RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 TRAPPC9Q96Q05 1148 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 ECSITQ9BQ95 431 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 NGRNQ9NPE2 291 aaKnown RBP9.38□□□□□ -0.91
TOP1-201ENST00000361337 STARD7Q9NQZ5 370 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 LOC100653049A0A140TA62 436 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 A6NJR5 290 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 HNRNPCL1O60812 293 aaKnown RBP9.38□□□□□ -0.91
TOP1-201ENST00000361337 STAM2O75886 525 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 KRT34O76011 436 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 TOMM70O94826 608 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 OR6B1O95007 311 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 LYPLA2O95372 231 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 CPT1AP50416 773 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 EFNA5P52803 228 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 YWHAGP61981 247 aaKnown RBP eCLIP9.38□□□□□ -0.91
TOP1-201ENST00000361337 PRAMEP78395 509 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 PDE1BQ01064 536 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 C1QBPQ07021 282 aaKnown RBP9.38□□□□□ -0.91
TOP1-201ENST00000361337 PEX6Q13608 980 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 TBC1D25Q3MII6 688 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 DNAJC24Q6P3W2 148 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 HEATR4Q86WZ0 1026 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 POU5F2Q8N7G0 328 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 AGR3Q8TD06 166 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 TFAP2BQ92481 460 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 ATP11BQ9Y2G3 1177 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 RBM47A0AV96 593 aaKnown RBP9.38□□□□□ -0.91
TOP1-201ENST00000361337 A8MXQ7 604 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 TRIM49D1C9J1S8 452 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 SOCS7O14512 581 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 TOM1L1O75674 476 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 LDHAP00338 332 aaKnown RBP9.38□□□□□ -0.91
TOP1-201ENST00000361337 NCF2P19878 526 aaPredicted RBP9.38□□□□□ -0.91
TOP1-201ENST00000361337 PHBP35232 272 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 NAMPTP43490 491 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 RAP1GDS1P52306 607 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 AQP5P55064 265 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 TPD52P55327 224 aaPredicted RBP9.38□□□□□ -0.91
TOP1-201ENST00000361337 SLC25A3Q00325 362 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 MMRN1Q13201 1228 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 RALGPS1Q5JS13 557 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 BSPRYQ5W0U4 402 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 ANKRD23Q86SG2 305 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 NUDCD3Q8IVD9 361 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 TMEM192Q8IY95 271 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 KIAA2013Q8IYS2 634 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 CFAP36Q96G28 342 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 MS4A4AQ96JQ5 239 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 C2orf40Q9H1Z8 148 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 SNX25Q9H3E2 840 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 PLAC1Q9HBJ0 212 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 VTA1Q9NP79 307 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 POLIQ9UNA4 740 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 ZNF232Q9UNY5 417 aa9.38□□□□□ -0.91
TOP1-201ENST00000361337 LOXHD1Q8IVV2 1947 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 E7ESA3 106 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 BUD23O43709 281 aaKnown RBP9.37□□□□□ -0.91
TOP1-201ENST00000361337 PEX1O43933 1283 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 B3GAT3O94766 335 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 GSTA2P09210 222 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 SMIM10L2AP0DMW4 78 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 SMIM10L2BP0DMW5 78 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 FUT4P22083 530 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 ACAT1P24752 427 aaKnown RBP9.37□□□□□ -0.91
TOP1-201ENST00000361337 MAGEA10P43363 369 aaPredicted RBP9.37□□□□□ -0.91
TOP1-201ENST00000361337 TUFMP49411 452 aaKnown RBP9.37□□□□□ -0.91
TOP1-201ENST00000361337 PSEN2P49810 448 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 MAP3K10Q02779 954 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 ASPHQ12797 758 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 KLHL38Q2WGJ6 581 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 SFT2D3Q587I9 215 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 RNF180Q86T96 592 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 CCDC33Q8N5R6 958 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 CNBD2Q96M20 576 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 SPATA16Q9BXB7 569 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 DRC3Q9H069 523 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 MINDY3Q9H8M7 445 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 SMYD2Q9NRG4 433 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 DDX43Q9NXZ2 648 aaKnown RBP9.37□□□□□ -0.91
TOP1-201ENST00000361337 PACSIN3Q9UKS6 424 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 SNAI1O95863 264 aaPredicted RBP9.37□□□□□ -0.91
TOP1-201ENST00000361337 C1QAP02745 245 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 BPIFB4P59827 614 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 ACTR3P61158 418 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 SNRPFP62306 86 aaKnown RBP9.37□□□□□ -0.91
TOP1-201ENST00000361337 FKBP1BP68106 108 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 TMPRSS15P98073 1019 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 DSG1Q02413 1049 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 SLC18A2Q05940 514 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 CHI3L2Q15782 390 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 KIAA1841Q6NSI8 718 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 ATG14Q6ZNE5 492 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 NIPA1Q7RTP0 329 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 CHSY1Q86X52 802 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 PPM1NQ8N819 430 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 SLC44A1Q8WWI5 657 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 RSAD2Q8WXG1 361 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 PPP1R36Q96LQ0 422 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 OLFM3Q96PB7 478 aa9.37□□□□□ -0.91
TOP1-201ENST00000361337 NACA2Q9H009 215 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms