RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 MYO7AQ13402 2215 aa13.08□□□□□ -0.32
GGPS1-202ENST00000358966 TBKBP1A7MCY6 615 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 MGRN1O60291 552 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 AVILO75366 819 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 ATP6V1G2O95670 118 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 NOS2P35228 1153 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 SLC11A1P49279 550 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 MAGOHP61326 146 aaKnown RBP13.07□□□□□ -0.32
GGPS1-202ENST00000358966 TSPY1Q01534 308 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 BFSP2Q13515 415 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 RAB41Q5JT25 222 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 VARS2Q5ST30 1063 aaKnown RBP13.07□□□□□ -0.32
GGPS1-202ENST00000358966 RNASEH2BQ5TBB1 312 aaKnown RBP13.07□□□□□ -0.32
GGPS1-202ENST00000358966 BSPRYQ5W0U4 402 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 SYDE1Q6ZW31 735 aaPredicted RBP13.07□□□□□ -0.32
GGPS1-202ENST00000358966 SPATA2LQ8IUW3 424 aaPredicted RBP13.07□□□□□ -0.32
GGPS1-202ENST00000358966 MAP7D3Q8IWC1 876 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 GALNT15Q8N3T1 639 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 LGMNQ99538 433 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 PCDH9Q9HC56 1237 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 WDR6Q9NNW5 1121 aaKnown RBP13.07□□□□□ -0.32
GGPS1-202ENST00000358966 DMAP1Q9NPF5 467 aaPredicted RBP13.07□□□□□ -0.32
GGPS1-202ENST00000358966 SFMBT1Q9UHJ3 866 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 FZD10Q9ULW2 581 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 ATP11BQ9Y2G3 1177 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 SLC27A5Q9Y2P5 690 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 GOLGA6L10A6NI86 522 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 MFSD11O43934 449 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 CAPN15O75808 1086 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 ARHGEF6Q15052 776 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 FNBP1LQ5T0N5 605 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 NCBP2-AS2Q69YL0 99 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 TEKT4Q8WW24 435 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 SLC2A13Q96QE2 648 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 CRISPLD1Q9H336 500 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 MARCH5Q9NX47 278 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.07□□□□□ -0.32
GGPS1-202ENST00000358966 TBK1Q9UHD2 729 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 LRFN2Q9ULH4 789 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 DRG1Q9Y295 367 aaKnown RBP13.07□□□□□ -0.32
GGPS1-202ENST00000358966 EFR3BQ9Y2G0 817 aa13.07□□□□□ -0.32
GGPS1-202ENST00000358966 A6NHS1 94 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 RPL17P18621 184 aaKnown RBP13.06□□□□□ -0.32
GGPS1-202ENST00000358966 NR1D1P20393 614 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 USP46P62068 366 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 SKOR1P84550 965 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 CCDC15Q0P6D6 951 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 PDK2Q15119 407 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 RTP2Q5QGT7 225 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 SLC9A4Q6AI14 798 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 STRADAQ7RTN6 431 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 TAC4Q86UU9 113 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 ZBED8Q8IZ13 594 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 PRCCQ92733 491 aaPredicted RBP13.06□□□□□ -0.32
GGPS1-202ENST00000358966 NT5C3BQ969T7 300 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 WDR83Q9BRX9 315 aaKnown RBP13.06□□□□□ -0.32
GGPS1-202ENST00000358966 USP29Q9HBJ7 922 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 CSNK1G1Q9HCP0 422 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 CYLDQ9NQC7 956 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 CNGB3Q9NQW8 809 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 ARHGEF4Q9NR80 690 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 PIH1D1Q9NWS0 290 aaKnown RBP13.06□□□□□ -0.32
GGPS1-202ENST00000358966 SAGE1Q9NXZ1 904 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 OGDHLQ9ULD0 1010 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 L3MBTL1Q9Y468 752 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 EIF4E1BA6NMX2 242 aaKnown RBP13.06□□□□□ -0.32
GGPS1-202ENST00000358966 CUL3Q13618 768 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 BLMHQ13867 455 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 PRSS55Q6UWB4 352 aaPredicted RBP13.06□□□□□ -0.32
GGPS1-202ENST00000358966 THEM5Q8N1Q8 247 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 MDM1Q8TC05 714 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 RNF139Q8WU17 664 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 DEPDC1BQ8WUY9 529 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 TRIM56Q9BRZ2 755 aaKnown RBP13.06□□□□□ -0.32
GGPS1-202ENST00000358966 ZNF670Q9BS34 389 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 DNAI2Q9GZS0 605 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 EPN3Q9H201 632 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 NMUR1Q9HB89 426 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 OSER1Q9NX31 292 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 DTLQ9NZJ0 730 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 SUN2Q9UH99 717 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 ADAM28Q9UKQ2 775 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 USP3Q9Y6I4 520 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 SHROOM3Q8TF72 1996 aa13.06□□□□□ -0.32
GGPS1-202ENST00000358966 MYO16Q9Y6X6 1858 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 C2CD2LO14523 706 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 CREB1P16220 341 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 DESP17661 470 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 ITGB8P26012 769 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 LMNB2Q03252 620 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 MPP3Q13368 585 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 TFDP2Q14188 446 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 SLMAPQ14BN4 828 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 SMYD5Q6GMV2 418 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 KCNT2Q6UVM3 1135 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 C6orf89Q6UWU4 347 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 LRIG3Q6UXM1 1119 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 SLC39A5Q6ZMH5 540 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 TTC13Q8NBP0 860 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 UROC1Q96N76 676 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms