RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 PTPRZ1P23471 2315 aaPredicted RBP24.83■■□□□ 1.56
PFDN2-201ENST00000368010 TBL1XO60907 577 aa24.82■■□□□ 1.56
PFDN2-201ENST00000368010 RETP07949 1114 aa24.82■■□□□ 1.56
PFDN2-201ENST00000368010 SLC2A3P11169 496 aa24.82■■□□□ 1.56
PFDN2-201ENST00000368010 NOS2P35228 1153 aa24.82■■□□□ 1.56
PFDN2-201ENST00000368010 SCNN1AP37088 669 aa24.82■■□□□ 1.56
PFDN2-201ENST00000368010 EIF4EBP2Q13542 120 aaPredicted RBP24.82■■□□□ 1.56
PFDN2-201ENST00000368010 FAM160A2Q8N612 972 aaPredicted RBP24.82■■□□□ 1.56
PFDN2-201ENST00000368010 ATP6V0D2Q8N8Y2 350 aa24.82■■□□□ 1.56
PFDN2-201ENST00000368010 BTN2A3PQ96KV6 586 aa24.82■■□□□ 1.56
PFDN2-201ENST00000368010 PRICKLE1Q96MT3 831 aaPredicted RBP24.82■■□□□ 1.56
PFDN2-201ENST00000368010 GABRG3Q99928 467 aa24.82■■□□□ 1.56
PFDN2-201ENST00000368010 CIPCQ9C0C6 399 aa24.82■■□□□ 1.56
PFDN2-201ENST00000368010 NUCKS1Q9H1E3 243 aaKnown RBP24.82■■□□□ 1.56
PFDN2-201ENST00000368010 RTN4Q9NQC3 1192 aaKnown RBP24.82■■□□□ 1.56
PFDN2-201ENST00000368010 CACNA2D2Q9NY47 1150 aa24.82■■□□□ 1.56
PFDN2-201ENST00000368010 SLC12A6Q9UHW9 1150 aa24.82■■□□□ 1.56
PFDN2-201ENST00000368010 SYNJ2BP-COX16A0A087WUM0 186 aa24.81■■□□□ 1.56
PFDN2-201ENST00000368010 FAM170AA1A519 330 aa24.81■■□□□ 1.56
PFDN2-201ENST00000368010 NPC1O15118 1278 aa24.81■■□□□ 1.56
PFDN2-201ENST00000368010 HLA-FP30511 346 aa24.81■■□□□ 1.56
PFDN2-201ENST00000368010 CCR1P32246 355 aa24.81■■□□□ 1.56
PFDN2-201ENST00000368010 IQCB1Q15051 598 aa24.81■■□□□ 1.56
PFDN2-201ENST00000368010 MS4A13Q5J8X5 152 aa24.81■■□□□ 1.56
PFDN2-201ENST00000368010 FAM102AQ5T9C2 384 aaPredicted RBP24.81■■□□□ 1.56
PFDN2-201ENST00000368010 TRIM72Q6ZMU5 477 aa24.81■■□□□ 1.56
PFDN2-201ENST00000368010 PGBD3Q8N328 593 aa24.81■■□□□ 1.56
PFDN2-201ENST00000368010 WFIKKN2Q8TEU8 576 aa24.81■■□□□ 1.56
PFDN2-201ENST00000368010 HMGB4Q8WW32 186 aa24.81■■□□□ 1.56
PFDN2-201ENST00000368010 CPA5Q8WXQ8 436 aa24.81■■□□□ 1.56
PFDN2-201ENST00000368010 RNF34Q969K3 372 aa24.81■■□□□ 1.56
PFDN2-201ENST00000368010 ELOVL2Q9NXB9 296 aa24.81■■□□□ 1.56
PFDN2-201ENST00000368010 RRN3Q9NYV6 651 aa24.81■■□□□ 1.56
PFDN2-201ENST00000368010 COX16Q9P0S2 106 aa24.81■■□□□ 1.56
PFDN2-201ENST00000368010 XPO7Q9UIA9 1087 aaKnown RBP24.81■■□□□ 1.56
PFDN2-201ENST00000368010 STAP1Q9ULZ2 295 aa24.81■■□□□ 1.56
PFDN2-201ENST00000368010 EP300Q09472 2414 aaPredicted RBP24.81■■□□□ 1.56
PFDN2-201ENST00000368010 GVINP1Q7Z2Y8 2422 aa24.81■■□□□ 1.56
PFDN2-201ENST00000368010 A0A1W2PQF6 199 aa24.8■■□□□ 1.56
PFDN2-201ENST00000368010 ZBTB24O43167 697 aaPredicted RBP24.8■■□□□ 1.56
PFDN2-201ENST00000368010 TEX33O43247 280 aa24.8■■□□□ 1.56
PFDN2-201ENST00000368010 TIMM44O43615 452 aa24.8■■□□□ 1.56
PFDN2-201ENST00000368010 CYP1A1P04798 512 aaPredicted RBP24.8■■□□□ 1.56
PFDN2-201ENST00000368010 CHRNB2P17787 502 aa24.8■■□□□ 1.56
PFDN2-201ENST00000368010 ABCB4P21439 1286 aa24.8■■□□□ 1.56
PFDN2-201ENST00000368010 MATKP42679 507 aa24.8■■□□□ 1.56
PFDN2-201ENST00000368010 FMO1Q01740 532 aa24.8■■□□□ 1.56
PFDN2-201ENST00000368010 RNF43Q68DV7 783 aa24.8■■□□□ 1.56
PFDN2-201ENST00000368010 KBTBD6Q86V97 674 aa24.8■■□□□ 1.56
PFDN2-201ENST00000368010 C11orf74Q86VG3 221 aa24.8■■□□□ 1.56
PFDN2-201ENST00000368010 CHSY1Q86X52 802 aa24.8■■□□□ 1.56
PFDN2-201ENST00000368010 XYLT1Q86Y38 959 aa24.8■■□□□ 1.56
PFDN2-201ENST00000368010 GPR161Q8N6U8 529 aaKnown RBP24.8■■□□□ 1.56
PFDN2-201ENST00000368010 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.8■■□□□ 1.56
PFDN2-201ENST00000368010 ABCB8Q9NUT2 735 aa24.8■■□□□ 1.56
PFDN2-201ENST00000368010 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.8■■□□□ 1.56
PFDN2-201ENST00000368010 STIM2Q9P246 746 aa24.8■■□□□ 1.56
PFDN2-201ENST00000368010 THAP10Q9P2Z0 257 aaPredicted RBP24.8■■□□□ 1.56
PFDN2-201ENST00000368010 GGA2Q9UJY4 613 aa24.8■■□□□ 1.56
PFDN2-201ENST00000368010 STON1Q9Y6Q2 735 aa24.8■■□□□ 1.56
PFDN2-201ENST00000368010 KCNU1A8MYU2 1149 aa24.79■■□□□ 1.56
PFDN2-201ENST00000368010 M0QYT0 321 aa24.79■■□□□ 1.56
PFDN2-201ENST00000368010 PABPC1P11940 636 aaKnown RBP24.79■■□□□ 1.56
PFDN2-201ENST00000368010 RNASE9P60153 205 aaKnown RBP24.79■■□□□ 1.56
PFDN2-201ENST00000368010 TPM4P67936 248 aa24.79■■□□□ 1.56
PFDN2-201ENST00000368010 ARID5AQ03989 594 aa24.79■■□□□ 1.56
PFDN2-201ENST00000368010 NME3Q13232 169 aa24.79■■□□□ 1.56
PFDN2-201ENST00000368010 MTA1Q13330 715 aa24.79■■□□□ 1.56
PFDN2-201ENST00000368010 SKOR2Q2VWA4 1001 aaPredicted RBP24.79■■□□□ 1.56
PFDN2-201ENST00000368010 C2CD6Q53TS8 623 aa24.79■■□□□ 1.56
PFDN2-201ENST00000368010 RAP1GAP2Q684P5 730 aa24.79■■□□□ 1.56
PFDN2-201ENST00000368010 MFN1Q8IWA4 741 aa24.79■■□□□ 1.56
PFDN2-201ENST00000368010 CCDC117Q8IWD4 279 aaPredicted RBP24.79■■□□□ 1.56
PFDN2-201ENST00000368010 KIAA2013Q8IYS2 634 aa24.79■■□□□ 1.56
PFDN2-201ENST00000368010 AHI1Q8N157 1196 aa24.79■■□□□ 1.56
PFDN2-201ENST00000368010 ZC3H10Q96K80 434 aaKnown RBP24.79■■□□□ 1.56
PFDN2-201ENST00000368010 CBX8Q9HC52 389 aa24.79■■□□□ 1.56
PFDN2-201ENST00000368010 GOLGA8SH3BPF8 625 aa24.78■■□□□ 1.56
PFDN2-201ENST00000368010 DCLK1O15075 740 aa24.78■■□□□ 1.56
PFDN2-201ENST00000368010 TACR2P21452 398 aa24.78■■□□□ 1.56
PFDN2-201ENST00000368010 RPS24P62847 133 aaKnown RBP24.78■■□□□ 1.56
PFDN2-201ENST00000368010 STARD3Q14849 445 aa24.78■■□□□ 1.56
PFDN2-201ENST00000368010 ELF2Q15723 593 aa24.78■■□□□ 1.56
PFDN2-201ENST00000368010 TMEM215Q68D42 235 aa24.78■■□□□ 1.56
PFDN2-201ENST00000368010 CHST9Q7L1S5 443 aa24.78■■□□□ 1.56
PFDN2-201ENST00000368010 LGI2Q8N0V4 545 aa24.78■■□□□ 1.56
PFDN2-201ENST00000368010 OLIG1Q8TAK6 271 aa24.78■■□□□ 1.56
PFDN2-201ENST00000368010 MYEOVQ96EZ4 313 aa24.78■■□□□ 1.56
PFDN2-201ENST00000368010 LOXL4Q96JB6 756 aa24.78■■□□□ 1.56
PFDN2-201ENST00000368010 SPACA7Q96KW9 195 aa24.78■■□□□ 1.56
PFDN2-201ENST00000368010 NPY6RQ99463 290 aa24.78■■□□□ 1.56
PFDN2-201ENST00000368010 INVSQ9Y283 1065 aa24.78■■□□□ 1.56
PFDN2-201ENST00000368010 RAD54BQ9Y620 910 aa24.78■■□□□ 1.56
PFDN2-201ENST00000368010 F5H5T6 163 aa24.77■■□□□ 1.56
PFDN2-201ENST00000368010 CAVIN2O95810 425 aa24.77■■□□□ 1.56
PFDN2-201ENST00000368010 SERPINC1P01008 464 aa24.77■■□□□ 1.56
PFDN2-201ENST00000368010 CCDC172P0C7W6 258 aa24.77■■□□□ 1.56
PFDN2-201ENST00000368010 GABRG2P18507 467 aa24.77■■□□□ 1.56
PFDN2-201ENST00000368010 MMP8P22894 467 aa24.77■■□□□ 1.56
PFDN2-201ENST00000368010 IL12RB1P42701 662 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms