RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 VANGL2Q9ULK5 521 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 GLRA3O75311 464 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 LTFP02788 710 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 YBX3P16989 372 aaKnown RBP eCLIP11.5□□□□□ -0.57
SSU72-202ENST00000359060 UBR7Q8N806 425 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 NFKBIZQ9BYH8 718 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 IARS2Q9NSE4 1012 aaKnown RBP11.5□□□□□ -0.57
SSU72-202ENST00000359060 SLC12A4Q9UP95 1085 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 CDY2AQ9Y6F7 541 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 CXorf49A8MYA2 514 aaPredicted RBP11.5□□□□□ -0.57
SSU72-202ENST00000359060 MDM4O15151 490 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 FAM189A1O60320 539 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 HNRNPCL1O60812 293 aaKnown RBP11.5□□□□□ -0.57
SSU72-202ENST00000359060 LUC7L3O95232 432 aaKnown RBP11.5□□□□□ -0.57
SSU72-202ENST00000359060 CYP3A5P20815 502 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 AVPR1AP37288 418 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 LHX1P48742 406 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 MRPS5P82675 430 aaKnown RBP11.5□□□□□ -0.57
SSU72-202ENST00000359060 INCA1Q0VD86 236 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 MAP2K5Q13163 448 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 ITGA9Q13797 1035 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 SLC25A41Q8N5S1 370 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 NPLOC4Q8TAT6 608 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 SLC35F5Q8WV83 523 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 OXNAD1Q96HP4 312 aaPredicted RBP11.5□□□□□ -0.57
SSU72-202ENST00000359060 NAT9Q9BTE0 207 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 TKTL2Q9H0I9 626 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 ATXN3LQ9H3M9 355 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 DTLQ9NZJ0 730 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 FARP1Q9Y4F1 1045 aaPredicted RBP11.5□□□□□ -0.57
SSU72-202ENST00000359060 KIAA1217Q5T5P2 1943 aa11.5□□□□□ -0.57
SSU72-202ENST00000359060 SMIM35A0A1B0GVV1 85 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 BCLAF3A2AJT9 711 aaKnown RBP11.49□□□□□ -0.57
SSU72-202ENST00000359060 SLC15A5A6NIM6 579 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 ABLIM1O14639 778 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 ENTPD5O75356 428 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 GPC4O75487 556 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 LMNAP02545 664 aaKnown RBP11.49□□□□□ -0.57
SSU72-202ENST00000359060 CDC25CP30307 473 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 RCN1Q15293 331 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 FAM110CQ1W6H9 321 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 SLC25A52Q3SY17 297 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 TMEM110Q86TL2 294 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 UNC5BQ8IZJ1 945 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 MPP5Q8N3R9 675 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 SLC4A5Q9BY07 1137 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 DUSP16Q9BY84 665 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 MFHAS1Q9Y4C4 1052 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 GLTPD2A6NH11 291 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 TPP1O14773 563 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 MAP3K7O43318 606 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 GSTA2P09210 222 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 L1CAMP32004 1257 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 CDK16Q00536 496 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 CUL3Q13618 768 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 RELL1Q8IUW5 271 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 TEX9Q8N6V9 391 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 PQLC3Q8N755 202 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 BANPQ8N9N5 519 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 DCAKDQ8WVC6 231 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 RRAGCQ9HB90 399 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 ARHGEF4Q9NR80 690 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 GTSE1Q9NYZ3 720 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 SLC17A6Q9P2U8 582 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 MID2Q9UJV3 735 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 ST3GAL5Q9UNP4 418 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 DERAQ9Y315 318 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 PHIPQ8WWQ0 1821 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 C2CD2LO14523 706 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 XPO1O14980 1071 aaKnown RBP11.49□□□□□ -0.57
SSU72-202ENST00000359060 CRCPO75575 148 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 ODC1P11926 461 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 LRRC36Q1X8D7 754 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 POU5F2Q8N7G0 328 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.49□□□□□ -0.57
SSU72-202ENST00000359060 PTPRN2Q92932 1015 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 LOXHD1Q8IVV2 1947 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 LOC102724159A0A0B4J2E5 919 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 ARHGEF37A1IGU5 675 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 FBXO21O94952 628 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 CSH1P0DML2 217 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 CSH2P0DML3 217 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 SKIP12755 728 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 TSHRP16473 764 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 OR1G1P47890 313 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 POU6F1Q14863 301 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 PWP2Q15269 919 aaKnown RBP11.49□□□□□ -0.57
SSU72-202ENST00000359060 CCL14Q16627 93 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 ACCSLQ4AC99 568 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 TAF2Q6P1X5 1199 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 CLNKQ7Z7G1 428 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 ALYREFQ86V81 257 aaKnown RBP11.49□□□□□ -0.57
SSU72-202ENST00000359060 AFAP1L2Q8N4X5 818 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 SLC26A7Q8TE54 656 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 KCNK16Q96T55 309 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 VCXQ9H320 206 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 XPNPEP3Q9NQH7 507 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 OR12D3Q9UGF7 316 aa11.49□□□□□ -0.57
SSU72-202ENST00000359060 DOCK5Q9H7D0 1870 aa11.48□□□□□ -0.57
SSU72-202ENST00000359060 F9P00740 461 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms