RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 PQLC3Q8N755 202 aa18.65■□□□□ 0.58
CCDC7-203ENST00000362006 MAGEB5Q9BZ81 275 aa18.65■□□□□ 0.58
CCDC7-203ENST00000362006 DDX47Q9H0S4 455 aaKnown RBP18.65■□□□□ 0.58
CCDC7-203ENST00000362006 PCYOX1Q9UHG3 505 aa18.65■□□□□ 0.58
CCDC7-203ENST00000362006 TRAV19A0A0A6YYK7 116 aa18.64■□□□□ 0.57
CCDC7-203ENST00000362006 MOCS2O96007 188 aaPredicted RBP18.64■□□□□ 0.57
CCDC7-203ENST00000362006 COILP38432 576 aaPredicted RBP18.64■□□□□ 0.57
CCDC7-203ENST00000362006 NR2C2P49116 596 aa18.64■□□□□ 0.57
CCDC7-203ENST00000362006 SLC11A2P49281 568 aa18.64■□□□□ 0.57
CCDC7-203ENST00000362006 LMNB2Q03252 620 aa18.64■□□□□ 0.57
CCDC7-203ENST00000362006 DHX34Q14147 1143 aaKnown RBP18.64■□□□□ 0.57
CCDC7-203ENST00000362006 TXNDC8Q6A555 127 aa18.64■□□□□ 0.57
CCDC7-203ENST00000362006 P3H4Q92791 437 aa18.64■□□□□ 0.57
CCDC7-203ENST00000362006 SIK2Q9H0K1 926 aa18.64■□□□□ 0.57
CCDC7-203ENST00000362006 PIDD1Q9HB75 910 aa18.64■□□□□ 0.57
CCDC7-203ENST00000362006 CHD9Q3L8U1 2897 aa18.64■□□□□ 0.57
CCDC7-203ENST00000362006 A0A1W2PRU2 124 aa18.64■□□□□ 0.57
CCDC7-203ENST00000362006 HMBSP08397 361 aa18.64■□□□□ 0.57
CCDC7-203ENST00000362006 DYNLT1P63172 113 aa18.64■□□□□ 0.57
CCDC7-203ENST00000362006 SLC7A9P82251 487 aa18.64■□□□□ 0.57
CCDC7-203ENST00000362006 DPYSQ14117 519 aa18.64■□□□□ 0.57
CCDC7-203ENST00000362006 CCDC137Q6PK04 289 aaKnown RBP18.64■□□□□ 0.57
CCDC7-203ENST00000362006 LRRC31Q6UY01 552 aa18.64■□□□□ 0.57
CCDC7-203ENST00000362006 GPR161Q8N6U8 529 aaKnown RBP18.64■□□□□ 0.57
CCDC7-203ENST00000362006 PLD5Q8N7P1 536 aa18.64■□□□□ 0.57
CCDC7-203ENST00000362006 GRK7Q8WTQ7 553 aa18.64■□□□□ 0.57
CCDC7-203ENST00000362006 C1orf54Q8WWF1 131 aa18.64■□□□□ 0.57
CCDC7-203ENST00000362006 ZNF707Q96C28 371 aaPredicted RBP18.64■□□□□ 0.57
CCDC7-203ENST00000362006 ARHGEF4Q9NR80 690 aa18.64■□□□□ 0.57
CCDC7-203ENST00000362006 HCFC1R1Q9NWW0 138 aa18.64■□□□□ 0.57
CCDC7-203ENST00000362006 DONSONQ9NYP3 566 aa18.64■□□□□ 0.57
CCDC7-203ENST00000362006 DRG1Q9Y295 367 aaKnown RBP18.64■□□□□ 0.57
CCDC7-203ENST00000362006 HS3ST4Q9Y661 456 aa18.64■□□□□ 0.57
CCDC7-203ENST00000362006 FAM72CH0Y354 149 aa18.63■□□□□ 0.57
CCDC7-203ENST00000362006 FGF10O15520 208 aaPredicted RBP18.63■□□□□ 0.57
CCDC7-203ENST00000362006 LRIG2O94898 1065 aa18.63■□□□□ 0.57
CCDC7-203ENST00000362006 LATS1O95835 1130 aa18.63■□□□□ 0.57
CCDC7-203ENST00000362006 AMPD1P23109 780 aa18.63■□□□□ 0.57
CCDC7-203ENST00000362006 CYP4F8P98187 520 aa18.63■□□□□ 0.57
CCDC7-203ENST00000362006 ERCC6LQ2NKX8 1250 aa18.63■□□□□ 0.57
CCDC7-203ENST00000362006 FAM72AQ5TYM5 149 aa18.63■□□□□ 0.57
CCDC7-203ENST00000362006 FAM72DQ6L9T8 149 aa18.63■□□□□ 0.57
CCDC7-203ENST00000362006 FAM72BQ86X60 149 aa18.63■□□□□ 0.57
CCDC7-203ENST00000362006 EFHBQ8N7U6 833 aa18.63■□□□□ 0.57
CCDC7-203ENST00000362006 ARL14EPQ8N8R7 260 aaPredicted RBP18.63■□□□□ 0.57
CCDC7-203ENST00000362006 ATL2Q8NHH9 583 aa18.63■□□□□ 0.57
CCDC7-203ENST00000362006 TBC1D31Q96DN5 1066 aa18.63■□□□□ 0.57
CCDC7-203ENST00000362006 DDX50Q9BQ39 737 aaKnown RBP18.63■□□□□ 0.57
CCDC7-203ENST00000362006 CATSPERBQ9H7T0 1116 aa18.63■□□□□ 0.57
CCDC7-203ENST00000362006 R3HDM2Q9Y2K5 976 aaKnown RBP18.63■□□□□ 0.57
CCDC7-203ENST00000362006 MYO9BQ13459 2157 aa18.63■□□□□ 0.57
CCDC7-203ENST00000362006 TARSL2A2RTX5 802 aaKnown RBP18.62■□□□□ 0.57
CCDC7-203ENST00000362006 STC2O76061 302 aa18.62■□□□□ 0.57
CCDC7-203ENST00000362006 TUBBP07437 444 aa18.62■□□□□ 0.57
CCDC7-203ENST00000362006 HOXC13P31276 330 aa18.62■□□□□ 0.57
CCDC7-203ENST00000362006 MS4A13Q5J8X5 152 aa18.62■□□□□ 0.57
CCDC7-203ENST00000362006 ZNF697Q5TEC3 545 aa18.62■□□□□ 0.57
CCDC7-203ENST00000362006 MANEALQ5VSG8 457 aa18.62■□□□□ 0.57
CCDC7-203ENST00000362006 CCDC105Q8IYK2 499 aa18.62■□□□□ 0.57
CCDC7-203ENST00000362006 MAB21L3Q8N8X9 362 aa18.62■□□□□ 0.57
CCDC7-203ENST00000362006 SHKBP1Q8TBC3 707 aa18.62■□□□□ 0.57
CCDC7-203ENST00000362006 ACTL9Q8TC94 416 aa18.62■□□□□ 0.57
CCDC7-203ENST00000362006 SMG7Q92540 1137 aaKnown RBP18.62■□□□□ 0.57
CCDC7-203ENST00000362006 SLCO2A1Q92959 643 aa18.62■□□□□ 0.57
CCDC7-203ENST00000362006 NKD2Q969F2 451 aaPredicted RBP18.62■□□□□ 0.57
CCDC7-203ENST00000362006 LRRC1Q9BTT6 524 aa18.62■□□□□ 0.57
CCDC7-203ENST00000362006 TASP1Q9H6P5 420 aa18.62■□□□□ 0.57
CCDC7-203ENST00000362006 PPARGC1AQ9UBK2 798 aaKnown RBP18.62■□□□□ 0.57
CCDC7-203ENST00000362006 RAD54BQ9Y620 910 aa18.62■□□□□ 0.57
CCDC7-203ENST00000362006 FAM187AA6NFU0 413 aa18.62■□□□□ 0.57
CCDC7-203ENST00000362006 LIASO43766 372 aa18.62■□□□□ 0.57
CCDC7-203ENST00000362006 ACSL4O60488 711 aa18.62■□□□□ 0.57
CCDC7-203ENST00000362006 EPHB2P29323 1055 aa18.62■□□□□ 0.57
CCDC7-203ENST00000362006 KCNQ1P51787 676 aa18.62■□□□□ 0.57
CCDC7-203ENST00000362006 OTUD4Q01804 1114 aaKnown RBP18.62■□□□□ 0.57
CCDC7-203ENST00000362006 BYSLQ13895 437 aaKnown RBP18.62■□□□□ 0.57
CCDC7-203ENST00000362006 PIK3R6Q5UE93 754 aa18.62■□□□□ 0.57
CCDC7-203ENST00000362006 SLC35B2Q8TB61 432 aa18.62■□□□□ 0.57
CCDC7-203ENST00000362006 RUBCNQ92622 972 aa18.62■□□□□ 0.57
CCDC7-203ENST00000362006 RETREG1Q9H6L5 497 aa18.62■□□□□ 0.57
CCDC7-203ENST00000362006 LAMA2P24043 3122 aaKnown RBP18.62■□□□□ 0.57
CCDC7-203ENST00000362006 UQCRHLA0A096LP55 91 aa18.61■□□□□ 0.57
CCDC7-203ENST00000362006 E9PAM4 449 aa18.61■□□□□ 0.57
CCDC7-203ENST00000362006 MCF2LO15068 1137 aa18.61■□□□□ 0.57
CCDC7-203ENST00000362006 DCLK1O15075 740 aa18.61■□□□□ 0.57
CCDC7-203ENST00000362006 CKMP06732 381 aa18.61■□□□□ 0.57
CCDC7-203ENST00000362006 UQCRHP07919 91 aa18.61■□□□□ 0.57
CCDC7-203ENST00000362006 ERCC2P18074 760 aa18.61■□□□□ 0.57
CCDC7-203ENST00000362006 DR1Q01658 176 aa18.61■□□□□ 0.57
CCDC7-203ENST00000362006 PAFAH1B3Q15102 231 aaKnown RBP18.61■□□□□ 0.57
CCDC7-203ENST00000362006 NOMO1Q15155 1222 aa18.61■□□□□ 0.57
CCDC7-203ENST00000362006 PRSS36Q5K4E3 855 aa18.61■□□□□ 0.57
CCDC7-203ENST00000362006 GPR158Q5T848 1215 aa18.61■□□□□ 0.57
CCDC7-203ENST00000362006 TMCO3Q6UWJ1 677 aa18.61■□□□□ 0.57
CCDC7-203ENST00000362006 SYDE1Q6ZW31 735 aaPredicted RBP18.61■□□□□ 0.57
CCDC7-203ENST00000362006 GRASPQ7Z6J2 395 aaPredicted RBP18.61■□□□□ 0.57
CCDC7-203ENST00000362006 DDX42Q86XP3 938 aaKnown RBP eCLIP18.61■□□□□ 0.57
CCDC7-203ENST00000362006 ATG4AQ8WYN0 398 aa18.61■□□□□ 0.57
CCDC7-203ENST00000362006 CYP2S1Q96SQ9 504 aa18.61■□□□□ 0.57
CCDC7-203ENST00000362006 IGFLR1Q9H665 355 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms