RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 PGBD2Q6P3X8 592 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 MINDY2Q8NBR6 621 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 PNKPQ96T60 521 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 PLGRKTQ9HBL7 147 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 GPN1Q9HCN4 374 aaPredicted RBP9.5□□□□□ -0.89
VPS13A-203ENST00000360280 ATPIF1Q9UII2 106 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 LIN7AO14910 233 aaPredicted RBP9.5□□□□□ -0.89
VPS13A-203ENST00000360280 GPR15P49685 360 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 NRG3P56975 720 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 DCP1BQ8IZD4 617 aaKnown RBP9.5□□□□□ -0.89
VPS13A-203ENST00000360280 GYPCP04921 128 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 GPSM2P81274 684 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 GALNT3Q14435 633 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 C2orf69Q8N8R5 385 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 SH3RF3Q8TEJ3 882 aaPredicted RBP9.5□□□□□ -0.89
VPS13A-203ENST00000360280 ZSWIM1Q9BR11 485 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 MKNK1Q9BUB5 465 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 PIF1Q9H611 641 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 PRDM8Q9NQV8 689 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 CROTQ9UKG9 612 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 ATMINO43313 823 aaPredicted RBP9.5□□□□□ -0.89
VPS13A-203ENST00000360280 OR6A2O95222 327 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 USP7Q93009 1102 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 HPDLQ96IR7 371 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 CAB39LQ9H9S4 337 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 C12orf4Q9NQ89 552 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 SAGE2PA6NJ88 616 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 MAGEB2O15479 319 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 KPNA1P52294 538 aaPredicted RBP9.5□□□□□ -0.89
VPS13A-203ENST00000360280 OLR1P78380 273 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 RBBP4Q09028 425 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 ZHX1-C8orf76Q96EF9 292 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 GPAMQ9HCL2 828 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 DDX20Q9UHI6 824 aaKnown RBP9.5□□□□□ -0.89
VPS13A-203ENST00000360280 HIST1H2ABP04908 130 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 KCNA6P17658 529 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 SLC11A2P49281 568 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 MPP3Q13368 585 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 TDRD10Q5VZ19 366 aaKnown RBP9.5□□□□□ -0.89
VPS13A-203ENST00000360280 HIST3H2AQ7L7L0 130 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 CASKIN2Q8WXE0 1202 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 HIST1H2ACQ93077 130 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 MAP3K4Q9Y6R4 1608 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 ADGRL3Q9HAR2 1447 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 PCP4L1A6NKN8 68 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 RECQL5O94762 991 aaPredicted RBP9.5□□□□□ -0.89
VPS13A-203ENST00000360280 KCNH1O95259 989 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 ACOT2P49753 483 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 MKRN4PQ13434 485 aaPredicted RBP9.5□□□□□ -0.89
VPS13A-203ENST00000360280 EPHA7Q15375 998 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 EIF2S3LQ2VIR3 472 aaKnown RBP9.5□□□□□ -0.89
VPS13A-203ENST00000360280 MTSS1LQ765P7 747 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 ANAPC2Q9UJX6 822 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 TYSND1Q2T9J0 566 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 TBC1D10CQ8IV04 446 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 SPATA5L1Q9BVQ7 753 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 EPB41L1Q9H4G0 881 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 RAVER2Q9HCJ3 691 aaKnown RBP9.5□□□□□ -0.89
VPS13A-203ENST00000360280 AGPAT5Q9NUQ2 364 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 TMEM216Q9P0N5 145 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 KCNH4Q9UQ05 1017 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.5□□□□□ -0.89
VPS13A-203ENST00000360280 LYVE1Q9Y5Y7 322 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 LSM1O15116 133 aaKnown RBP9.5□□□□□ -0.89
VPS13A-203ENST00000360280 ITGALP20701 1170 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 CRABP2P29373 138 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 CASP5P51878 434 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 GRAPQ13588 217 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 PRR5LQ6MZQ0 368 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 DAW1Q8N136 415 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 CLHC1Q8NHS4 586 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 GRAPLQ8TC17 118 aaPredicted RBP9.5□□□□□ -0.89
VPS13A-203ENST00000360280 APOPT1Q96IL0 206 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 SLC25A23Q9BV35 468 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 ERGIC3Q9Y282 383 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 CEP152O94986 1710 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 PRKAR2AP13861 404 aaKnown RBP9.5□□□□□ -0.89
VPS13A-203ENST00000360280 GPAT2Q6NUI2 795 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 C11orf63Q6NUN7 778 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 CAMKK1Q8N5S9 505 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 WRNIP1Q96S55 665 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 SERPINE1P05121 402 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 SCRN3Q0VDG4 424 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 PDIA6Q15084 440 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 SLC15A2Q16348 729 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 CYP20A1Q6UW02 462 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 UCMAQ8WVF2 138 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 THAP1Q9NVV9 213 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 TRIM10Q9UDY6 481 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 LIMD1Q9UGP4 676 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 EPN2O95208 641 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 F9P00740 461 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 ZFP69Q49AA0 526 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 DALRD3Q5D0E6 543 aaKnown RBP9.49□□□□□ -0.89
VPS13A-203ENST00000360280 INTS11Q5TA45 600 aaKnown RBP9.49□□□□□ -0.89
VPS13A-203ENST00000360280 CBWD2Q8IUF1 395 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 PDGFRBP09619 1106 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 ITGA2P17301 1181 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 LRPAP1P30533 357 aa9.49□□□□□ -0.89
VPS13A-203ENST00000360280 GCLCP48506 637 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms