q6PCD5 774 aa16.66■□□□□ 0.26
CKS1B-202ENST00000368436 FAM124AQ86V42 546 aa16.66■□□□□ 0.26
CKS1B-202ENST00000368436 CACUL1Q86Y37 369 aa16.66■□□□□ 0.26
CKS1B-202ENST00000368436 CHCHD4Q8N4Q1 142 aa16.66■□□□□ 0.26
CKS1B-202ENST00000368436 ZNF366Q8N895 744 aa16.66■□□□□ 0.26
CKS1B-202ENST00000368436 ZNF557Q8N988 423 aaPredicted RBP16.66■□□□□ 0.26
CKS1B-202ENST00000368436 WFDC5Q8TCV5 224 aa16.66■□□□□ 0.26
CKS1B-202ENST00000368436 CLEC4CQ8WTT0 213 aa16.66■□□□□ 0.26
CKS1B-202ENST00000368436 PRSS16Q9NQE7 514 aa16.66■□□□□ 0.26
CKS1B-202ENST00000368436 PCDHB9Q9Y5E1 797 aa16.66■□□□□ 0.26
CKS1B-202ENST00000368436 TMEM131Q92545 1883 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 PPP1R3GB7ZBB8 358 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 TBL1XO60907 577 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms