RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 TRAV19A0A0A6YYK7 116 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 A0A1W2PRU2 124 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 KCNK3O14649 394 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 MDM4O15151 490 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 MSI1O43347 362 aaKnown RBP7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 IGLV3-25P01717 112 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 APOEP02649 317 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 KRT1P04264 644 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 FYNP06241 537 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 RHOP08100 348 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 SLC2A3P11169 496 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 MYL4P12829 197 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 GJA1P17302 382 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 PTPN2P17706 415 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 TFE3P19532 575 aaPredicted RBP7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 CCR1P32246 355 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 ATP5C1P36542 298 aaKnown RBP7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 CETN2P41208 172 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 PGFP49763 221 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 ATXN1P54253 815 aaKnown RBP7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 EPHA5P54756 1037 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 RWDD2BP57060 319 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 TAS2R40P59535 323 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 DMWDQ09019 674 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 EFEMP1Q12805 493 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 SRSF5Q13243 272 aaKnown RBP7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 FZD5Q13467 585 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 KRT81Q14533 505 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 SMTNL2Q2TAL5 461 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 EFHC2Q5JST6 749 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 BRMS1LQ5PSV4 323 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 SH3PXD2AQ5TCZ1 1133 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 SEL1L2Q5TEA6 688 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 OTUD1Q5VV17 481 aaPredicted RBP7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 PAPD7Q5XG87 772 aaKnown RBP7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 TANGO2Q6ICL3 276 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 SCYL2Q6P3W7 929 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 ERMP1Q7Z2K6 904 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 BNIPLQ7Z465 357 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 FAM131BQ86XD5 332 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 CPNE8Q86YQ8 564 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 PSTKQ8IV42 348 aaKnown RBP7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 KATNAL2Q8IYT4 538 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 ZNF276Q8N554 614 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 TEKT4Q8WW24 435 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 HSPH1Q92598 858 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 KRT35Q92764 455 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 RNF34Q969K3 372 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 NTAN1Q96AB6 310 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 HES6Q96HZ4 224 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 RBM41Q96IZ5 413 aaKnown RBP7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 OSBPL9Q96SU4 736 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 PSMB7Q99436 277 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 TLR10Q9BXR5 811 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 CARD9Q9H257 536 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 ATXN3LQ9H3M9 355 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 CCSER2Q9H7U1 834 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 ARHGEF3Q9NR81 526 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 PIGVQ9NUD9 493 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 PCSK1NQ9UHG2 260 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 SNX12Q9UMY4 172 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 TLR6Q9Y2C9 796 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 HBS1LQ9Y450 684 aaKnown RBP7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 PCDHA3Q9Y5H8 950 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 SAR1BQ9Y6B6 198 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 ATG2BQ96BY7 2078 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 GREB1Q4ZG55 1949 aa7.03□□□□□ -1.28
RNU1-55P-201ENST00000365510 ZNF638Q14966 1978 aaKnown RBP7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 SLC12A8A0AV02 714 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 LRRD1A4D1F6 860 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 CES2O00748 559 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 ZNF197O14709 1029 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 FANCGO15287 622 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 DDX3YO15523 660 aaKnown RBP7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 COCHO43405 550 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 URI1O94763 535 aaPredicted RBP7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 ENDOD1O94919 500 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 PAPLNO95428 1278 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 OAS1P00973 400 aaKnown RBP7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 F11P03951 625 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 CKMP06732 381 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 MBL2P11226 248 aaPredicted RBP7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 TCF4P15884 667 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 PRLRP16471 622 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 TGM1P22735 817 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 IL1R2P27930 398 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 MARCKSL1P49006 195 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 CXCR3P49682 368 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 TBX4P57082 545 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 PITX1P78337 314 aaPredicted RBP7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 COG7P83436 770 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 CYP4F8P98187 520 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 FOXK2Q01167 660 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 AMPD2Q01433 879 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 CKAP4Q07065 602 aaKnown RBP7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 SCAPQ12770 1279 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 TUBB2AQ13885 445 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 GRM2Q14416 872 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms