RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 DNAJB4Q9UDY4 337 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 DDTLA6NHG4 134 aaPredicted RBP16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 FAM155BO75949 473 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 PDGFRBP09619 1106 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 HSD17B4P51659 736 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 NAGLUP54802 743 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 RBBP7Q16576 425 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 DALRD3Q5D0E6 543 aaKnown RBP16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 AGAP9Q5VTM2 703 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 GPR107Q5VW38 600 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 ERO1BQ86YB8 467 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 FAM49AQ9H0Q0 323 aaPredicted RBP16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 HMG20AQ9NP66 347 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 SARS2Q9NP81 518 aaKnown RBP16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 GGA3Q9NZ52 723 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 CPSF3Q9UKF6 684 aaKnown RBP16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 PPM1HQ9ULR3 514 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 RAB26Q9ULW5 256 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 AP4E1Q9UPM8 1137 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 IL18RAPO95256 599 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 GABRB2P47870 512 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 LAMC2Q13753 1193 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 RALGPS1Q5JS13 557 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 FNBP1LQ5T0N5 605 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 TMEM63BQ5T3F8 832 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 C6orf52Q5T4I8 152 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 RP9Q8TA86 221 aaKnown RBP16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 CCDC126Q96EE4 140 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 MAGED4Q96JG8 741 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 FAM84AQ96KN4 292 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 CSADQ9Y600 493 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 HMGCRP04035 888 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 ADRA2BP18089 450 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 PGAM1P18669 254 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 HADHAP40939 763 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 ABL2P42684 1182 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 NAMPTP43490 491 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 ACMSDQ8TDX5 336 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 NKD2Q969F2 451 aaPredicted RBP16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.36■□□□□ 0.213e-6■■■■■ 50
CLSTN1-201ENST00000361311 SLC4A9Q96Q91 983 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 SEPHS2Q99611 448 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 WDR18Q9BV38 432 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 RPAP3Q9H6T3 665 aaPredicted RBP16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 ZNF180Q9UJW8 692 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 MTSS1O43312 755 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 SIN3BO75182 1162 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 CHRNB2P17787 502 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 KLF10Q13118 480 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 STRIP1Q5VSL9 837 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 WDR49Q8IV35 697 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 FNIP1Q8TF40 1166 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 ULK4Q96C45 1275 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 FAM163AQ96GL9 167 aaPredicted RBP16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 ADAM7Q9H2U9 754 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 NOCTQ9UK39 431 aaKnown RBP16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 SPEF2Q9C093 1822 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 SPATA31A1Q5TZJ5 1347 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 PPP1R11O60927 126 aaPredicted RBP16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 ICAM1P05362 532 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 CCR3P51677 355 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 SLC18A1P54219 525 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 MMRN1Q13201 1228 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 NFYCQ13952 458 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 TRAF7Q6Q0C0 670 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 MARK4Q96L34 752 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 CPNE1Q99829 537 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 NOL6Q9H6R4 1146 aaKnown RBP16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 RHBDL3P58872 404 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 PSME3P61289 254 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 CRADDP78560 199 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 PTP4A2Q12974 167 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 PERM1Q5SV97 790 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 ANKRD22Q5VYY1 191 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 KCNT2Q6UVM3 1135 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 FAM47BQ8NA70 645 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 IFT43Q96FT9 208 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 POLLQ9UGP5 575 aa16.36■□□□□ 0.21
CLSTN1-201ENST00000361311 TNS2Q63HR2 1409 aa16.35■□□□□ 0.21
CLSTN1-201ENST00000361311 TRIM38O00635 465 aa16.35■□□□□ 0.21
CLSTN1-201ENST00000361311 LDLRP01130 860 aa16.35■□□□□ 0.21
CLSTN1-201ENST00000361311 PIK3R1P27986 724 aa16.35■□□□□ 0.21
CLSTN1-201ENST00000361311 INAQ16352 499 aa16.35■□□□□ 0.21
CLSTN1-201ENST00000361311 ASRGL1Q7L266 308 aa16.35■□□□□ 0.21
CLSTN1-201ENST00000361311 LRRC71Q8N4P6 559 aa16.35■□□□□ 0.21
CLSTN1-201ENST00000361311 CALML6Q8TD86 181 aa16.35■□□□□ 0.21
CLSTN1-201ENST00000361311 KCNQ5Q9NR82 932 aa16.35■□□□□ 0.21
CLSTN1-201ENST00000361311 POMPQ9Y244 141 aa16.35■□□□□ 0.21
CLSTN1-201ENST00000361311 PCDHA2Q9Y5H9 948 aa16.35■□□□□ 0.21
CLSTN1-201ENST00000361311 HDAC3O15379 428 aa16.35■□□□□ 0.21
CLSTN1-201ENST00000361311 CSDE1O75534 798 aaKnown RBP16.35■□□□□ 0.21
CLSTN1-201ENST00000361311 ERVK-10P10266 1014 aa16.35■□□□□ 0.21
CLSTN1-201ENST00000361311 EPHA3P29320 983 aa16.35■□□□□ 0.21
CLSTN1-201ENST00000361311 CA8P35219 290 aa16.35■□□□□ 0.21
CLSTN1-201ENST00000361311 ABCG1P45844 678 aa16.35■□□□□ 0.21
CLSTN1-201ENST00000361311 ANGPTL8Q6UXH0 198 aa16.35■□□□□ 0.21
CLSTN1-201ENST00000361311 C10orf107Q8IVU9 208 aa16.35■□□□□ 0.21
CLSTN1-201ENST00000361311 RTKNQ9BST9 563 aa16.35■□□□□ 0.21
CLSTN1-201ENST00000361311 VAV3Q9UKW4 847 aa16.35■□□□□ 0.21
CLSTN1-201ENST00000361311 VANGL2Q9ULK5 521 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms