RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.75■□□□□ 0.27
SCAF1-201ENST00000360565 SLIT2O94813 1529 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 LTFP02788 710 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 ERBB2P04626 1255 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 BIRC2Q13490 618 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 TCHHL1Q5QJ38 904 aaPredicted RBP16.75■□□□□ 0.27
SCAF1-201ENST00000360565 PPP1R26Q5T8A7 1209 aaPredicted RBP16.75■□□□□ 0.27
SCAF1-201ENST00000360565 WSCD1Q658N2 575 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 OVOS1Q6IE37 1185 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 PHF21BQ96EK2 531 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 CNDP1Q96KN2 507 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 SENP8Q96LD8 212 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 GPR63Q9BZJ6 419 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 GID8Q9NWU2 228 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 STX18Q9P2W9 335 aaKnown RBP16.75■□□□□ 0.27
SCAF1-201ENST00000360565 C2CD2Q9Y426 696 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 B4GALT4O60513 344 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 H2AFYO75367 372 aaKnown RBP16.74■□□□□ 0.27
SCAF1-201ENST00000360565 DDHD2O94830 711 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 CCR1P32246 355 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 HARS2P49590 506 aaKnown RBP16.74■□□□□ 0.27
SCAF1-201ENST00000360565 PREPLQ4J6C6 727 aaPredicted RBP16.74■□□□□ 0.27
SCAF1-201ENST00000360565 TLK2Q86UE8 772 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 PIWIL2Q8TC59 973 aaKnown RBP16.74■□□□□ 0.27
SCAF1-201ENST00000360565 RAET1EQ8TD07 263 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 CCDC126Q96EE4 140 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 TMEM109Q9BVC6 243 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 B3GNT5Q9BYG0 378 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 GBA2Q9HCG7 927 aaPredicted RBP16.74■□□□□ 0.27
SCAF1-201ENST00000360565 FBXO6Q9NRD1 293 aaPredicted RBP16.74■□□□□ 0.27
SCAF1-201ENST00000360565 NUDT5Q9UKK9 219 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 TPP1O14773 563 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 PHGDHO43175 533 aaKnown RBP16.74■□□□□ 0.27
SCAF1-201ENST00000360565 PROCP04070 461 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 HOXD10P28358 340 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 CDKN2BP42772 138 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 PARP6Q2NL67 630 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 NKD2Q969F2 451 aaPredicted RBP16.74■□□□□ 0.27
SCAF1-201ENST00000360565 HSFY1Q96LI6 401 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 CATSPER2Q96P56 530 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 GOT1P17174 413 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 MFSD10Q14728 455 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 SLC1A5Q15758 541 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 CCDC153Q494R4 210 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 C12orf50Q8NA57 414 aaPredicted RBP16.74■□□□□ 0.27
SCAF1-201ENST00000360565 CYGBQ8WWM9 190 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 USP13Q92995 863 aaPredicted RBP16.74■□□□□ 0.27
SCAF1-201ENST00000360565 CNBD2Q96M20 576 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 GLT1D1Q96MS3 346 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 CPNE1Q99829 537 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 ZBED2Q9BTP6 218 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 CAAP1Q9H8G2 361 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 PKP3Q9Y446 797 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 SLCO1B7G3V0H7 640 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 XPO1O14980 1071 aaKnown RBP16.74■□□□□ 0.27
SCAF1-201ENST00000360565 MGEA5O60502 916 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 ARL2P36404 184 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 CD151P48509 253 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 KCNK10P57789 538 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 PTK2BQ14289 1009 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 SPANXN3Q5MJ09 141 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 ZNF470Q6ECI4 717 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 CRELD2Q6UXH1 353 aaPredicted RBP16.74■□□□□ 0.27
SCAF1-201ENST00000360565 LBX2Q6XYB7 198 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 KYQ8NBH2 561 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 EBNA1BP2Q99848 306 aaKnown RBP16.74■□□□□ 0.27
SCAF1-201ENST00000360565 SH3GL3Q99963 347 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 TKTL2Q9H0I9 626 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 LHX5Q9H2C1 402 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 CASS4Q9NQ75 786 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 XPNPEP3Q9NQH7 507 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 ZDHHC18Q9NUE0 388 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 TRHDEQ9UKU6 1024 aa16.74■□□□□ 0.27
SCAF1-201ENST00000360565 CYP1A1P04798 512 aaPredicted RBP16.73■□□□□ 0.27
SCAF1-201ENST00000360565 PTPN1P18031 435 aaKnown RBP16.73■□□□□ 0.27
SCAF1-201ENST00000360565 PRKAA1Q13131 559 aa16.73■□□□□ 0.27
SCAF1-201ENST00000360565 AGKQ53H12 422 aa16.73■□□□□ 0.27
SCAF1-201ENST00000360565 SGO1Q5FBB7 561 aa16.73■□□□□ 0.27
SCAF1-201ENST00000360565 LRRC74BQ6ZQY2 392 aa16.73■□□□□ 0.27
SCAF1-201ENST00000360565 ANKRD52Q8NB46 1076 aa16.73■□□□□ 0.27
SCAF1-201ENST00000360565 TFAP2BQ92481 460 aa16.73■□□□□ 0.27
SCAF1-201ENST00000360565 CCT7Q99832 543 aa16.73■□□□□ 0.27
SCAF1-201ENST00000360565 DDX50Q9BQ39 737 aaKnown RBP16.73■□□□□ 0.27
SCAF1-201ENST00000360565 ZNF670Q9BS34 389 aa16.73■□□□□ 0.27
SCAF1-201ENST00000360565 NMRAL1Q9HBL8 299 aa16.73■□□□□ 0.27
SCAF1-201ENST00000360565 TMEM59LQ9UK28 342 aa16.73■□□□□ 0.27
SCAF1-201ENST00000360565 LRCH1Q9Y2L9 728 aa16.73■□□□□ 0.27
SCAF1-201ENST00000360565 GRIN2DO15399 1336 aa16.73■□□□□ 0.27
SCAF1-201ENST00000360565 UNGP13051 313 aaPredicted RBP16.73■□□□□ 0.27
SCAF1-201ENST00000360565 NNMTP40261 264 aa16.73■□□□□ 0.27
SCAF1-201ENST00000360565 ILDR2Q71H61 639 aa16.73■□□□□ 0.27
SCAF1-201ENST00000360565 MECRQ9BV79 373 aa16.73■□□□□ 0.27
SCAF1-201ENST00000360565 C12orf65Q9H3J6 166 aaKnown RBP16.73■□□□□ 0.27
SCAF1-201ENST00000360565 SNX13Q9Y5W8 968 aa16.73■□□□□ 0.27
SCAF1-201ENST00000360565 SETD1AO15047 1707 aaKnown RBP16.73■□□□□ 0.27
SCAF1-201ENST00000360565 DHX15O43143 795 aaKnown RBP16.73■□□□□ 0.27
SCAF1-201ENST00000360565 PLIN5Q00G26 463 aa16.73■□□□□ 0.27
SCAF1-201ENST00000360565 MARC1Q5VT66 337 aa16.73■□□□□ 0.27
SCAF1-201ENST00000360565 CLEC4FQ8N1N0 589 aa16.73■□□□□ 0.27
SCAF1-201ENST00000360565 FAR2Q96K12 515 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms