RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 PSMC2P35998 433 aaKnown RBP4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 MPLP40238 635 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 GRIA3P42263 894 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 PCP4P48539 62 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 JAK3P52333 1124 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 TAS2R50P59544 299 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 RAE1P78406 368 aaKnown RBP4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 CFHR3Q02985 330 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 RNASELQ05823 741 aaKnown RBP4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 LMAN2Q12907 356 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 MPP3Q13368 585 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 THOC5Q13769 683 aaKnown RBP4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 SPATS1Q496A3 300 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 LRRC24Q50LG9 513 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 AARS2Q5JTZ9 985 aaKnown RBP4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 TMEM63BQ5T3F8 832 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 SLC9C2Q5TAH2 1124 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 DENND1BQ6P3S1 775 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 DSTYKQ6XUX3 929 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 PEG10Q86TG7 708 aaKnown RBP4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 LCORLQ8N3X6 602 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 LINS1Q8NG48 757 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 ARRDC3Q96B67 414 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 HERC2P3Q9BVR0 1158 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 RNF26Q9BY78 433 aaPredicted RBP4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 PAIP1Q9H074 479 aaKnown RBP4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 SMC4Q9NTJ3 1288 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 ABHD10Q9NUJ1 306 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 FZD4Q9ULV1 537 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 ADAMTS5Q9UNA0 930 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 CYP46A1Q9Y6A2 500 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 SCINQ9Y6U3 715 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 COL4A3Q01955 1670 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 QSOX1O00391 747 aa4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 DDX58O95786 925 aaKnown RBP4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 TBX18O95935 607 aa4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 C1RP00736 705 aa4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 ELFN1P0C7U0 828 aa4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 CPA1P15085 419 aa4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 NDUFB7P17568 137 aa4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 GALNSP34059 522 aa4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 ADRA1BP35368 520 aa4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 AVPR1BP47901 424 aa4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 CASP6P55212 293 aa4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 EEFSECP57772 596 aaKnown RBP4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 MRPS35P82673 323 aaKnown RBP4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 KRTAP1-1Q07627 177 aa4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 RNASE12Q5GAN4 147 aaKnown RBP4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 L1TD1Q5T7N2 865 aaKnown RBP4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 LIPMQ5VYY2 423 aa4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 ACAD10Q6JQN1 1059 aa4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 MZT2BQ6NZ67 158 aa4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 KIRREL2Q6UWL6 708 aa4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 Q6YL49 198 aa4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 SYNE3Q6ZMZ3 975 aa4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 LRRC8DQ7L1W4 858 aa4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 LAS2Q8IYD9 372 aa4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 TCP11L2Q8N4U5 519 aa4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 ANKRD44Q8N8A2 993 aa4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 CLEC4CQ8WTT0 213 aa4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 RBM17Q96I25 401 aaKnown RBP4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 PDLIM2Q96JY6 352 aa4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 ELOVL1Q9BW60 279 aa4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 OSBPL5Q9H0X9 879 aaPredicted RBP4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 SYNPO2LQ9H987 977 aa4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 USP29Q9HBJ7 922 aa4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 PDE11AQ9HCR9 933 aa4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 ALG13Q9NP73 1137 aaKnown RBP4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 COPG1Q9Y678 874 aaKnown RBP4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 EPN1Q9Y6I3 576 aaPredicted RBP4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 SPATA31A1Q5TZJ5 1347 aa4.17□□□□□ -1.74
RNU6-28P-201ENST00000362378 A0A087X0M5 115 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 A0A1B0GX30 115 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 LINC00473A8K010 186 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 H3BNC9 293 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 GCOM1H8Y6P7 765 aaPredicted RBP4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 DHX16O60231 1041 aaKnown RBP4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 TMEM63AO94886 807 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 KAT7O95251 611 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 ALDOAP04075 364 aaKnown RBP4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 PEPDP12955 493 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 APEHP13798 732 aaKnown RBP4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 SFPQP23246 707 aaKnown RBP eCLIP4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 FPR3P25089 353 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 PGM1P36871 562 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 TBL3Q12788 808 aaKnown RBP4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 LSM12Q3MHD2 195 aaKnown RBP4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 TMEM88Q6PEY1 159 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 KIAA1324Q6UXG2 1013 aaKnown RBP4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 KYAT3Q6YP21 454 aaKnown RBP4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 GALNT4Q8N4A0 578 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 SLC44A3Q8N4M1 653 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 ACTRT2Q8TDY3 377 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 TBC1D5Q92609 795 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 STAMQ92783 540 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 ZUFSPQ96AP4 578 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 RNF125Q96EQ8 232 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 MASTLQ96GX5 879 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 C7orf26Q96N11 449 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms