RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 YKT6O15498 198 aa14.47□□□□□ -0.09
VPS29-201ENST00000360579 CUTAO60888 179 aa14.47□□□□□ -0.09
VPS29-201ENST00000360579 ZIC2O95409 532 aaPredicted RBP14.47□□□□□ -0.09
VPS29-201ENST00000360579 HLA-DRAP01903 254 aa14.47□□□□□ -0.09
VPS29-201ENST00000360579 EIF2S3P41091 472 aaKnown RBP14.47□□□□□ -0.09
VPS29-201ENST00000360579 SLC8A3P57103 927 aa14.47□□□□□ -0.09
VPS29-201ENST00000360579 RPS14P62263 151 aaKnown RBP14.47□□□□□ -0.09
VPS29-201ENST00000360579 DLG4P78352 724 aa14.47□□□□□ -0.09
VPS29-201ENST00000360579 PDAP1Q13442 181 aaKnown RBP14.47□□□□□ -0.09
VPS29-201ENST00000360579 AHI1Q8N157 1196 aa14.47□□□□□ -0.09
VPS29-201ENST00000360579 CCDC150Q8NCX0 1101 aa14.47□□□□□ -0.09
VPS29-201ENST00000360579 BAP1Q92560 729 aa14.47□□□□□ -0.09
VPS29-201ENST00000360579 ZNF396Q96N95 335 aaPredicted RBP14.47□□□□□ -0.09
VPS29-201ENST00000360579 UBXN6Q9BZV1 441 aa14.47□□□□□ -0.09
VPS29-201ENST00000360579 NIF3L1Q9GZT8 377 aa14.47□□□□□ -0.09
VPS29-201ENST00000360579 BLZF1Q9H2G9 400 aa14.47□□□□□ -0.09
VPS29-201ENST00000360579 PRORYQ9H606 182 aa14.47□□□□□ -0.09
VPS29-201ENST00000360579 SUN2Q9UH99 717 aa14.47□□□□□ -0.09
VPS29-201ENST00000360579 SCML1Q9UN30 329 aa14.47□□□□□ -0.09
VPS29-201ENST00000360579 MTMR6Q9Y217 621 aa14.47□□□□□ -0.09
VPS29-201ENST00000360579 NCKAP1Q9Y2A7 1128 aa14.47□□□□□ -0.09
VPS29-201ENST00000360579 FRMD4BQ9Y2L6 1034 aa14.47□□□□□ -0.09
VPS29-201ENST00000360579 ENC1O14682 589 aa14.46□□□□□ -0.09
VPS29-201ENST00000360579 CAPN9O14815 690 aa14.46□□□□□ -0.09
VPS29-201ENST00000360579 POLR2DO15514 142 aaKnown RBP14.46□□□□□ -0.09
VPS29-201ENST00000360579 RFPL3O75679 317 aa14.46□□□□□ -0.09
VPS29-201ENST00000360579 ATP5BP06576 529 aaKnown RBP14.46□□□□□ -0.09
VPS29-201ENST00000360579 CD58P19256 250 aa14.46□□□□□ -0.09
VPS29-201ENST00000360579 ABCB4P21439 1286 aa14.46□□□□□ -0.09
VPS29-201ENST00000360579 HOXD9P28356 352 aaPredicted RBP14.46□□□□□ -0.09
VPS29-201ENST00000360579 HLA-FP30511 346 aa14.46□□□□□ -0.09
VPS29-201ENST00000360579 YWHAGP61981 247 aaKnown RBP eCLIP14.46□□□□□ -0.09
VPS29-201ENST00000360579 IL9RQ01113 521 aa14.46□□□□□ -0.09
VPS29-201ENST00000360579 PPP1R26Q5T8A7 1209 aaPredicted RBP14.46□□□□□ -0.09
VPS29-201ENST00000360579 ZNF776Q68DI1 518 aaPredicted RBP14.46□□□□□ -0.09
VPS29-201ENST00000360579 SHC4Q6S5L8 630 aa14.46□□□□□ -0.09
VPS29-201ENST00000360579 LAYNQ6UX15 382 aa14.46□□□□□ -0.09
VPS29-201ENST00000360579 USP30Q70CQ3 517 aa14.46□□□□□ -0.09
VPS29-201ENST00000360579 CHST9Q7L1S5 443 aa14.46□□□□□ -0.09
VPS29-201ENST00000360579 TTC39CQ8N584 583 aa14.46□□□□□ -0.09
VPS29-201ENST00000360579 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.46□□□□□ -0.09
VPS29-201ENST00000360579 ZNF557Q8N988 423 aaPredicted RBP14.46□□□□□ -0.09
VPS29-201ENST00000360579 ELF4Q99607 663 aaPredicted RBP14.46□□□□□ -0.09
VPS29-201ENST00000360579 ARID3AQ99856 593 aa14.46□□□□□ -0.09
VPS29-201ENST00000360579 NRSN2Q9GZP1 204 aa14.46□□□□□ -0.09
VPS29-201ENST00000360579 PRSS16Q9NQE7 514 aa14.46□□□□□ -0.09
VPS29-201ENST00000360579 OLA1Q9NTK5 396 aaKnown RBP14.46□□□□□ -0.09
VPS29-201ENST00000360579 AK5Q9Y6K8 562 aa14.46□□□□□ -0.09
VPS29-201ENST00000360579 MYH10P35580 1976 aa14.45□□□□□ -0.1
VPS29-201ENST00000360579 A0A1W2PPC4 97 aa14.45□□□□□ -0.1
VPS29-201ENST00000360579 CAPN8A6NHC0 703 aa14.45□□□□□ -0.1
VPS29-201ENST00000360579 PDXKO00764 312 aa14.45□□□□□ -0.1
VPS29-201ENST00000360579 YEATS4O95619 227 aa14.45□□□□□ -0.1
VPS29-201ENST00000360579 LDOC1O95751 146 aaPredicted RBP14.45□□□□□ -0.1
VPS29-201ENST00000360579 LATS1O95835 1130 aa14.45□□□□□ -0.1
VPS29-201ENST00000360579 NR3C1P04150 777 aa14.45□□□□□ -0.1
VPS29-201ENST00000360579 PRB1P04280 392 aa14.45□□□□□ -0.1
VPS29-201ENST00000360579 ITGAVP06756 1048 aa14.45□□□□□ -0.1
VPS29-201ENST00000360579 DLDP09622 509 aaKnown RBP14.45□□□□□ -0.1
VPS29-201ENST00000360579 SLFN14P0C7P3 912 aa14.45□□□□□ -0.1
VPS29-201ENST00000360579 ITPKBP27987 946 aa14.45□□□□□ -0.1
VPS29-201ENST00000360579 CASP1P29466 404 aa14.45□□□□□ -0.1
VPS29-201ENST00000360579 SEMG2Q02383 582 aa14.45□□□□□ -0.1
VPS29-201ENST00000360579 CUL4BQ13620 913 aa14.45□□□□□ -0.1
VPS29-201ENST00000360579 TRIP4Q15650 581 aaPredicted RBP14.45□□□□□ -0.1
VPS29-201ENST00000360579 RAB41Q5JT25 222 aa14.45□□□□□ -0.1
VPS29-201ENST00000360579 KIAA0895LQ68EN5 471 aa14.45□□□□□ -0.1
VPS29-201ENST00000360579 CYB5D2Q8WUJ1 264 aa14.45□□□□□ -0.1
VPS29-201ENST00000360579 TMA16Q96EY4 203 aaKnown RBP14.45□□□□□ -0.1
VPS29-201ENST00000360579 INTS4Q96HW7 963 aaKnown RBP14.45□□□□□ -0.1
VPS29-201ENST00000360579 CNDP2Q96KP4 475 aaKnown RBP14.45□□□□□ -0.1
VPS29-201ENST00000360579 HEXIM2Q96MH2 286 aaKnown RBP14.45□□□□□ -0.1
VPS29-201ENST00000360579 ORAI3Q9BRQ5 295 aa14.45□□□□□ -0.1
VPS29-201ENST00000360579 IRX2Q9BZI1 471 aaPredicted RBP14.45□□□□□ -0.1
VPS29-201ENST00000360579 ABCB8Q9NUT2 735 aa14.45□□□□□ -0.1
VPS29-201ENST00000360579 FAM13BQ9NYF5 915 aa14.45□□□□□ -0.1
VPS29-201ENST00000360579 GGA2Q9UJY4 613 aa14.45□□□□□ -0.1
VPS29-201ENST00000360579 STOML2Q9UJZ1 356 aa14.45□□□□□ -0.1
VPS29-201ENST00000360579 HBS1LQ9Y450 684 aaKnown RBP14.45□□□□□ -0.1
VPS29-201ENST00000360579 CFAP46Q8IYW2 2715 aa14.44□□□□□ -0.1
VPS29-201ENST00000360579 KNTC1P50748 2209 aa14.44□□□□□ -0.1
VPS29-201ENST00000360579 TEX51A0A1B0GUA7 166 aa14.44□□□□□ -0.1
VPS29-201ENST00000360579 MAPK13O15264 365 aa14.44□□□□□ -0.1
VPS29-201ENST00000360579 RNASEH1O60930 286 aaKnown RBP14.44□□□□□ -0.1
VPS29-201ENST00000360579 C1QL1O75973 258 aa14.44□□□□□ -0.1
VPS29-201ENST00000360579 IGHV4-34P06331 123 aa14.44□□□□□ -0.1
VPS29-201ENST00000360579 PABPC1P11940 636 aaKnown RBP14.44□□□□□ -0.1
VPS29-201ENST00000360579 ARRB1P49407 418 aaPredicted RBP14.44□□□□□ -0.1
VPS29-201ENST00000360579 VAMP7P51809 220 aa14.44□□□□□ -0.1
VPS29-201ENST00000360579 RTP5Q14D33 572 aa14.44□□□□□ -0.1
VPS29-201ENST00000360579 KCNT1Q5JUK3 1230 aa14.44□□□□□ -0.1
VPS29-201ENST00000360579 ADGRF1Q5T601 910 aa14.44□□□□□ -0.1
VPS29-201ENST00000360579 CEP135Q66GS9 1140 aa14.44□□□□□ -0.1
VPS29-201ENST00000360579 MBLAC2Q68D91 279 aa14.44□□□□□ -0.1
VPS29-201ENST00000360579 KIAA0907Q7Z7F0 614 aaPredicted RBP14.44□□□□□ -0.1
VPS29-201ENST00000360579 ZNF605Q86T29 641 aa14.44□□□□□ -0.1
VPS29-201ENST00000360579 ADIPOR2Q86V24 386 aa14.44□□□□□ -0.1
VPS29-201ENST00000360579 PIGZQ86VD9 579 aa14.44□□□□□ -0.1
VPS29-201ENST00000360579 ZNF366Q8N895 744 aa14.44□□□□□ -0.1
VPS29-201ENST00000360579 SNIP1Q8TAD8 396 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms