RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 SIX5Q8N196 739 aa13.29□□□□□ -0.28
NLRC3-202ENST00000359128 DPP10Q8N608 796 aa13.29□□□□□ -0.28
NLRC3-202ENST00000359128 C3orf20Q8ND61 904 aa13.29□□□□□ -0.28
NLRC3-202ENST00000359128 ATG4AQ8WYN0 398 aa13.29□□□□□ -0.28
NLRC3-202ENST00000359128 GAD1Q99259 594 aa13.29□□□□□ -0.28
NLRC3-202ENST00000359128 RGS18Q9NS28 235 aa13.29□□□□□ -0.28
NLRC3-202ENST00000359128 INO80Q9ULG1 1556 aaPredicted RBP13.29□□□□□ -0.28
NLRC3-202ENST00000359128 AGLP35573 1532 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 O00370 1275 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 CLK3P49761 638 aaKnown RBP13.28□□□□□ -0.28
NLRC3-202ENST00000359128 COPAP53621 1224 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 SNRPD1P62314 119 aaKnown RBP13.28□□□□□ -0.28
NLRC3-202ENST00000359128 RALGDSQ12967 914 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 DACT2Q5SW24 774 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 ADAM32Q8TC27 787 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 CXorf40BQ96DE9 158 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 ZNHIT2Q9UHR6 403 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 GYPCP04921 128 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 PRKAR2AP13861 404 aaKnown RBP13.28□□□□□ -0.28
NLRC3-202ENST00000359128 TFE3P19532 575 aaPredicted RBP13.28□□□□□ -0.28
NLRC3-202ENST00000359128 NOS3P29474 1203 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 MPP3Q13368 585 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 TKTL2Q9H0I9 626 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 FER1L4A9Z1Z3 1794 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 LRRC14BA6NHZ5 514 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 OPLAHO14841 1288 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 ACSL4O60488 711 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 RECQL4O94761 1208 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 CTDNEP1O95476 244 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 CLK2P49760 499 aaKnown RBP13.28□□□□□ -0.28
NLRC3-202ENST00000359128 ILF2Q12905 390 aaKnown RBP13.28□□□□□ -0.28
NLRC3-202ENST00000359128 PKN1Q16512 942 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 HECTD3Q5T447 861 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 AGMOQ6ZNB7 445 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 NSL1Q96IY1 281 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 SENP8Q96LD8 212 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 DEFB118Q96PH6 123 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 BBS2Q9BXC9 721 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 ENTPD4Q9Y227 616 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 LOC100653049A0A140TA62 436 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 A0A1B0GW55 424 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 ZBTB14O43829 449 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 KRT34O76011 436 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 DUX4L2P0CJ85 424 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 DUX4L3P0CJ86 424 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 DUX4L4P0CJ87 422 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 DUX4L5P0CJ88 424 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 DUX4L6P0CJ89 424 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 DUX4L7P0CJ90 424 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 FDPSP14324 419 aaKnown RBP13.28□□□□□ -0.28
NLRC3-202ENST00000359128 RRM1P23921 792 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 PEX6Q13608 980 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 TAF13Q15543 124 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 PKN2Q16513 984 aaKnown RBP13.28□□□□□ -0.28
NLRC3-202ENST00000359128 C3orf67Q6ZVT6 689 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 ZNF473Q8WTR7 871 aaKnown RBP13.28□□□□□ -0.28
NLRC3-202ENST00000359128 TMEM121Q9BTD3 319 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 FANCEQ9HB96 536 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 DUX4Q9UBX2 424 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 TBL1XO60907 577 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 POU1F1P28069 291 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 GRIK3Q13003 919 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 NR6A1Q15406 480 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 DAB2IPQ5VWQ8 1189 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 PLPP4Q5VZY2 271 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 SEL1L3Q68CR1 1132 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 TDRD5Q8NAT2 981 aaKnown RBP13.28□□□□□ -0.28
NLRC3-202ENST00000359128 INTS13Q9NVM9 706 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 MARCH2Q9P0N8 246 aa13.28□□□□□ -0.28
NLRC3-202ENST00000359128 CHURC1-FNTBB4DL54 471 aa13.27□□□□□ -0.28
NLRC3-202ENST00000359128 CXCL14O95715 111 aa13.27□□□□□ -0.28
NLRC3-202ENST00000359128 YBX3P16989 372 aaKnown RBP eCLIP13.27□□□□□ -0.28
NLRC3-202ENST00000359128 CDH17Q12864 832 aa13.27□□□□□ -0.28
NLRC3-202ENST00000359128 SPIDRQ14159 915 aa13.27□□□□□ -0.28
NLRC3-202ENST00000359128 CAPRIN2Q6IMN6 1127 aaKnown RBP13.27□□□□□ -0.28
NLRC3-202ENST00000359128 ERP27Q96DN0 273 aa13.27□□□□□ -0.28
NLRC3-202ENST00000359128 POPDC2Q9HBU9 364 aa13.27□□□□□ -0.28
NLRC3-202ENST00000359128 EIF4E1BA6NMX2 242 aaKnown RBP13.27□□□□□ -0.28
NLRC3-202ENST00000359128 FGF19O95750 216 aa13.27□□□□□ -0.28
NLRC3-202ENST00000359128 IFNA16P05015 189 aa13.27□□□□□ -0.28
NLRC3-202ENST00000359128 MMP13P45452 471 aa13.27□□□□□ -0.28
NLRC3-202ENST00000359128 CD151P48509 253 aa13.27□□□□□ -0.28
NLRC3-202ENST00000359128 ACTN3Q08043 901 aaPredicted RBP13.27□□□□□ -0.28
NLRC3-202ENST00000359128 TCEA2Q15560 299 aa13.27□□□□□ -0.28
NLRC3-202ENST00000359128 RAET1GQ6H3X3 334 aa13.27□□□□□ -0.28
NLRC3-202ENST00000359128 SERPINA13PQ6UXR4 307 aa13.27□□□□□ -0.28
NLRC3-202ENST00000359128 CYP4X1Q8N118 509 aa13.27□□□□□ -0.28
NLRC3-202ENST00000359128 SLC5A5Q92911 643 aa13.27□□□□□ -0.28
NLRC3-202ENST00000359128 WHRNQ9P202 907 aa13.27□□□□□ -0.28
NLRC3-202ENST00000359128 SEPT3Q9UH03 358 aa13.27□□□□□ -0.28
NLRC3-202ENST00000359128 POLG2Q9UHN1 485 aa13.27□□□□□ -0.28
NLRC3-202ENST00000359128 ZNF112Q9UJU3 913 aa13.27□□□□□ -0.28
NLRC3-202ENST00000359128 UQCRBP14927 111 aa13.27□□□□□ -0.29
NLRC3-202ENST00000359128 PPM1AP35813 382 aa13.27□□□□□ -0.29
NLRC3-202ENST00000359128 HPCAL1P37235 193 aa13.27□□□□□ -0.29
NLRC3-202ENST00000359128 CHRNB3Q05901 458 aa13.27□□□□□ -0.29
NLRC3-202ENST00000359128 C11orf63Q6NUN7 778 aa13.27□□□□□ -0.29
NLRC3-202ENST00000359128 MARK2Q7KZI7 788 aaKnown RBP13.27□□□□□ -0.29
NLRC3-202ENST00000359128 DSELQ8IZU8 1212 aa13.27□□□□□ -0.29
NLRC3-202ENST00000359128 ABRAQ8N0Z2 381 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms