RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 SH3BP5O60239 455 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 CER1O95813 267 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 IGLV3-19P01714 112 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 LTFP02788 710 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 ATP5BP06576 529 aaKnown RBP8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 PAEPP09466 180 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 PABPC1P11940 636 aaKnown RBP8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 HLA-EP13747 358 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 HLA-FP30511 346 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 PPP1R2P41236 205 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 RGS7P49802 495 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 DAOAP59103 153 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 FAM193AP78312 1265 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 CAMK2GQ13555 558 aaPredicted RBP8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 STILQ15468 1287 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 TRIP6Q15654 476 aaKnown RBP8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 ZNF423Q2M1K9 1284 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 NUGGCQ68CJ6 796 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 MSANTD2Q6P1R3 559 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 LCLAT1Q6UWP7 414 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 CHST9Q7L1S5 443 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 UNC45BQ8IWX7 931 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 AHI1Q8N157 1196 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 SCML4Q8N228 414 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 ZNF366Q8N895 744 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 OR2T3Q8NH03 318 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 CYB5D2Q8WUJ1 264 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 IRGQQ8WZA9 623 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 ERCC4Q92889 916 aaPredicted RBP8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 CEP63Q96MT8 703 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 CAMK1GQ96NX5 476 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 TMEM121BQ9BXQ6 578 aaPredicted RBP8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 PCED1AQ9H1Q7 454 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 LHX5Q9H2C1 402 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 FBRSQ9HAH7 460 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 EIF2B4Q9UI10 523 aaKnown RBP8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 STOML2Q9UJZ1 356 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 MSRB2Q9Y3D2 182 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 FRYQ5TBA9 3013 aa8.52□□□□□ -1.05
RNU4-59P-201ENST00000364447 TMEM131Q92545 1883 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 PIK3R2O00459 728 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 IRAK2O43187 625 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 TBL1XO60907 577 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 GJB3O75712 270 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 FBXO21O94952 628 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 DNTTP04053 509 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 DLDP09622 509 aaKnown RBP8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 POLR2EP19388 210 aaKnown RBP8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 BRD2P25440 801 aaKnown RBP8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 MATKP42679 507 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 TBX4P57082 545 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 ST8SIA6P61647 398 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 RING1Q06587 406 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 BECN1Q14457 450 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 TEAD4Q15561 434 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 CNGA2Q16280 664 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 TTC31Q49AM3 519 aaPredicted RBP8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 PKDCCQ504Y2 493 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 MPP7Q5T2T1 576 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 MBLAC2Q68D91 279 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 ISM2Q6H9L7 571 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 KLHL10Q6JEL2 608 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 PMF1Q6P1K2 205 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 RFWD3Q6PCD5 774 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 IL27RAQ6UWB1 636 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 MFN1Q8IWA4 741 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 CCDC117Q8IWD4 279 aaPredicted RBP8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 CHCHD4Q8N4Q1 142 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 UBR7Q8N806 425 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 ZNF557Q8N988 423 aaPredicted RBP8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 RBBP8NLQ8NC74 664 aaPredicted RBP8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 ENGASEQ8NFI3 743 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 SPATA20Q8TB22 786 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 SETD7Q8WTS6 366 aaKnown RBP8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 TFAP2BQ92481 460 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 DHTKD1Q96HY7 919 aaPredicted RBP8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 DDX50Q9BQ39 737 aaKnown RBP8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 MIS12Q9H081 205 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 TMEM245Q9H330 911 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 GAREM1Q9H706 876 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 STIM2Q9P246 746 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 APOBEC2Q9Y235 224 aaKnown RBP8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 NUMA1Q14980 2115 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 CHD6Q8TD26 2715 aa8.51□□□□□ -1.05
RNU4-59P-201ENST00000364447 FAM208BQ5VWN6 2430 aa8.5□□□□□ -1.05
RNU4-59P-201ENST00000364447 GOLGA6L7A0A1B0GV03 622 aa8.5□□□□□ -1.05
RNU4-59P-201ENST00000364447 BICDL2A1A5D9 508 aa8.5□□□□□ -1.05
RNU4-59P-201ENST00000364447 SRRM3A6NNA2 597 aaPredicted RBP8.5□□□□□ -1.05
RNU4-59P-201ENST00000364447 PMM2O15305 246 aa8.5□□□□□ -1.05
RNU4-59P-201ENST00000364447 SART1O43290 800 aaKnown RBP8.5□□□□□ -1.05
RNU4-59P-201ENST00000364447 ACSL4O60488 711 aa8.5□□□□□ -1.05
RNU4-59P-201ENST00000364447 SEMA4FO95754 770 aa8.5□□□□□ -1.05
RNU4-59P-201ENST00000364447 IGLV3-27P01718 113 aa8.5□□□□□ -1.05
RNU4-59P-201ENST00000364447 FTH1P19P0C7X4 201 aa8.5□□□□□ -1.05
RNU4-59P-201ENST00000364447 ZNF883P0CG24 379 aa8.5□□□□□ -1.05
RNU4-59P-201ENST00000364447 ACSL1P33121 698 aa8.5□□□□□ -1.05
RNU4-59P-201ENST00000364447 CSNK1EP49674 416 aaKnown RBP8.5□□□□□ -1.05
RNU4-59P-201ENST00000364447 SGSHP51688 502 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms