RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 SH3BGRLO75368 114 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 ADIGQ0VDE8 80 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 CES3Q6UWW8 571 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 CAMKK1Q8N5S9 505 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 GINS4Q9BRT9 223 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 AGRPO00253 132 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 DNALI1O14645 258 aaPredicted RBP18.79■□□□□ 0.6
SHANK1-202ENST00000359082 ACAT1P24752 427 aaKnown RBP18.79■□□□□ 0.6
SHANK1-202ENST00000359082 FASP25445 335 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 SKIV2L2P42285 1042 aaKnown RBP18.79■□□□□ 0.6
SHANK1-202ENST00000359082 C16orf59Q7L2K0 433 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 LPCAT2Q7L5N7 544 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 SYTL1Q8IYJ3 562 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 TATDN2Q93075 761 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 OLFM1Q99784 485 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 TBL1YQ9BQ87 522 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 PXDNLA1KZ92 1463 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 UBOX5O94941 541 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 CYP20A1Q6UW02 462 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 POMKQ9H5K3 350 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 RAD51BO15315 384 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 FAM58BPP0C7Q3 252 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 CD151P48509 253 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 PTPN11Q06124 597 aaPredicted RBP18.79■□□□□ 0.6
SHANK1-202ENST00000359082 FASTKQ14296 549 aaKnown RBP18.79■□□□□ 0.6
SHANK1-202ENST00000359082 ARMC4Q5T2S8 1044 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 GLT6D1Q7Z4J2 308 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 GANQ9H2C0 597 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 SMIM31A0A1B0GVY4 71 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 LSM8O95777 96 aaKnown RBP18.79■□□□□ 0.6
SHANK1-202ENST00000359082 CCNG2Q16589 344 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 ZSWIM7Q19AV6 140 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 KYQ8NBH2 561 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 NLNQ9BYT8 704 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 GCLCP48506 637 aaPredicted RBP18.79■□□□□ 0.6
SHANK1-202ENST00000359082 KPNA1P52294 538 aaPredicted RBP18.79■□□□□ 0.6
SHANK1-202ENST00000359082 MAPK10P53779 464 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 SGCGQ13326 291 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 FBXO39Q8N4B4 442 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 PRKAG3Q9UGI9 489 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 ITGA11Q9UKX5 1188 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 NAALADL1Q9UQQ1 740 aa18.79■□□□□ 0.6
SHANK1-202ENST00000359082 CES2O00748 559 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 TBX4P57082 545 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 STX4Q12846 297 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 CCDC153Q494R4 210 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 ATAD3BQ5T9A4 648 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 MARC1Q5VT66 337 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 ITIH5Q86UX2 942 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 PGLYRP2Q96PD5 576 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 RXFP1Q9HBX9 757 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 A1CFQ9NQ94 594 aaKnown RBP18.78■□□□□ 0.6
SHANK1-202ENST00000359082 TCF7L2Q9NQB0 619 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 PLAGL2Q9UPG8 496 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 E7ENQ6 273 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 ITGAXP20702 1163 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 OR1E1P30953 314 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 DDI2Q5TDH0 399 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 KLHL17Q6TDP4 642 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 MPP4Q96JB8 637 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 NDUFA13Q9P0J0 144 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 SLC24A2Q9UI40 661 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 SNCAIPQ9Y6H5 919 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 UMPSP11172 480 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 PGAM1P18669 254 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 MAD2L1Q13257 205 aaPredicted RBP18.78■□□□□ 0.6
SHANK1-202ENST00000359082 MAPK11Q15759 364 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 DHFR2Q86XF0 187 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 DCLK3Q9C098 648 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 SETD4Q9NVD3 440 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 AHSPQ9NZD4 102 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 LBPP18428 481 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 CCR1P32246 355 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 SREBF1P36956 1147 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 RENBPP51606 427 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 NEDD8Q15843 81 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 RNASE11Q8TAA1 199 aaKnown RBP18.78■□□□□ 0.6
SHANK1-202ENST00000359082 ZSCAN18Q8TBC5 510 aaPredicted RBP18.78■□□□□ 0.6
SHANK1-202ENST00000359082 DCLRE1BQ9H816 532 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 LIMD1Q9UGP4 676 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 NDUFAF1Q9Y375 327 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 H3BN98 237 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 INPP4BO15327 924 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 ITPK1Q13572 414 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 CACUL1Q86Y37 369 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 CPA4Q9UI42 421 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 POLR1DQ9Y2S0 133 aa18.78■□□□□ 0.6
SHANK1-202ENST00000359082 RIPK2O43353 540 aa18.77■□□□□ 0.6
SHANK1-202ENST00000359082 ALDH2P05091 517 aa18.77■□□□□ 0.6
SHANK1-202ENST00000359082 RAG1P15918 1043 aa18.77■□□□□ 0.6
SHANK1-202ENST00000359082 SCARA3Q6AZY7 606 aa18.77■□□□□ 0.6
SHANK1-202ENST00000359082 AGBL3Q8NEM8 1001 aa18.77■□□□□ 0.6
SHANK1-202ENST00000359082 ZNF112Q9UJU3 913 aa18.77■□□□□ 0.6
SHANK1-202ENST00000359082 CROTQ9UKG9 612 aa18.77■□□□□ 0.6
SHANK1-202ENST00000359082 PCDHB12Q9Y5F1 795 aa18.77■□□□□ 0.6
SHANK1-202ENST00000359082 A0A0A6YYK5 440 aaPredicted RBP18.77■□□□□ 0.6
SHANK1-202ENST00000359082 KRT6AP02538 564 aa18.77■□□□□ 0.6
SHANK1-202ENST00000359082 KRT6BP04259 564 aa18.77■□□□□ 0.6
SHANK1-202ENST00000359082 PABPC1P11940 636 aaKnown RBP18.77■□□□□ 0.6
SHANK1-202ENST00000359082 FMO4P31512 558 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms