RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 CPT1BQ92523 772 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 STMN2Q93045 179 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 BICD1Q96G01 975 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 CASD1Q96PB1 797 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 PPP1R16BQ96T49 567 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 FAM167BQ9BTA0 163 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 PHF7Q9BWX1 381 aaPredicted RBP11.92□□□□□ -0.5
USF1-201ENST00000368019 S1PR5Q9H228 398 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 C1orf21Q9H246 121 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 STN1Q9H668 368 aaKnown RBP11.92□□□□□ -0.5
USF1-201ENST00000368019 NPHS2Q9NP85 383 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 WDR35Q9P2L0 1181 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 GABBR1Q9UBS5 961 aa11.92□□□□□ -0.5
USF1-201ENST00000368019 TMEM221A6NGB7 291 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 M0R296 226 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 SGK1O00141 431 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 MAP3K7O43318 606 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 FKBP6O75344 327 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 ENTPD5O75356 428 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 SKAP2O75563 359 aaPredicted RBP11.91□□□□□ -0.5
USF1-201ENST00000368019 VNN1O95497 513 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 DLDP09622 509 aaKnown RBP11.91□□□□□ -0.5
USF1-201ENST00000368019 PIM1P11309 404 aaPredicted RBP11.91□□□□□ -0.5
USF1-201ENST00000368019 LAG3P18627 525 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 LIG4P49917 911 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 CLCN3P51790 818 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 NLRP11P59045 1033 aaKnown RBP11.91□□□□□ -0.5
USF1-201ENST00000368019 YWHAEP62258 255 aaKnown RBP11.91□□□□□ -0.5
USF1-201ENST00000368019 NOP14P78316 857 aaKnown RBP11.91□□□□□ -0.5
USF1-201ENST00000368019 ZXDAP98168 799 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 XIAPP98170 497 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 ZNF252P-AS1Q0IIN9 211 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 RCN1Q15293 331 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 HADHQ16836 314 aaKnown RBP11.91□□□□□ -0.5
USF1-201ENST00000368019 KHDC1Q4VXA5 237 aaKnown RBP11.91□□□□□ -0.5
USF1-201ENST00000368019 SPOUT1Q5T280 376 aaKnown RBP11.91□□□□□ -0.5
USF1-201ENST00000368019 LGSNQ5TDP6 509 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 ATG16L1Q676U5 607 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 PLA2G4FQ68DD2 849 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 EFCAB12Q6NXP0 572 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 TMEM154Q6P9G4 183 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 KYAT3Q6YP21 454 aaKnown RBP11.91□□□□□ -0.5
USF1-201ENST00000368019 SH2D5Q6ZV89 423 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 TAS1R3Q7RTX0 852 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 PRUNE1Q86TP1 453 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 VPS52Q8N1B4 723 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 GLIS1Q8NBF1 620 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 CCDC110Q8TBZ0 833 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 ZNF606Q8WXB4 792 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 GATA6Q92908 595 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 MCUR1Q96AQ8 359 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 DTNBP1Q96EV8 351 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 SYT15Q9BQS2 421 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 FAM213AQ9BRX8 229 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 PI4K2AQ9BTU6 479 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 TMEM120AQ9BXJ8 343 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 IMPG2Q9BZV3 1241 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 YIPF3Q9GZM5 350 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 TMEM134Q9H6X4 195 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 KCNK13Q9HB14 408 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 PAPOLBQ9NRJ5 636 aaKnown RBP11.91□□□□□ -0.5
USF1-201ENST00000368019 ARL8BQ9NVJ2 186 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 CPSF2Q9P2I0 782 aaKnown RBP11.91□□□□□ -0.5
USF1-201ENST00000368019 HEY2Q9UBP5 337 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 USTQ9Y2C2 406 aa11.91□□□□□ -0.5
USF1-201ENST00000368019 C3orf70A6NLC5 250 aaPredicted RBP11.9□□□□□ -0.5
USF1-201ENST00000368019 CHADO15335 359 aa11.9□□□□□ -0.5
USF1-201ENST00000368019 MT-ND3P03897 115 aa11.9□□□□□ -0.5
USF1-201ENST00000368019 ESRRAP11474 423 aaPredicted RBP11.9□□□□□ -0.5
USF1-201ENST00000368019 KRT10P13645 584 aa11.9□□□□□ -0.5
USF1-201ENST00000368019 TNNI1P19237 187 aa11.9□□□□□ -0.5
USF1-201ENST00000368019 POLR2BP30876 1174 aaKnown RBP11.9□□□□□ -0.5
USF1-201ENST00000368019 STIP1P31948 543 aaKnown RBP11.9□□□□□ -0.5
USF1-201ENST00000368019 SSR1P43307 286 aaKnown RBP11.9□□□□□ -0.5
USF1-201ENST00000368019 NAMPTP43490 491 aa11.9□□□□□ -0.5
USF1-201ENST00000368019 DYNC1I2Q13409 638 aaKnown RBP11.9□□□□□ -0.5
USF1-201ENST00000368019 TARBP2Q15633 366 aaKnown RBP11.9□□□□□ -0.5
USF1-201ENST00000368019 TMCO4Q5TGY1 634 aa11.9□□□□□ -0.5
USF1-201ENST00000368019 TRIM68Q6AZZ1 485 aa11.9□□□□□ -0.5
USF1-201ENST00000368019 SYCE2Q6PIF2 218 aa11.9□□□□□ -0.5
USF1-201ENST00000368019 TMEM270Q6UE05 265 aa11.9□□□□□ -0.5
USF1-201ENST00000368019 KCNT2Q6UVM3 1135 aa11.9□□□□□ -0.5
USF1-201ENST00000368019 C4orf22Q6V702 233 aa11.9□□□□□ -0.5
USF1-201ENST00000368019 ZNF598Q86UK7 904 aaKnown RBP11.9□□□□□ -0.5
USF1-201ENST00000368019 PALM2Q8IXS6 379 aa11.9□□□□□ -0.5
USF1-201ENST00000368019 SPDYE1Q8NFV5 336 aaPredicted RBP11.9□□□□□ -0.5
USF1-201ENST00000368019 RFWD2Q8NHY2 731 aa11.9□□□□□ -0.5
USF1-201ENST00000368019 LRRC39Q96DD0 335 aa11.9□□□□□ -0.5
USF1-201ENST00000368019 OXNAD1Q96HP4 312 aaPredicted RBP11.9□□□□□ -0.5
USF1-201ENST00000368019 FAM167AQ96KS9 214 aa11.9□□□□□ -0.5
USF1-201ENST00000368019 CEP170P1Q96L14 293 aa11.9□□□□□ -0.5
USF1-201ENST00000368019 ZNF184Q99676 751 aaPredicted RBP11.9□□□□□ -0.5
USF1-201ENST00000368019 WWP1Q9H0M0 922 aa11.9□□□□□ -0.5
USF1-201ENST00000368019 LHX5Q9H2C1 402 aa11.9□□□□□ -0.5
USF1-201ENST00000368019 FAM96AQ9H5X1 160 aa11.9□□□□□ -0.5
USF1-201ENST00000368019 XPNPEP1Q9NQW7 623 aa11.9□□□□□ -0.5
USF1-201ENST00000368019 TAS2R1Q9NYW7 299 aa11.9□□□□□ -0.5
USF1-201ENST00000368019 AGO2Q9UKV8 859 aaKnown RBP11.9□□□□□ -0.5
USF1-201ENST00000368019 A0A0U1RQF3 1178 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 CFAP69A5D8W1 941 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms