RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 ZNF394Q53GI3 561 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 MAPKAPK5Q8IW41 473 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 ADGRF2Q8IZF7 708 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 PDPRQ8NCN5 879 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 TNIP2Q8NFZ5 429 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 VCPIP1Q96JH7 1222 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 LENG8Q96PV6 779 aaPredicted RBP13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 SORT1Q99523 831 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 KLHL25Q9H0H3 589 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 PNPOQ9NVS9 261 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 ANKMY1Q9P2S6 941 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 IP6K2Q9UHH9 426 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 PLOD2O00469 737 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 AIM2O14862 343 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 HTRA2O43464 458 aaPredicted RBP13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 FARP2O94887 1054 aaPredicted RBP13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 NTSR2O95665 410 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 CDKN2BP42772 138 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 GRSF1Q12849 480 aaKnown RBP eCLIP13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 NFATC3Q12968 1075 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 SELENBP1Q13228 472 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 CEACAM7Q14002 265 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 RAB39AQ14964 217 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 Q3C1V9 767 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 NHSL2Q5HYW2 709 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 SLC27A3Q5K4L6 730 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 ZNF280DQ6N043 979 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 RAVER1Q8IY67 606 aaKnown RBP13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 SIX6OS1Q8N1H7 587 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 FAM47BQ8NA70 645 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 TMEM206Q9H813 350 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 MTMR4Q9NYA4 1195 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 CXorf49A8MYA2 514 aaPredicted RBP13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 TRDMT1O14717 391 aaKnown RBP13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 RGS13O14921 159 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 MSH4O15457 936 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 GUCY1B2O75343 617 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 ENTPD3O75355 529 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 PARNO95453 639 aaKnown RBP13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 S100BP04271 92 aaPredicted RBP13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 KRT5P13647 590 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 TCF4P15884 667 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 PRKCHP24723 683 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 EIF3EP60228 445 aaKnown RBP13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 GNA12Q03113 381 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 LRP8Q14114 963 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 MAMDC4Q6UXC1 1216 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 TMEM26Q6ZUK4 368 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 CBWD1Q9BRT8 395 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 IMPG2Q9BZV3 1241 aa13.66□□□□□ -0.22
SPTSSB-201ENST00000359175 FAM86B1E9PN63 330 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 KLHL41O60662 606 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 TPPPO94811 219 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 CALCAP01258 141 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 SERPINE1P05121 402 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 FAM86B2P0C5J1 330 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 NUMBP49757 651 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 PSMC5P62195 406 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 ABCB5Q2M3G0 1257 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 VWA5B1Q5TIE3 1220 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 TTC23LQ6PF05 361 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 LRRC49Q8IUZ0 686 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 ELMOD1Q8N336 334 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 FEZF2Q8TBJ5 459 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 RSAD2Q8WXG1 361 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 TFAP2CQ92754 450 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 EGLN2Q96KS0 407 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 HOMER2Q9NSB8 354 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 HSPBP1Q9NZL4 362 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 RGSL1A5PLK6 1076 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 TTC34A8MYJ7 566 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 GRK2P25098 689 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 NLRP11P59045 1033 aaKnown RBP13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 BMPR2Q13873 1038 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 CEP55Q53EZ4 464 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 LMBRD2Q68DH5 695 aaPredicted RBP13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 SIGIRRQ6IA17 410 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 GALNT18Q6P9A2 607 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 TPH2Q8IWU9 490 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 PGAM4Q8N0Y7 254 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 LRRC47Q8N1G4 583 aaKnown RBP13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 SLC4A9Q96Q91 983 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 SLC29A1Q99808 456 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 C11orf70Q9BRQ4 267 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 DUS2Q9NX74 493 aaKnown RBP13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 SERPINA10Q9UK55 444 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 MYH9P35579 1960 aaKnown RBP13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 CROCCQ5TZA2 2017 aa13.65□□□□□ -0.22
SPTSSB-201ENST00000359175 TISP43B9A030 160 aa13.64□□□□□ -0.23
SPTSSB-201ENST00000359175 USP17L10C9JJH3 530 aa13.64□□□□□ -0.23
SPTSSB-201ENST00000359175 ZNF182P17025 639 aaPredicted RBP13.64□□□□□ -0.23
SPTSSB-201ENST00000359175 MSX2P35548 267 aaPredicted RBP13.64□□□□□ -0.23
SPTSSB-201ENST00000359175 OTUD4Q01804 1114 aaKnown RBP13.64□□□□□ -0.23
SPTSSB-201ENST00000359175 TRAF2Q12933 501 aa13.64□□□□□ -0.23
SPTSSB-201ENST00000359175 DGKDQ16760 1214 aa13.64□□□□□ -0.23
SPTSSB-201ENST00000359175 FAM117BQ6P1L5 589 aa13.64□□□□□ -0.23
SPTSSB-201ENST00000359175 TTC33Q6PID6 262 aaPredicted RBP13.64□□□□□ -0.23
SPTSSB-201ENST00000359175 ATG14Q6ZNE5 492 aa13.64□□□□□ -0.23
SPTSSB-201ENST00000359175 GET4Q7L5D6 327 aaPredicted RBP13.64□□□□□ -0.23
SPTSSB-201ENST00000359175 ENOSF1Q7L5Y1 443 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms