RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 DCLK1O15075 740 aa15.37■□□□□ 0.05
GABPB1-202ENST00000359031 TM9SF1O15321 606 aa15.37■□□□□ 0.05
GABPB1-202ENST00000359031 B3GAT3O94766 335 aa15.37■□□□□ 0.05
GABPB1-202ENST00000359031 F9P00740 461 aa15.37■□□□□ 0.05
GABPB1-202ENST00000359031 POMCP01189 267 aa15.37■□□□□ 0.05
GABPB1-202ENST00000359031 MLNP12872 115 aa15.37■□□□□ 0.05
GABPB1-202ENST00000359031 CCL5P13501 91 aa15.37■□□□□ 0.05
GABPB1-202ENST00000359031 KRT4P19013 534 aa15.37■□□□□ 0.05
GABPB1-202ENST00000359031 PRKCHP24723 683 aa15.37■□□□□ 0.05
GABPB1-202ENST00000359031 ADRA1BP35368 520 aa15.37■□□□□ 0.05
GABPB1-202ENST00000359031 HCAR3P49019 387 aa15.37■□□□□ 0.05
GABPB1-202ENST00000359031 CACNA2D1P54289 1103 aa15.37■□□□□ 0.05
GABPB1-202ENST00000359031 MTM1Q13496 603 aa15.37■□□□□ 0.05
GABPB1-202ENST00000359031 ITGA7Q13683 1181 aa15.37■□□□□ 0.05
GABPB1-202ENST00000359031 MAPRE1Q15691 268 aaKnown RBP15.37■□□□□ 0.05
GABPB1-202ENST00000359031 PDK4Q16654 411 aa15.37■□□□□ 0.05
GABPB1-202ENST00000359031 ARL13BQ3SXY8 428 aa15.37■□□□□ 0.05
GABPB1-202ENST00000359031 KBTBD12Q3ZCT8 623 aa15.37■□□□□ 0.05
GABPB1-202ENST00000359031 ANKRD20A2Q5SQ80 823 aa15.37■□□□□ 0.05
GABPB1-202ENST00000359031 ANKRD20A1Q5TYW2 823 aa15.37■□□□□ 0.05
GABPB1-202ENST00000359031 ANKRD20A3Q5VUR7 823 aa15.37■□□□□ 0.05
GABPB1-202ENST00000359031 ZNF534Q76KX8 674 aa15.37■□□□□ 0.05
GABPB1-202ENST00000359031 BHLHA9Q7RTU4 235 aa15.37■□□□□ 0.05
GABPB1-202ENST00000359031 SPATA21Q7Z572 469 aa15.37■□□□□ 0.05
GABPB1-202ENST00000359031 MICALL1Q8N3F8 863 aa15.37■□□□□ 0.05
GABPB1-202ENST00000359031 WDR6Q9NNW5 1121 aaKnown RBP15.37■□□□□ 0.05
GABPB1-202ENST00000359031 COX16Q9P0S2 106 aa15.37■□□□□ 0.05
GABPB1-202ENST00000359031 ZNF180Q9UJW8 692 aa15.37■□□□□ 0.05
GABPB1-202ENST00000359031 MFHAS1Q9Y4C4 1052 aa15.37■□□□□ 0.05
GABPB1-202ENST00000359031 AVILO75366 819 aa15.36■□□□□ 0.05
GABPB1-202ENST00000359031 MYCNP04198 464 aaPredicted RBP15.36■□□□□ 0.05
GABPB1-202ENST00000359031 GSTA1P08263 222 aa15.36■□□□□ 0.05
GABPB1-202ENST00000359031 USP17L7P0C7H9 530 aa15.36■□□□□ 0.05
GABPB1-202ENST00000359031 NCAM1P13591 858 aa15.36■□□□□ 0.05
GABPB1-202ENST00000359031 TYMPP19971 482 aa15.36■□□□□ 0.05
GABPB1-202ENST00000359031 FOXN2P32314 431 aa15.36■□□□□ 0.05
GABPB1-202ENST00000359031 RPA3P35244 121 aaPredicted RBP15.36■□□□□ 0.05
GABPB1-202ENST00000359031 GJA8P48165 433 aa15.36■□□□□ 0.05
GABPB1-202ENST00000359031 SEMA3BQ13214 749 aa15.36■□□□□ 0.05
GABPB1-202ENST00000359031 SYCP2LQ5T4T6 812 aa15.36■□□□□ 0.05
GABPB1-202ENST00000359031 HHATQ5VTY9 493 aa15.36■□□□□ 0.05
GABPB1-202ENST00000359031 CD300LGQ6UXG3 332 aa15.36■□□□□ 0.05
GABPB1-202ENST00000359031 RNF180Q86T96 592 aa15.36■□□□□ 0.05
GABPB1-202ENST00000359031 SLC26A11Q86WA9 606 aa15.36■□□□□ 0.05
GABPB1-202ENST00000359031 ECHDC2Q86YB7 292 aa15.36■□□□□ 0.05
GABPB1-202ENST00000359031 RSPH1Q8WYR4 309 aa15.36■□□□□ 0.05
GABPB1-202ENST00000359031 APBB2Q92870 758 aa15.36■□□□□ 0.05
GABPB1-202ENST00000359031 KCNK16Q96T55 309 aa15.36■□□□□ 0.05
GABPB1-202ENST00000359031 PKMYT1Q99640 499 aa15.36■□□□□ 0.05
GABPB1-202ENST00000359031 PAIP2Q9BPZ3 127 aaKnown RBP15.36■□□□□ 0.05
GABPB1-202ENST00000359031 DMAP1Q9NPF5 467 aaPredicted RBP15.36■□□□□ 0.05
GABPB1-202ENST00000359031 TMEM30AQ9NV96 361 aa15.36■□□□□ 0.05
GABPB1-202ENST00000359031 FBXW11Q9UKB1 542 aa15.36■□□□□ 0.05
GABPB1-202ENST00000359031 ARL2BPQ9Y2Y0 163 aa15.36■□□□□ 0.05
GABPB1-202ENST00000359031 TRIOBPQ9H2D6 2365 aa15.36■□□□□ 0.05
GABPB1-202ENST00000359031 RNF103O00237 685 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 CREB3O43889 395 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 FAM155BO75949 473 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 APOEP02649 317 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 C1QAP02745 245 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 MT-ND3P03897 115 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 ALADP13716 330 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 TPI1P60174 286 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 ZKSCAN8Q15776 578 aaPredicted RBP15.35■□□□□ 0.05
GABPB1-202ENST00000359031 PM20D1Q6GTS8 502 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 DENND5BQ6ZUT9 1274 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 BEND5Q7L4P6 421 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 TRPM8Q7Z2W7 1104 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 ZNF598Q86UK7 904 aaKnown RBP15.35■□□□□ 0.05
GABPB1-202ENST00000359031 THEM5Q8N1Q8 247 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 GSDMBQ8TAX9 411 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 LRRN4Q8WUT4 740 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 SUSD3Q96L08 255 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 EBNA1BP2Q99848 306 aaKnown RBP15.35■□□□□ 0.05
GABPB1-202ENST00000359031 DDIT4Q9NX09 232 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 INPP5FQ9Y2H2 1132 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 CAPN7Q9Y6W3 813 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 I3L4J1 428 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 NCAM2O15394 837 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 ELNP15502 786 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 BRCC3P46736 316 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 TSPY1Q01534 308 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 AP1B1Q10567 949 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 SLC1A5Q15758 541 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 MAP3K21Q5TCX8 1036 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 TTC39BQ5VTQ0 682 aaPredicted RBP15.35■□□□□ 0.05
GABPB1-202ENST00000359031 OVOS1Q6IE37 1185 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 DCLRE1AQ6PJP8 1040 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 LRRC6Q86X45 466 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 BANPQ8N9N5 519 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 LRRC8CQ8TDW0 803 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 P2RY11Q96G91 374 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 APOPT1Q96IL0 206 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 SIGLEC10Q96LC7 697 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 LGMNQ99538 433 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 BRD8Q9H0E9 1235 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 TMPRSS4Q9NRS4 437 aa15.35■□□□□ 0.05
GABPB1-202ENST00000359031 TRMT13Q9NUP7 481 aaKnown RBP15.35■□□□□ 0.05
GABPB1-202ENST00000359031 CXCR3P49682 368 aa15.34■□□□□ 0.05
GABPB1-202ENST00000359031 ACLYP53396 1101 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms